RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 CEMIPQ8WUJ3 1361 aa23.61■■□□□ 1.37
TNFSF13-204ENST00000396542 WDR43Q15061 677 aaKnown RBP eCLIP23.6■■□□□ 1.37
TNFSF13-204ENST00000396542 CCDC184Q52MB2 194 aa23.6■■□□□ 1.37
TNFSF13-204ENST00000396542 NEFMP07197 916 aa23.59■■□□□ 1.37
TNFSF13-204ENST00000396542 CCNL1Q9UK58 526 aaPredicted RBP23.59■■□□□ 1.37
TNFSF13-204ENST00000396542 ADAMTS8Q9UP79 889 aa23.58■■□□□ 1.37
TNFSF13-204ENST00000396542 MAPK8IP3Q9UPT6 1336 aa23.58■■□□□ 1.36
TNFSF13-204ENST00000396542 QSER1Q2KHR3 1735 aa23.57■■□□□ 1.36
TNFSF13-204ENST00000396542 HTATSF1O43719 755 aaKnown RBP23.57■■□□□ 1.36
TNFSF13-204ENST00000396542 KCNQ4P56696 695 aa23.57■■□□□ 1.36
TNFSF13-204ENST00000396542 R3HDM1Q15032 1099 aaKnown RBP23.57■■□□□ 1.36
TNFSF13-204ENST00000396542 CICQ96RK0 1608 aaPredicted RBP23.57■■□□□ 1.36
TNFSF13-204ENST00000396542 UBR2Q8IWV8 1755 aa23.57■■□□□ 1.36
TNFSF13-204ENST00000396542 PSDA5PKW4 1024 aaPredicted RBP23.56■■□□□ 1.36
TNFSF13-204ENST00000396542 NFE2L2Q16236 605 aa23.56■■□□□ 1.36
TNFSF13-204ENST00000396542 TUBGCP6Q96RT7 1819 aa23.55■■□□□ 1.36
TNFSF13-204ENST00000396542 LOC102724428A0A0B4J2F2 783 aa23.55■■□□□ 1.36
TNFSF13-204ENST00000396542 SIK1P57059 783 aa23.55■■□□□ 1.36
TNFSF13-204ENST00000396542 SLC15A2Q16348 729 aa23.55■■□□□ 1.36
TNFSF13-204ENST00000396542 CASZ1Q86V15 1759 aa23.55■■□□□ 1.36
TNFSF13-204ENST00000396542 AKT1S1Q96B36 256 aa23.54■■□□□ 1.36
TNFSF13-204ENST00000396542 STK32BQ9NY57 414 aa23.54■■□□□ 1.36
TNFSF13-204ENST00000396542 C4BP0C0L5 1744 aa23.53■■□□□ 1.36
TNFSF13-204ENST00000396542 COL5A3P25940 1745 aaPredicted RBP23.53■■□□□ 1.36
TNFSF13-204ENST00000396542 RTF1Q92541 710 aaKnown RBP23.53■■□□□ 1.36
TNFSF13-204ENST00000396542 RUNDC1Q96C34 613 aa23.53■■□□□ 1.36
TNFSF13-204ENST00000396542 KCPQ6ZWJ8 1503 aa23.53■■□□□ 1.36
TNFSF13-204ENST00000396542 HMGB2P26583 209 aaKnown RBP23.52■■□□□ 1.36
TNFSF13-204ENST00000396542 TEFQ10587 303 aa23.52■■□□□ 1.36
TNFSF13-204ENST00000396542 ZNF827Q17R98 1081 aa23.52■■□□□ 1.36
TNFSF13-204ENST00000396542 MCM10Q7L590 875 aa23.52■■□□□ 1.36
TNFSF13-204ENST00000396542 TJP1Q07157 1748 aa23.52■■□□□ 1.36
TNFSF13-204ENST00000396542 CCDC146Q8IYE0 955 aa23.51■■□□□ 1.35
TNFSF13-204ENST00000396542 PNISRQ8TF01 805 aaKnown RBP23.51■■□□□ 1.35
TNFSF13-204ENST00000396542 SLC4A9Q96Q91 983 aa23.51■■□□□ 1.35
TNFSF13-204ENST00000396542 MRS2Q9HD23 443 aa23.51■■□□□ 1.35
TNFSF13-204ENST00000396542 ATP6V1AP38606 617 aa23.49■■□□□ 1.35
TNFSF13-204ENST00000396542 TMPOP42166 694 aaKnown RBP23.49■■□□□ 1.35
TNFSF13-204ENST00000396542 ITPK1Q13572 414 aa23.49■■□□□ 1.35
TNFSF13-204ENST00000396542 DCTN1Q14203 1278 aa23.49■■□□□ 1.35
TNFSF13-204ENST00000396542 SLC39A6Q13433 755 aa23.48■■□□□ 1.35
TNFSF13-204ENST00000396542 UBR3Q6ZT12 1888 aa23.47■■□□□ 1.35
TNFSF13-204ENST00000396542 PTCD1O75127 700 aaKnown RBP23.47■■□□□ 1.35
TNFSF13-204ENST00000396542 LINC00116Q8NCU8 138 aa23.47■■□□□ 1.35
TNFSF13-204ENST00000396542 RBM42Q9BTD8 480 aaKnown RBP23.47■■□□□ 1.35
TNFSF13-204ENST00000396542 RIPK4P57078 832 aa23.46■■□□□ 1.35
TNFSF13-204ENST00000396542 KDM3BQ7LBC6 1761 aa23.45■■□□□ 1.34
TNFSF13-204ENST00000396542 LRP5O75197 1615 aa23.45■■□□□ 1.34
TNFSF13-204ENST00000396542 ZNF790Q6PG37 636 aa23.45■■□□□ 1.34
TNFSF13-204ENST00000396542 PNPLA7Q6ZV29 1317 aa23.43■■□□□ 1.34
TNFSF13-204ENST00000396542 BTBD11A6QL63 1104 aa23.43■■□□□ 1.34
TNFSF13-204ENST00000396542 PDGFDQ9GZP0 370 aaPredicted RBP23.43■■□□□ 1.34
TNFSF13-204ENST00000396542 TFCP2L1Q9NZI6 479 aa23.43■■□□□ 1.34
TNFSF13-204ENST00000396542 RRP7AQ9Y3A4 280 aaKnown RBP23.43■■□□□ 1.34
TNFSF13-204ENST00000396542 MYH14Q7Z406 1995 aaKnown RBP23.42■■□□□ 1.34
TNFSF13-204ENST00000396542 LMOD3Q0VAK6 560 aa23.42■■□□□ 1.34
TNFSF13-204ENST00000396542 TAF7Q15545 349 aaPredicted RBP23.42■■□□□ 1.34
TNFSF13-204ENST00000396542 TTC5Q8N0Z6 440 aa23.42■■□□□ 1.34
TNFSF13-204ENST00000396542 VSIG10Q8N0Z9 540 aa23.42■■□□□ 1.34
TNFSF13-204ENST00000396542 THUMPD2Q9BTF0 503 aaKnown RBP23.42■■□□□ 1.34
TNFSF13-204ENST00000396542 TRIM35Q9UPQ4 493 aa23.41■■□□□ 1.34
TNFSF13-204ENST00000396542 CNTNAP4Q9C0A0 1308 aa23.4■■□□□ 1.34
TNFSF13-204ENST00000396542 ZNF496Q96IT1 587 aaPredicted RBP23.4■■□□□ 1.34
TNFSF13-204ENST00000396542 AK7Q96M32 723 aa23.4■■□□□ 1.34
TNFSF13-204ENST00000396542 COL24A1Q17RW2 1714 aa23.39■■□□□ 1.34
TNFSF13-204ENST00000396542 APAF1O14727 1248 aa23.39■■□□□ 1.33
TNFSF13-204ENST00000396542 NEUROD2Q15784 382 aa23.39■■□□□ 1.33
TNFSF13-204ENST00000396542 RC3H1Q5TC82 1133 aaKnown RBP23.39■■□□□ 1.33
TNFSF13-204ENST00000396542 HEG1Q9ULI3 1381 aa23.39■■□□□ 1.33
TNFSF13-204ENST00000396542 KCNQ3O43525 872 aa23.38■■□□□ 1.33
TNFSF13-204ENST00000396542 AMIGO3Q86WK7 504 aa23.38■■□□□ 1.33
TNFSF13-204ENST00000396542 DIEXFQ68CQ4 756 aaKnown RBP23.37■■□□□ 1.33
TNFSF13-204ENST00000396542 DNAJC10Q8IXB1 793 aa23.37■■□□□ 1.33
TNFSF13-204ENST00000396542 FMNL2Q96PY5 1086 aa23.37■■□□□ 1.33
TNFSF13-204ENST00000396542 COL23A1Q86Y22 540 aaPredicted RBP23.36■■□□□ 1.33
TNFSF13-204ENST00000396542 FLAD1Q8NFF5 587 aa23.36■■□□□ 1.33
TNFSF13-204ENST00000396542 GNPATO15228 680 aa23.35■■□□□ 1.33
TNFSF13-204ENST00000396542 SSFA2P28290 1259 aa23.35■■□□□ 1.33
TNFSF13-204ENST00000396542 SRCAPQ6ZRS2 3230 aa23.35■■□□□ 1.33
TNFSF13-204ENST00000396542 CCER2I3L3R5 266 aa23.34■■□□□ 1.33
TNFSF13-204ENST00000396542 CYP19A1P11511 503 aaPredicted RBP23.34■■□□□ 1.33
TNFSF13-204ENST00000396542 CRKLP46109 303 aaKnown RBP23.34■■□□□ 1.33
TNFSF13-204ENST00000396542 SLC16A10Q8TF71 515 aa23.34■■□□□ 1.33
TNFSF13-204ENST00000396542 BABAM1Q9NWV8 329 aa23.34■■□□□ 1.33
TNFSF13-204ENST00000396542 MIS18AQ9NYP9 233 aa23.34■■□□□ 1.33
TNFSF13-204ENST00000396542 C4AP0C0L4 1744 aa23.33■■□□□ 1.33
TNFSF13-204ENST00000396542 LAMB4A4D0S4 1761 aa23.33■■□□□ 1.33
TNFSF13-204ENST00000396542 INTS5Q6P9B9 1019 aaKnown RBP23.33■■□□□ 1.33
TNFSF13-204ENST00000396542 MTFR1LQ9H019 292 aa23.33■■□□□ 1.33
TNFSF13-204ENST00000396542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.32■■□□□ 1.32
TNFSF13-204ENST00000396542 RPS6KA4O75676 772 aa23.32■■□□□ 1.32
TNFSF13-204ENST00000396542 ZBTB7AO95365 584 aa23.32■■□□□ 1.32
TNFSF13-204ENST00000396542 TEX13AQ9BXU3 409 aaPredicted RBP23.32■■□□□ 1.32
TNFSF13-204ENST00000396542 SPON1Q9HCB6 807 aa23.32■■□□□ 1.32
TNFSF13-204ENST00000396542 NCBP3Q53F19 620 aaKnown RBP23.31■■□□□ 1.32
TNFSF13-204ENST00000396542 SMIM5Q71RC9 77 aa23.31■■□□□ 1.32
TNFSF13-204ENST00000396542 FAM9BQ8IZU0 186 aa23.31■■□□□ 1.32
TNFSF13-204ENST00000396542 CCDC87Q9NVE4 849 aa23.31■■□□□ 1.32
TNFSF13-204ENST00000396542 RTCBQ9Y3I0 505 aaKnown RBP23.31■■□□□ 1.32
TNFSF13-204ENST00000396542 PHF14O94880 888 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms