RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 ZNF804AQ7Z570 1209 aa9.07□□□□□ -0.96
SH3D19-203ENST00000409598 GJD4Q96KN9 370 aaPredicted RBP9.07□□□□□ -0.96
SH3D19-203ENST00000409598 XBP1P17861 261 aa9.06□□□□□ -0.96
SH3D19-203ENST00000409598 ZBTB3Q9H5J0 574 aa9.06□□□□□ -0.96
SH3D19-203ENST00000409598 ATF5Q9Y2D1 282 aaPredicted RBP9.06□□□□□ -0.96
SH3D19-203ENST00000409598 EMILIN1Q9Y6C2 1016 aa9.06□□□□□ -0.96
SH3D19-203ENST00000409598 TRIM44Q96DX7 344 aaPredicted RBP9.06□□□□□ -0.96
SH3D19-203ENST00000409598 IPO9Q96P70 1041 aaKnown RBP9.06□□□□□ -0.96
SH3D19-203ENST00000409598 CWC25Q9NXE8 425 aaPredicted RBP9.06□□□□□ -0.96
SH3D19-203ENST00000409598 SAMD9Q5K651 1589 aa9.06□□□□□ -0.96
SH3D19-203ENST00000409598 CFAP43Q8NDM7 1665 aa9.06□□□□□ -0.96
SH3D19-203ENST00000409598 CLASP1Q7Z460 1538 aa9.06□□□□□ -0.96
SH3D19-203ENST00000409598 NRDCO43847 1150 aa9.06□□□□□ -0.96
SH3D19-203ENST00000409598 BAG3O95817 575 aa9.06□□□□□ -0.96
SH3D19-203ENST00000409598 USP5P45974 858 aa9.06□□□□□ -0.96
SH3D19-203ENST00000409598 PARP10Q53GL7 1025 aa9.06□□□□□ -0.96
SH3D19-203ENST00000409598 DDX17Q92841 729 aaKnown RBP9.06□□□□□ -0.96
SH3D19-203ENST00000409598 CCDC47Q96A33 483 aaKnown RBP9.06□□□□□ -0.96
SH3D19-203ENST00000409598 BRMS1Q9HCU9 246 aa9.06□□□□□ -0.96
SH3D19-203ENST00000409598 ANKRD36BQ8N2N9 1353 aa9.06□□□□□ -0.96
SH3D19-203ENST00000409598 RBM26Q5T8P6 1007 aaKnown RBP9.06□□□□□ -0.96
SH3D19-203ENST00000409598 BRINP3Q76B58 766 aa9.06□□□□□ -0.96
SH3D19-203ENST00000409598 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.06□□□□□ -0.96
SH3D19-203ENST00000409598 ARAP3Q8WWN8 1544 aa9.06□□□□□ -0.96
SH3D19-203ENST00000409598 B4DLN1 442 aa9.05□□□□□ -0.96
SH3D19-203ENST00000409598 HIP1O00291 1037 aa9.05□□□□□ -0.96
SH3D19-203ENST00000409598 POLR3DP05423 398 aaPredicted RBP9.05□□□□□ -0.96
SH3D19-203ENST00000409598 MRPL12P52815 198 aaKnown RBP9.05□□□□□ -0.96
SH3D19-203ENST00000409598 PPP4R3BQ5MIZ7 849 aa9.05□□□□□ -0.96
SH3D19-203ENST00000409598 DZIP1LQ8IYY4 767 aaKnown RBP9.05□□□□□ -0.96
SH3D19-203ENST00000409598 MYD88Q99836 296 aa9.05□□□□□ -0.96
SH3D19-203ENST00000409598 ANKRD2Q9GZV1 360 aa9.05□□□□□ -0.96
SH3D19-203ENST00000409598 SPDYE4A6NLX3 237 aa9.05□□□□□ -0.96
SH3D19-203ENST00000409598 SURF6O75683 361 aaKnown RBP9.05□□□□□ -0.96
SH3D19-203ENST00000409598 ZNF710Q8N1W2 664 aa9.05□□□□□ -0.96
SH3D19-203ENST00000409598 ABCF2Q9UG63 623 aa9.05□□□□□ -0.96
SH3D19-203ENST00000409598 MYO5CQ9NQX4 1742 aa9.05□□□□□ -0.96
SH3D19-203ENST00000409598 GNAI2P04899 355 aa9.05□□□□□ -0.96
SH3D19-203ENST00000409598 ABCC11Q96J66 1382 aa9.05□□□□□ -0.96
SH3D19-203ENST00000409598 LRRFIP2Q9Y608 721 aaKnown RBP9.04□□□□□ -0.96
SH3D19-203ENST00000409598 KIF7Q2M1P5 1343 aa9.04□□□□□ -0.96
SH3D19-203ENST00000409598 KDM5CP41229 1560 aa9.04□□□□□ -0.96
SH3D19-203ENST00000409598 NOL8Q76FK4 1167 aaKnown RBP9.04□□□□□ -0.96
SH3D19-203ENST00000409598 ZNF428Q96B54 188 aa9.04□□□□□ -0.96
SH3D19-203ENST00000409598 KIAA2012Q0VF49 1180 aa9.04□□□□□ -0.96
SH3D19-203ENST00000409598 CRBNQ96SW2 442 aa9.04□□□□□ -0.96
SH3D19-203ENST00000409598 ZNF526Q8TF50 670 aaPredicted RBP9.03□□□□□ -0.96
SH3D19-203ENST00000409598 CCDC85AQ96PX6 553 aaPredicted RBP9.03□□□□□ -0.96
SH3D19-203ENST00000409598 VTI1AQ96AJ9 217 aa9.03□□□□□ -0.96
SH3D19-203ENST00000409598 SAFBQ15424 915 aaKnown RBP eCLIP9.03□□□□□ -0.96
SH3D19-203ENST00000409598 CARD10Q9BWT7 1032 aa9.03□□□□□ -0.96
SH3D19-203ENST00000409598 MTMR7Q9Y216 660 aa9.03□□□□□ -0.96
SH3D19-203ENST00000409598 ABCC1P33527 1531 aa9.03□□□□□ -0.96
SH3D19-203ENST00000409598 CT47B1P0C2W7 299 aaPredicted RBP9.03□□□□□ -0.96
SH3D19-203ENST00000409598 HSCBQ8IWL3 235 aa9.03□□□□□ -0.96
SH3D19-203ENST00000409598 DNAJC2Q99543 621 aaKnown RBP9.03□□□□□ -0.96
SH3D19-203ENST00000409598 PZPP20742 1482 aa9.03□□□□□ -0.96
SH3D19-203ENST00000409598 DALRD3Q5D0E6 543 aaKnown RBP9.03□□□□□ -0.96
SH3D19-203ENST00000409598 C2CD5Q86YS7 1000 aa9.03□□□□□ -0.96
SH3D19-203ENST00000409598 FSD1Q9BTV5 496 aa9.03□□□□□ -0.96
SH3D19-203ENST00000409598 VEZTQ9HBM0 779 aa9.03□□□□□ -0.96
SH3D19-203ENST00000409598 MSL1Q68DK7 614 aa9.02□□□□□ -0.97
SH3D19-203ENST00000409598 FAM184AQ8NB25 1140 aa9.02□□□□□ -0.97
SH3D19-203ENST00000409598 KDM4FA0A1W2PPD8 638 aa9.02□□□□□ -0.97
SH3D19-203ENST00000409598 DCPSQ96C86 337 aaKnown RBP9.02□□□□□ -0.97
SH3D19-203ENST00000409598 NSFL1CQ9UNZ2 370 aaKnown RBP9.02□□□□□ -0.97
SH3D19-203ENST00000409598 ANKRD45Q5TZF3 282 aa9.02□□□□□ -0.97
SH3D19-203ENST00000409598 DPP8Q6V1X1 898 aaPredicted RBP9.02□□□□□ -0.97
SH3D19-203ENST00000409598 PRM3Q9NNZ6 103 aa9.02□□□□□ -0.97
SH3D19-203ENST00000409598 PLEKHG3A1L390 1219 aa9.01□□□□□ -0.97
SH3D19-203ENST00000409598 HOXC9P31274 260 aa9.01□□□□□ -0.97
SH3D19-203ENST00000409598 DUSP27Q5VZP5 1158 aa9.01□□□□□ -0.97
SH3D19-203ENST00000409598 IL27Q8NEV9 243 aa9.01□□□□□ -0.97
SH3D19-203ENST00000409598 ABT1Q9ULW3 272 aaKnown RBP9.01□□□□□ -0.97
SH3D19-203ENST00000409598 ERVK-7P63135 1459 aa9.01□□□□□ -0.97
SH3D19-203ENST00000409598 TRAF1Q13077 416 aa9.01□□□□□ -0.97
SH3D19-203ENST00000409598 TNIP1Q15025 636 aa9.01□□□□□ -0.97
SH3D19-203ENST00000409598 KDM2BQ8NHM5 1336 aa9.01□□□□□ -0.97
SH3D19-203ENST00000409598 MAP3K12Q12852 859 aa9.01□□□□□ -0.97
SH3D19-203ENST00000409598 GPBP1L1Q9HC44 474 aaPredicted RBP9.01□□□□□ -0.97
SH3D19-203ENST00000409598 ERVV-2B6SEH9 535 aa9.01□□□□□ -0.97
SH3D19-203ENST00000409598 L1TD1Q5T7N2 865 aaKnown RBP9.01□□□□□ -0.97
SH3D19-203ENST00000409598 SULF1Q8IWU6 871 aa9.01□□□□□ -0.97
SH3D19-203ENST00000409598 PRKRIP1Q9H875 184 aaPredicted RBP9.01□□□□□ -0.97
SH3D19-203ENST00000409598 EHMT1Q9H9B1 1298 aa9.01□□□□□ -0.97
SH3D19-203ENST00000409598 AAMPQ13685 434 aa9□□□□□ -0.97
SH3D19-203ENST00000409598 MCM10Q7L590 875 aa9□□□□□ -0.97
SH3D19-203ENST00000409598 ILDR1Q86SU0 546 aaPredicted RBP9□□□□□ -0.97
SH3D19-203ENST00000409598 SF3A1Q15459 793 aaKnown RBP9□□□□□ -0.97
SH3D19-203ENST00000409598 CC2D2BQ6DHV5 1058 aa9□□□□□ -0.97
SH3D19-203ENST00000409598 CEP89Q96ST8 783 aa9□□□□□ -0.97
SH3D19-203ENST00000409598 MAST3O60307 1309 aa9□□□□□ -0.97
SH3D19-203ENST00000409598 TDO2P48775 406 aa9□□□□□ -0.97
SH3D19-203ENST00000409598 SLC27A3Q5K4L6 730 aa9□□□□□ -0.97
SH3D19-203ENST00000409598 LDHAL6AQ6ZMR3 332 aa9□□□□□ -0.97
SH3D19-203ENST00000409598 CNTROBQ8N137 903 aa9□□□□□ -0.97
SH3D19-203ENST00000409598 TPRNQ4KMQ1 711 aa9□□□□□ -0.97
SH3D19-203ENST00000409598 HSP90AB2PQ58FF8 381 aa9□□□□□ -0.97
SH3D19-203ENST00000409598 PSDA5PKW4 1024 aaPredicted RBP8.99□□□□□ -0.97
SH3D19-203ENST00000409598 WDR63Q8IWG1 891 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms