RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 COL5A3P25940 1745 aaPredicted RBP21.12■□□□□ 0.97
GDPD3-202ENST00000406256 SLC52A2Q9HAB3 445 aa21.12■□□□□ 0.97
GDPD3-202ENST00000406256 QSER1Q2KHR3 1735 aa21.12■□□□□ 0.97
GDPD3-202ENST00000406256 KCNQ4P56696 695 aa21.11■□□□□ 0.97
GDPD3-202ENST00000406256 NFATC2IPQ8NCF5 419 aa21.11■□□□□ 0.97
GDPD3-202ENST00000406256 TJP1Q07157 1748 aa21.11■□□□□ 0.97
GDPD3-202ENST00000406256 CABP4P57796 275 aa21.1■□□□□ 0.97
GDPD3-202ENST00000406256 KCPQ6ZWJ8 1503 aa21.1■□□□□ 0.97
GDPD3-202ENST00000406256 CASZ1Q86V15 1759 aa21.1■□□□□ 0.97
GDPD3-202ENST00000406256 WDR43Q15061 677 aaKnown RBP eCLIP21.1■□□□□ 0.97
GDPD3-202ENST00000406256 NFE2L2Q16236 605 aa21.1■□□□□ 0.97
GDPD3-202ENST00000406256 PNISRQ8TF01 805 aaKnown RBP21.1■□□□□ 0.97
GDPD3-202ENST00000406256 CCDC146Q8IYE0 955 aa21.09■□□□□ 0.97
GDPD3-202ENST00000406256 SLC4A9Q96Q91 983 aa21.09■□□□□ 0.97
GDPD3-202ENST00000406256 C4BP0C0L5 1744 aa21.08■□□□□ 0.97
GDPD3-202ENST00000406256 MYH14Q7Z406 1995 aaKnown RBP21.08■□□□□ 0.96
GDPD3-202ENST00000406256 SLC27A3Q5K4L6 730 aa21.08■□□□□ 0.96
GDPD3-202ENST00000406256 SMARCC1Q92922 1105 aaPredicted RBP21.08■□□□□ 0.96
GDPD3-202ENST00000406256 UBR3Q6ZT12 1888 aa21.07■□□□□ 0.96
GDPD3-202ENST00000406256 KDM3BQ7LBC6 1761 aa21.07■□□□□ 0.96
GDPD3-202ENST00000406256 DCTN1Q14203 1278 aa21.07■□□□□ 0.96
GDPD3-202ENST00000406256 MRS2Q9HD23 443 aa21.07■□□□□ 0.96
GDPD3-202ENST00000406256 HTATSF1O43719 755 aaKnown RBP21.06■□□□□ 0.96
GDPD3-202ENST00000406256 ZNF827Q17R98 1081 aa21.06■□□□□ 0.96
GDPD3-202ENST00000406256 MCM10Q7L590 875 aa21.06■□□□□ 0.96
GDPD3-202ENST00000406256 PNNQ9H307 717 aaKnown RBP21.06■□□□□ 0.96
GDPD3-202ENST00000406256 CCNL1Q9UK58 526 aaPredicted RBP21.06■□□□□ 0.96
GDPD3-202ENST00000406256 MAPK8IP3Q9UPT6 1336 aa21.06■□□□□ 0.96
GDPD3-202ENST00000406256 TMPOP42166 694 aaKnown RBP21.05■□□□□ 0.96
GDPD3-202ENST00000406256 RUNDC1Q96C34 613 aa21.05■□□□□ 0.96
GDPD3-202ENST00000406256 LOC102724428A0A0B4J2F2 783 aa21.04■□□□□ 0.96
GDPD3-202ENST00000406256 PSDA5PKW4 1024 aaPredicted RBP21.04■□□□□ 0.96
GDPD3-202ENST00000406256 SIK1P57059 783 aa21.04■□□□□ 0.96
GDPD3-202ENST00000406256 ITPK1Q13572 414 aa21.04■□□□□ 0.96
GDPD3-202ENST00000406256 R3HDM1Q15032 1099 aaKnown RBP21.04■□□□□ 0.96
GDPD3-202ENST00000406256 AKT1S1Q96B36 256 aa21.04■□□□□ 0.96
GDPD3-202ENST00000406256 SLC39A6Q13433 755 aa21.03■□□□□ 0.96
GDPD3-202ENST00000406256 SLC15A2Q16348 729 aa21.02■□□□□ 0.96
GDPD3-202ENST00000406256 LINC00116Q8NCU8 138 aa21.01■□□□□ 0.95
GDPD3-202ENST00000406256 THUMPD2Q9BTF0 503 aaKnown RBP21.01■□□□□ 0.95
GDPD3-202ENST00000406256 RRP7AQ9Y3A4 280 aaKnown RBP21.01■□□□□ 0.95
GDPD3-202ENST00000406256 NEFMP07197 916 aa21■□□□□ 0.95
GDPD3-202ENST00000406256 TEFQ10587 303 aa21■□□□□ 0.95
GDPD3-202ENST00000406256 TRIM35Q9UPQ4 493 aa21■□□□□ 0.95
GDPD3-202ENST00000406256 RIPK4P57078 832 aa20.99■□□□□ 0.95
GDPD3-202ENST00000406256 NBPF14Q5TI25 921 aa20.99■□□□□ 0.95
GDPD3-202ENST00000406256 RTF1Q92541 710 aaKnown RBP20.99■□□□□ 0.95
GDPD3-202ENST00000406256 PDGFDQ9GZP0 370 aaPredicted RBP20.99■□□□□ 0.95
GDPD3-202ENST00000406256 COL24A1Q17RW2 1714 aa20.99■□□□□ 0.95
GDPD3-202ENST00000406256 KCNQ3O43525 872 aa20.98■□□□□ 0.95
GDPD3-202ENST00000406256 AMIGO3Q86WK7 504 aa20.98■□□□□ 0.95
GDPD3-202ENST00000406256 APAF1O14727 1248 aa20.97■□□□□ 0.95
GDPD3-202ENST00000406256 PTCD1O75127 700 aaKnown RBP20.97■□□□□ 0.95
GDPD3-202ENST00000406256 ATP6V1AP38606 617 aa20.97■□□□□ 0.95
GDPD3-202ENST00000406256 DIEXFQ68CQ4 756 aaKnown RBP20.97■□□□□ 0.95
GDPD3-202ENST00000406256 RBM42Q9BTD8 480 aaKnown RBP20.97■□□□□ 0.95
GDPD3-202ENST00000406256 STK32BQ9NY57 414 aa20.97■□□□□ 0.95
GDPD3-202ENST00000406256 ZNF790Q6PG37 636 aa20.97■□□□□ 0.95
GDPD3-202ENST00000406256 PNPLA7Q6ZV29 1317 aa20.96■□□□□ 0.95
GDPD3-202ENST00000406256 LRP5O75197 1615 aa20.95■□□□□ 0.94
GDPD3-202ENST00000406256 ZNF496Q96IT1 587 aaPredicted RBP20.95■□□□□ 0.94
GDPD3-202ENST00000406256 C4AP0C0L4 1744 aa20.95■□□□□ 0.94
GDPD3-202ENST00000406256 BTBD11A6QL63 1104 aa20.94■□□□□ 0.94
GDPD3-202ENST00000406256 NEUROD2Q15784 382 aa20.94■□□□□ 0.94
GDPD3-202ENST00000406256 LAMB4A4D0S4 1761 aa20.93■□□□□ 0.94
GDPD3-202ENST00000406256 CCER2I3L3R5 266 aa20.93■□□□□ 0.94
GDPD3-202ENST00000406256 TAF7Q15545 349 aaPredicted RBP20.93■□□□□ 0.94
GDPD3-202ENST00000406256 HEG1Q9ULI3 1381 aa20.93■□□□□ 0.94
GDPD3-202ENST00000406256 DNAJC10Q8IXB1 793 aa20.92■□□□□ 0.94
GDPD3-202ENST00000406256 MIS18AQ9NYP9 233 aa20.92■□□□□ 0.94
GDPD3-202ENST00000406256 CNTNAP4Q9C0A0 1308 aa20.92■□□□□ 0.94
GDPD3-202ENST00000406256 LMOD3Q0VAK6 560 aa20.91■□□□□ 0.94
GDPD3-202ENST00000406256 SMIM5Q71RC9 77 aa20.91■□□□□ 0.94
GDPD3-202ENST00000406256 VSIG10Q8N0Z9 540 aa20.91■□□□□ 0.94
GDPD3-202ENST00000406256 MIER1Q8N108 512 aa20.91■□□□□ 0.94
GDPD3-202ENST00000406256 FAM9BQ8IZU0 186 aa20.9■□□□□ 0.94
GDPD3-202ENST00000406256 SENP3-EIF4A1A0A087X0R7 540 aa20.89■□□□□ 0.93
GDPD3-202ENST00000406256 TTC5Q8N0Z6 440 aa20.89■□□□□ 0.93
GDPD3-202ENST00000406256 CYP19A1P11511 503 aaPredicted RBP20.88■□□□□ 0.93
GDPD3-202ENST00000406256 RC3H1Q5TC82 1133 aaKnown RBP20.88■□□□□ 0.93
GDPD3-202ENST00000406256 TFCP2L1Q9NZI6 479 aa20.88■□□□□ 0.93
GDPD3-202ENST00000406256 PRAMEF22A3QJZ6 481 aa20.87■□□□□ 0.93
GDPD3-202ENST00000406256 CRKLP46109 303 aaKnown RBP20.87■□□□□ 0.93
GDPD3-202ENST00000406256 INTS5Q6P9B9 1019 aaKnown RBP20.87■□□□□ 0.93
GDPD3-202ENST00000406256 COL23A1Q86Y22 540 aaPredicted RBP20.87■□□□□ 0.93
GDPD3-202ENST00000406256 FMNL2Q96PY5 1086 aa20.87■□□□□ 0.93
GDPD3-202ENST00000406256 AK7Q96M32 723 aa20.86■□□□□ 0.93
GDPD3-202ENST00000406256 EIF4A1P60842 406 aaKnown RBP20.85■□□□□ 0.93
GDPD3-202ENST00000406256 CHL1O00533 1208 aa20.85■□□□□ 0.93
GDPD3-202ENST00000406256 GNPATO15228 680 aa20.85■□□□□ 0.93
GDPD3-202ENST00000406256 ZNF853P0CG23 659 aa20.85■□□□□ 0.93
GDPD3-202ENST00000406256 HMGB2P26583 209 aaKnown RBP20.85■□□□□ 0.93
GDPD3-202ENST00000406256 SSFA2P28290 1259 aa20.85■□□□□ 0.93
GDPD3-202ENST00000406256 CCDC27Q2M243 656 aa20.85■□□□□ 0.93
GDPD3-202ENST00000406256 NCBP3Q53F19 620 aaKnown RBP20.85■□□□□ 0.93
GDPD3-202ENST00000406256 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.84■□□□□ 0.93
GDPD3-202ENST00000406256 RPS6KA4O75676 772 aa20.84■□□□□ 0.93
GDPD3-202ENST00000406256 SGIP1Q9BQI5 828 aa20.84■□□□□ 0.93
GDPD3-202ENST00000406256 BABAM1Q9NWV8 329 aa20.84■□□□□ 0.93
GDPD3-202ENST00000406256 ZBTB1Q9Y2K1 713 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms