RNA–Protein interactions for RNA: ENST00000395047.6

VDAC1-203, Transcript of voltage dependent anion channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDAC1, Length 1,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-203ENST00000395047 SF3B2Q13435 895 aaKnown RBP28.19■■■□□ 2.1
VDAC1-203ENST00000395047 MIS18AQ9NYP9 233 aa28.19■■■□□ 2.1
VDAC1-203ENST00000395047 UPF1Q92900 1129 aaKnown RBP eCLIP28.19■■■□□ 2.17e-9■■□□□ 13.9
VDAC1-203ENST00000395047 LAS1LQ9Y4W2 734 aaKnown RBP28.19■■■□□ 2.1
VDAC1-203ENST00000395047 HNRNPUQ00839 825 aaKnown RBP eCLIP28.18■■■□□ 2.1
VDAC1-203ENST00000395047 SLC39A6Q13433 755 aa28.18■■■□□ 2.1
VDAC1-203ENST00000395047 ASAP1Q9ULH1 1129 aa28.18■■■□□ 2.1
VDAC1-203ENST00000395047 MRC1P22897 1456 aa28.18■■■□□ 2.1
VDAC1-203ENST00000395047 WWC1Q8IX03 1113 aa28.17■■■□□ 2.1
VDAC1-203ENST00000395047 BTBD11A6QL63 1104 aa28.15■■■□□ 2.1
VDAC1-203ENST00000395047 DEFB132Q7Z7B7 95 aa28.15■■■□□ 2.1
VDAC1-203ENST00000395047 ATG3Q9NT62 314 aa28.14■■■□□ 2.1
VDAC1-203ENST00000395047 TAF7Q15545 349 aaPredicted RBP28.13■■■□□ 2.09
VDAC1-203ENST00000395047 EN1Q05925 392 aaPredicted RBP28.12■■■□□ 2.09
VDAC1-203ENST00000395047 CCDC27Q2M243 656 aa28.12■■■□□ 2.09
VDAC1-203ENST00000395047 KCNQ3O43525 872 aa28.11■■■□□ 2.09
VDAC1-203ENST00000395047 YTHDC1Q96MU7 727 aaKnown RBP28.11■■■□□ 2.09
VDAC1-203ENST00000395047 PTCD1O75127 700 aaKnown RBP28.1■■■□□ 2.09
VDAC1-203ENST00000395047 KCNQ4P56696 695 aa28.1■■■□□ 2.09
VDAC1-203ENST00000395047 PALLDQ8WX93 1383 aa28.1■■■□□ 2.09
VDAC1-203ENST00000395047 RBM42Q9BTD8 480 aaKnown RBP28.1■■■□□ 2.09
VDAC1-203ENST00000395047 CCDC125Q86Z20 511 aa28.09■■■□□ 2.09
VDAC1-203ENST00000395047 TTC5Q8N0Z6 440 aa28.09■■■□□ 2.09
VDAC1-203ENST00000395047 PAPPAQ13219 1627 aa28.09■■■□□ 2.09
VDAC1-203ENST00000395047 BAG6P46379 1132 aa28.08■■■□□ 2.09
VDAC1-203ENST00000395047 TSPYL4Q9UJ04 414 aa28.08■■■□□ 2.09
VDAC1-203ENST00000395047 ZNF790Q6PG37 636 aa28.08■■■□□ 2.09
VDAC1-203ENST00000395047 EZH2Q15910 746 aaKnown RBP28.07■■■□□ 2.08
VDAC1-203ENST00000395047 KDM3BQ7LBC6 1761 aa28.06■■■□□ 2.08
VDAC1-203ENST00000395047 LY75O60449 1722 aa28.06■■■□□ 2.08
VDAC1-203ENST00000395047 CALD1Q05682 793 aaKnown RBP28.06■■■□□ 2.08
VDAC1-203ENST00000395047 NGEFQ8N5V2 710 aa28.06■■■□□ 2.08
VDAC1-203ENST00000395047 SMARCC1Q92922 1105 aaPredicted RBP28.06■■■□□ 2.08
VDAC1-203ENST00000395047 NCBP3Q53F19 620 aaKnown RBP28.04■■■□□ 2.08
VDAC1-203ENST00000395047 UBR2Q8IWV8 1755 aa28.04■■■□□ 2.08
VDAC1-203ENST00000395047 PLSCR1O15162 318 aa28.04■■■□□ 2.08
VDAC1-203ENST00000395047 CFAP44Q96MT7 982 aa28.04■■■□□ 2.08
VDAC1-203ENST00000395047 TSR2Q969E8 191 aaKnown RBP28.03■■■□□ 2.08
VDAC1-203ENST00000395047 SPINK5Q9NQ38 1064 aaPredicted RBP28.03■■■□□ 2.08
VDAC1-203ENST00000395047 ZNF521Q96K83 1311 aa28.03■■■□□ 2.08
VDAC1-203ENST00000395047 WDR63Q8IWG1 891 aa28.02■■■□□ 2.08
VDAC1-203ENST00000395047 ZNF496Q96IT1 587 aaPredicted RBP28.02■■■□□ 2.08
VDAC1-203ENST00000395047 MBIPQ9NS73 344 aa28.02■■■□□ 2.08
VDAC1-203ENST00000395047 LOC102724428A0A0B4J2F2 783 aa28.02■■■□□ 2.08
VDAC1-203ENST00000395047 CHL1O00533 1208 aa28.02■■■□□ 2.08
VDAC1-203ENST00000395047 SIK1P57059 783 aa28.02■■■□□ 2.08
VDAC1-203ENST00000395047 GNAI1P63096 354 aa28.02■■■□□ 2.08
VDAC1-203ENST00000395047 TXNRD1Q16881 649 aa28.02■■■□□ 2.08
VDAC1-203ENST00000395047 PROM2Q8N271 834 aa28.02■■■□□ 2.08
VDAC1-203ENST00000395047 CAMKK2Q96RR4 588 aa28.02■■■□□ 2.08
VDAC1-203ENST00000395047 IFT57Q9NWB7 429 aa28.02■■■□□ 2.08
VDAC1-203ENST00000395047 CCNL1Q9UK58 526 aaPredicted RBP28.02■■■□□ 2.08
VDAC1-203ENST00000395047 KCPQ6ZWJ8 1503 aa28.01■■■□□ 2.07
VDAC1-203ENST00000395047 ATP6V1AP38606 617 aa28■■■□□ 2.07
VDAC1-203ENST00000395047 SLC4A9Q96Q91 983 aa28■■■□□ 2.07
VDAC1-203ENST00000395047 CDCA7LQ96GN5 454 aa28■■■□□ 2.07
VDAC1-203ENST00000395047 RGPD3A6NKT7 1758 aaPredicted RBP27.99■■■□□ 2.07
VDAC1-203ENST00000395047 RGPD4Q7Z3J3 1758 aa27.99■■■□□ 2.07
VDAC1-203ENST00000395047 ZNF853P0CG23 659 aa27.99■■■□□ 2.07
VDAC1-203ENST00000395047 LRRC4BQ9NT99 713 aa27.99■■■□□ 2.07
VDAC1-203ENST00000395047 GOLGA2Q08379 1002 aa27.98■■■□□ 2.07
VDAC1-203ENST00000395047 KRT24Q2M2I5 525 aa27.98■■■□□ 2.07
VDAC1-203ENST00000395047 FMNL2Q96PY5 1086 aa27.98■■■□□ 2.07
VDAC1-203ENST00000395047 PRAMEF22A3QJZ6 481 aa27.96■■■□□ 2.07
VDAC1-203ENST00000395047 SOCS7O14512 581 aa27.96■■■□□ 2.07
VDAC1-203ENST00000395047 EIF4A1P60842 406 aaKnown RBP27.96■■■□□ 2.07
VDAC1-203ENST00000395047 IL16Q14005 1332 aa27.96■■■□□ 2.07
VDAC1-203ENST00000395047 TAF1LQ8IZX4 1826 aa27.96■■■□□ 2.07
VDAC1-203ENST00000395047 ITPK1Q13572 414 aa27.95■■■□□ 2.06
VDAC1-203ENST00000395047 BABAM1Q9NWV8 329 aa27.95■■■□□ 2.06
VDAC1-203ENST00000395047 C5P01031 1676 aa27.94■■■□□ 2.06
VDAC1-203ENST00000395047 HEG1Q9ULI3 1381 aa27.94■■■□□ 2.06
VDAC1-203ENST00000395047 RREB1Q92766 1687 aa27.94■■■□□ 2.06
VDAC1-203ENST00000395047 TJP1Q07157 1748 aa27.94■■■□□ 2.06
VDAC1-203ENST00000395047 DNAJC10Q8IXB1 793 aa27.93■■■□□ 2.06
VDAC1-203ENST00000395047 ZBED9Q6R2W3 1325 aa27.93■■■□□ 2.06
VDAC1-203ENST00000395047 FANCIQ9NVI1 1328 aa27.93■■■□□ 2.06
VDAC1-203ENST00000395047 ELL2O00472 640 aaPredicted RBP27.93■■■□□ 2.06
VDAC1-203ENST00000395047 SLC27A3Q5K4L6 730 aa27.93■■■□□ 2.06
VDAC1-203ENST00000395047 NUP188Q5SRE5 1749 aa27.92■■■□□ 2.06
VDAC1-203ENST00000395047 LINC00116Q8NCU8 138 aa27.91■■■□□ 2.06
VDAC1-203ENST00000395047 MYH16Q9H6N6 1097 aa27.91■■■□□ 2.06
VDAC1-203ENST00000395047 SLFN5Q08AF3 891 aa27.89■■■□□ 2.06
VDAC1-203ENST00000395047 E9PSI1 815 aa27.89■■■□□ 2.05
VDAC1-203ENST00000395047 SNRPA1P09661 255 aaKnown RBP27.89■■■□□ 2.05
VDAC1-203ENST00000395047 USP16Q9Y5T5 823 aa27.89■■■□□ 2.05
VDAC1-203ENST00000395047 COL5A3P25940 1745 aaPredicted RBP27.88■■■□□ 2.05
VDAC1-203ENST00000395047 GIGYF1O75420 1035 aaPredicted RBP27.88■■■□□ 2.05
VDAC1-203ENST00000395047 VSIG10Q8N0Z9 540 aa27.88■■■□□ 2.05
VDAC1-203ENST00000395047 C8orf58Q8NAV2 365 aa27.88■■■□□ 2.05
VDAC1-203ENST00000395047 ZNF831Q5JPB2 1677 aa27.87■■■□□ 2.05
VDAC1-203ENST00000395047 NECTIN2Q92692 538 aa27.87■■■□□ 2.05
VDAC1-203ENST00000395047 MYH14Q7Z406 1995 aaKnown RBP27.87■■■□□ 2.05
VDAC1-203ENST00000395047 C4BP0C0L5 1744 aa27.86■■■□□ 2.05
VDAC1-203ENST00000395047 EIF2S2P20042 333 aaKnown RBP27.86■■■□□ 2.05
VDAC1-203ENST00000395047 EXOSC9Q06265 439 aaKnown RBP27.86■■■□□ 2.05
VDAC1-203ENST00000395047 TSPYL6Q8N831 410 aa27.86■■■□□ 2.05
VDAC1-203ENST00000395047 DUSP27Q5VZP5 1158 aa27.85■■■□□ 2.05
VDAC1-203ENST00000395047 PIP4K2AP48426 406 aaPredicted RBP27.85■■■□□ 2.05
VDAC1-203ENST00000395047 LAMB4A4D0S4 1761 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms