RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 NSD2O96028 1365 aa11.38□□□□□ -0.59
NUP98-206ENST00000397013 NBPF6Q5VWK0 638 aa11.37□□□□□ -0.59
NUP98-206ENST00000397013 ZCRB1Q8TBF4 217 aaKnown RBP11.37□□□□□ -0.59
NUP98-206ENST00000397013 SLC16A10Q8TF71 515 aa11.37□□□□□ -0.59
NUP98-206ENST00000397013 NBPF4Q96M43 638 aa11.37□□□□□ -0.59
NUP98-206ENST00000397013 GIGYF1O75420 1035 aaPredicted RBP11.36□□□□□ -0.59
NUP98-206ENST00000397013 RRS1Q15050 365 aaKnown RBP11.36□□□□□ -0.59
NUP98-206ENST00000397013 AMIGO3Q86WK7 504 aa11.36□□□□□ -0.59
NUP98-206ENST00000397013 CCNL1Q9UK58 526 aaPredicted RBP11.36□□□□□ -0.59
NUP98-206ENST00000397013 WWC3Q9ULE0 1092 aa11.36□□□□□ -0.59
NUP98-206ENST00000397013 BTAF1O14981 1849 aa11.35□□□□□ -0.59
NUP98-206ENST00000397013 AMPHP49418 695 aa11.35□□□□□ -0.59
NUP98-206ENST00000397013 TESK2Q96S53 571 aa11.35□□□□□ -0.59
NUP98-206ENST00000397013 TERF2IPQ9NYB0 399 aa11.35□□□□□ -0.59
NUP98-206ENST00000397013 EDC4Q6P2E9 1401 aaKnown RBP11.35□□□□□ -0.59
NUP98-206ENST00000397013 ANKRD36BQ8N2N9 1353 aa11.34□□□□□ -0.59
NUP98-206ENST00000397013 ST20-MTHFSA0A0A6YYL1 179 aa11.34□□□□□ -0.59
NUP98-206ENST00000397013 COG3Q96JB2 828 aa11.34□□□□□ -0.59
NUP98-206ENST00000397013 MEGF6O75095 1541 aa11.34□□□□□ -0.59
NUP98-206ENST00000397013 GGNBP2Q9H3C7 697 aa11.33□□□□□ -0.6
NUP98-206ENST00000397013 MON2Q7Z3U7 1717 aa11.32□□□□□ -0.6
NUP98-206ENST00000397013 HAX1O00165 279 aa11.32□□□□□ -0.6
NUP98-206ENST00000397013 HSP90AB2PQ58FF8 381 aa11.32□□□□□ -0.6
NUP98-206ENST00000397013 FYB1O15117 783 aa11.31□□□□□ -0.6
NUP98-206ENST00000397013 MPRIPQ6WCQ1 1025 aa11.31□□□□□ -0.6
NUP98-206ENST00000397013 ZNF526Q8TF50 670 aaPredicted RBP11.31□□□□□ -0.6
NUP98-206ENST00000397013 MFRPQ9BY79 579 aa11.31□□□□□ -0.6
NUP98-206ENST00000397013 TIE1P35590 1138 aa11.3□□□□□ -0.6
NUP98-206ENST00000397013 MS4A3Q96HJ5 214 aa11.3□□□□□ -0.6
NUP98-206ENST00000397013 KAT6BQ8WYB5 2073 aa11.3□□□□□ -0.6
NUP98-206ENST00000397013 USP47Q96K76 1375 aa11.29□□□□□ -0.6
NUP98-206ENST00000397013 LTN1O94822 1766 aa11.29□□□□□ -0.6
NUP98-206ENST00000397013 CYP27B1O15528 508 aa11.29□□□□□ -0.6
NUP98-206ENST00000397013 GRIN3BO60391 1043 aa11.29□□□□□ -0.6
NUP98-206ENST00000397013 EFCAB3Q8N7B9 438 aa11.29□□□□□ -0.6
NUP98-206ENST00000397013 PUS7Q96PZ0 661 aaKnown RBP11.29□□□□□ -0.6
NUP98-206ENST00000397013 ATP10DQ9P241 1426 aa11.28□□□□□ -0.6
NUP98-206ENST00000397013 PHF14O94880 888 aa11.28□□□□□ -0.6
NUP98-206ENST00000397013 IFFO2Q5TF58 517 aa11.28□□□□□ -0.6
NUP98-206ENST00000397013 TMEM106CQ9BVX2 250 aa11.28□□□□□ -0.6
NUP98-206ENST00000397013 SHANK3Q9BYB0 1731 aa11.28□□□□□ -0.6
NUP98-206ENST00000397013 USP54Q70EL1 1684 aa11.27□□□□□ -0.6
NUP98-206ENST00000397013 TATP17735 454 aaPredicted RBP11.27□□□□□ -0.61
NUP98-206ENST00000397013 RAPGEF4Q8WZA2 1011 aa11.27□□□□□ -0.61
NUP98-206ENST00000397013 PIGBQ92521 554 aa11.27□□□□□ -0.61
NUP98-206ENST00000397013 FAM208AQ9UK61 1670 aaKnown RBP11.27□□□□□ -0.61
NUP98-206ENST00000397013 FBXO22Q8NEZ5 403 aa11.26□□□□□ -0.61
NUP98-206ENST00000397013 CARD14Q9BXL6 1004 aa11.26□□□□□ -0.61
NUP98-206ENST00000397013 CD2APQ9Y5K6 639 aa11.26□□□□□ -0.61
NUP98-206ENST00000397013 EMILIN1Q9Y6C2 1016 aa11.26□□□□□ -0.61
NUP98-206ENST00000397013 PALLDQ8WX93 1383 aa11.26□□□□□ -0.61
NUP98-206ENST00000397013 TUBGCP6Q96RT7 1819 aa11.25□□□□□ -0.61
NUP98-206ENST00000397013 CHD4Q14839 1912 aa11.25□□□□□ -0.61
NUP98-206ENST00000397013 GOLGA2Q08379 1002 aa11.25□□□□□ -0.61
NUP98-206ENST00000397013 LINC00116Q8NCU8 138 aa11.25□□□□□ -0.61
NUP98-206ENST00000397013 COL24A1Q17RW2 1714 aa11.24□□□□□ -0.61
NUP98-206ENST00000397013 DOT1LQ8TEK3 1739 aa11.24□□□□□ -0.61
NUP98-206ENST00000397013 RGPD2P0DJD1 1756 aa11.24□□□□□ -0.61
NUP98-206ENST00000397013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.24□□□□□ -0.61
NUP98-206ENST00000397013 GPBP1L1Q9HC44 474 aaPredicted RBP11.24□□□□□ -0.61
NUP98-206ENST00000397013 ASAP1Q9ULH1 1129 aa11.24□□□□□ -0.61
NUP98-206ENST00000397013 TONSLQ96HA7 1378 aa11.24□□□□□ -0.61
NUP98-206ENST00000397013 ITPK1Q13572 414 aa11.23□□□□□ -0.61
NUP98-206ENST00000397013 AK7Q96M32 723 aa11.23□□□□□ -0.61
NUP98-206ENST00000397013 IGSF1Q8N6C5 1336 aa11.23□□□□□ -0.61
NUP98-206ENST00000397013 PPM1GO15355 546 aaPredicted RBP11.22□□□□□ -0.61
NUP98-206ENST00000397013 LY75O60449 1722 aa11.22□□□□□ -0.61
NUP98-206ENST00000397013 INSRP06213 1382 aa11.22□□□□□ -0.61
NUP98-206ENST00000397013 CGNL1Q0VF96 1302 aa11.22□□□□□ -0.61
NUP98-206ENST00000397013 PCDH11XQ9BZA7 1347 aa11.22□□□□□ -0.61
NUP98-206ENST00000397013 PCDH11YQ9BZA8 1340 aa11.22□□□□□ -0.61
NUP98-206ENST00000397013 RTL1A6NKG5 1358 aa11.21□□□□□ -0.61
NUP98-206ENST00000397013 ADCY9O60503 1353 aa11.21□□□□□ -0.61
NUP98-206ENST00000397013 LOC102724428A0A0B4J2F2 783 aa11.21□□□□□ -0.61
NUP98-206ENST00000397013 KIF3CO14782 793 aa11.21□□□□□ -0.61
NUP98-206ENST00000397013 HSPA6P17066 643 aa11.21□□□□□ -0.61
NUP98-206ENST00000397013 SIK1P57059 783 aa11.21□□□□□ -0.61
NUP98-206ENST00000397013 MKRN3Q13064 507 aaKnown RBP11.21□□□□□ -0.61
NUP98-206ENST00000397013 FLAD1Q8NFF5 587 aa11.21□□□□□ -0.61
NUP98-206ENST00000397013 QSER1Q2KHR3 1735 aa11.21□□□□□ -0.62
NUP98-206ENST00000397013 TTLL13PA6NNM8 815 aa11.2□□□□□ -0.62
NUP98-206ENST00000397013 SMARCC1Q92922 1105 aaPredicted RBP11.2□□□□□ -0.62
NUP98-206ENST00000397013 SLC4A9Q96Q91 983 aa11.2□□□□□ -0.62
NUP98-206ENST00000397013 EYA1Q99502 592 aa11.2□□□□□ -0.62
NUP98-206ENST00000397013 ATG3Q9NT62 314 aa11.2□□□□□ -0.62
NUP98-206ENST00000397013 TRPC6Q9Y210 931 aa11.2□□□□□ -0.62
NUP98-206ENST00000397013 A0A0G2JLW4 131 aa11.19□□□□□ -0.62
NUP98-206ENST00000397013 GNPATO15228 680 aa11.19□□□□□ -0.62
NUP98-206ENST00000397013 TMF1P82094 1093 aa11.19□□□□□ -0.62
NUP98-206ENST00000397013 EVX2Q03828 476 aa11.19□□□□□ -0.62
NUP98-206ENST00000397013 FLT4P35916 1363 aa11.18□□□□□ -0.62
NUP98-206ENST00000397013 MMP10P09238 476 aa11.18□□□□□ -0.62
NUP98-206ENST00000397013 ATP6V1AP38606 617 aa11.18□□□□□ -0.62
NUP98-206ENST00000397013 SMG6Q86US8 1419 aaKnown RBP11.18□□□□□ -0.62
NUP98-206ENST00000397013 GALR2O43603 387 aaPredicted RBP11.17□□□□□ -0.62
NUP98-206ENST00000397013 PHKG2P15735 406 aa11.17□□□□□ -0.62
NUP98-206ENST00000397013 SSFA2P28290 1259 aa11.17□□□□□ -0.62
NUP98-206ENST00000397013 TNNT2P45379 298 aaPredicted RBP11.17□□□□□ -0.62
NUP98-206ENST00000397013 BMP2KQ9NSY1 1161 aaPredicted RBP11.17□□□□□ -0.62
NUP98-206ENST00000397013 TMOD3Q9NYL9 352 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms