RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 SYCE3A1L190 88 aa12.82□□□□□ -0.36
ACTN1-203ENST00000394419 PODXL2Q9NZ53 605 aa12.82□□□□□ -0.36
ACTN1-203ENST00000394419 AATKQ6ZMQ8 1374 aa12.82□□□□□ -0.36
ACTN1-203ENST00000394419 TMEM131LA2VDJ0 1609 aa12.82□□□□□ -0.36
ACTN1-203ENST00000394419 USP32Q8NFA0 1604 aa12.82□□□□□ -0.36
ACTN1-203ENST00000394419 TAF7Q15545 349 aaPredicted RBP12.82□□□□□ -0.36
ACTN1-203ENST00000394419 ESCO1Q5FWF5 840 aa12.82□□□□□ -0.36
ACTN1-203ENST00000394419 TMX3Q96JJ7 454 aa12.82□□□□□ -0.36
ACTN1-203ENST00000394419 CWC27Q6UX04 472 aaKnown RBP12.81□□□□□ -0.36
ACTN1-203ENST00000394419 SRCIN1Q9C0H9 1055 aa12.81□□□□□ -0.36
ACTN1-203ENST00000394419 KLHL40Q2TBA0 621 aa12.81□□□□□ -0.36
ACTN1-203ENST00000394419 MPRIPQ6WCQ1 1025 aa12.81□□□□□ -0.36
ACTN1-203ENST00000394419 CWC22Q9HCG8 908 aaKnown RBP12.81□□□□□ -0.36
ACTN1-203ENST00000394419 CPSF1Q10570 1443 aaKnown RBP12.81□□□□□ -0.36
ACTN1-203ENST00000394419 PPP1R42Q7Z4L9 355 aa12.81□□□□□ -0.36
ACTN1-203ENST00000394419 CDK12Q9NYV4 1490 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-203ENST00000394419 CHMP3Q9Y3E7 222 aa12.8□□□□□ -0.36
ACTN1-203ENST00000394419 DNTTIP2Q5QJE6 756 aaKnown RBP12.8□□□□□ -0.36
ACTN1-203ENST00000394419 ESYT1Q9BSJ8 1104 aa12.8□□□□□ -0.36
ACTN1-203ENST00000394419 PALD1Q9ULE6 856 aa12.8□□□□□ -0.36
ACTN1-203ENST00000394419 PREX1Q8TCU6 1659 aa12.8□□□□□ -0.36
ACTN1-203ENST00000394419 PI4KAP2A4QPH2 592 aa12.79□□□□□ -0.36
ACTN1-203ENST00000394419 ZSCAN23Q3MJ62 389 aa12.79□□□□□ -0.36
ACTN1-203ENST00000394419 PI4KAP1Q8N8J0 262 aa12.79□□□□□ -0.36
ACTN1-203ENST00000394419 DIAPH3Q9NSV4 1193 aa12.79□□□□□ -0.36
ACTN1-203ENST00000394419 SPG7Q9UQ90 795 aa12.79□□□□□ -0.36
ACTN1-203ENST00000394419 PLEKHG3A1L390 1219 aa12.79□□□□□ -0.36
ACTN1-203ENST00000394419 ZNF530Q6P9A1 599 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-203ENST00000394419 TMEM2Q9UHN6 1383 aa12.79□□□□□ -0.36
ACTN1-203ENST00000394419 KCNA6P17658 529 aa12.78□□□□□ -0.36
ACTN1-203ENST00000394419 UNC5CLQ8IV45 518 aa12.78□□□□□ -0.36
ACTN1-203ENST00000394419 IL17REQ8NFR9 667 aa12.78□□□□□ -0.36
ACTN1-203ENST00000394419 FLT4P35916 1363 aa12.78□□□□□ -0.36
ACTN1-203ENST00000394419 PRIM1P49642 420 aaKnown RBP12.78□□□□□ -0.36
ACTN1-203ENST00000394419 ATP8B2P98198 1209 aa12.78□□□□□ -0.36
ACTN1-203ENST00000394419 C1orf141Q5JVX7 400 aa12.78□□□□□ -0.36
ACTN1-203ENST00000394419 VSIG10Q8N0Z9 540 aa12.78□□□□□ -0.36
ACTN1-203ENST00000394419 LRRC59Q96AG4 307 aaKnown RBP12.78□□□□□ -0.36
ACTN1-203ENST00000394419 TAOK2Q9UL54 1235 aa12.78□□□□□ -0.36
ACTN1-203ENST00000394419 ISY1Q9ULR0 285 aaKnown RBP12.78□□□□□ -0.36
ACTN1-203ENST00000394419 AK9Q5TCS8 1911 aa12.78□□□□□ -0.36
ACTN1-203ENST00000394419 THEMISQ8N1K5 641 aaPredicted RBP12.78□□□□□ -0.36
ACTN1-203ENST00000394419 SIL1Q9H173 461 aa12.78□□□□□ -0.36
ACTN1-203ENST00000394419 CHPF2Q9P2E5 772 aa12.78□□□□□ -0.36
ACTN1-203ENST00000394419 HOXC9P31274 260 aa12.77□□□□□ -0.36
ACTN1-203ENST00000394419 CCDC173Q0VFZ6 552 aa12.77□□□□□ -0.36
ACTN1-203ENST00000394419 LGR6Q9HBX8 967 aa12.77□□□□□ -0.36
ACTN1-203ENST00000394419 BTBD11A6QL63 1104 aa12.77□□□□□ -0.37
ACTN1-203ENST00000394419 IFIT2P09913 472 aaKnown RBP12.77□□□□□ -0.37
ACTN1-203ENST00000394419 CLCN1P35523 988 aa12.77□□□□□ -0.37
ACTN1-203ENST00000394419 CHMLP26374 656 aa12.76□□□□□ -0.37
ACTN1-203ENST00000394419 CPA1P15085 419 aa12.76□□□□□ -0.37
ACTN1-203ENST00000394419 DDIT3P35638 169 aa12.76□□□□□ -0.37
ACTN1-203ENST00000394419 VIRMAQ69YN4 1812 aaKnown RBP12.76□□□□□ -0.37
ACTN1-203ENST00000394419 SETD1BQ9UPS6 1966 aaKnown RBP12.76□□□□□ -0.37
ACTN1-203ENST00000394419 KCNQ3O43525 872 aa12.76□□□□□ -0.37
ACTN1-203ENST00000394419 NBPF7P0C2Y1 421 aaPredicted RBP12.76□□□□□ -0.37
ACTN1-203ENST00000394419 LMBRD1Q9NUN5 540 aa12.76□□□□□ -0.37
ACTN1-203ENST00000394419 KIAA0232Q92628 1395 aa12.75□□□□□ -0.37
ACTN1-203ENST00000394419 VPS37CA5D8V6 355 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-203ENST00000394419 FIBPO43427 364 aa12.75□□□□□ -0.37
ACTN1-203ENST00000394419 CLASRPQ8N2M8 674 aaKnown RBP12.75□□□□□ -0.37
ACTN1-203ENST00000394419 USP44Q9H0E7 712 aa12.75□□□□□ -0.37
ACTN1-203ENST00000394419 HSP90AA2PQ14568 343 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-203ENST00000394419 CNTROBQ8N137 903 aa12.75□□□□□ -0.37
ACTN1-203ENST00000394419 ERBB4Q15303 1308 aa12.75□□□□□ -0.37
ACTN1-203ENST00000394419 CLTCQ00610 1675 aaKnown RBP12.75□□□□□ -0.37
ACTN1-203ENST00000394419 RHPN1Q8TCX5 695 aa12.75□□□□□ -0.37
ACTN1-203ENST00000394419 RBSNQ9H1K0 784 aa12.75□□□□□ -0.37
ACTN1-203ENST00000394419 NAP1L2Q9ULW6 460 aaPredicted RBP12.75□□□□□ -0.37
ACTN1-203ENST00000394419 USP6P35125 1406 aa12.74□□□□□ -0.37
ACTN1-203ENST00000394419 PA2G4Q9UQ80 394 aaKnown RBP12.74□□□□□ -0.37
ACTN1-203ENST00000394419 SMC3Q9UQE7 1217 aa12.74□□□□□ -0.37
ACTN1-203ENST00000394419 TTC21AQ8NDW8 1320 aa12.74□□□□□ -0.37
ACTN1-203ENST00000394419 CSB-PGBD3P0DP91 1061 aa12.74□□□□□ -0.37
ACTN1-203ENST00000394419 DNAAF4Q8WXU2 420 aa12.74□□□□□ -0.37
ACTN1-203ENST00000394419 SYAP1Q96A49 352 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-203ENST00000394419 PHF8Q9UPP1 1060 aa12.74□□□□□ -0.37
ACTN1-203ENST00000394419 R3HCC1Q9Y3T6 440 aaKnown RBP12.74□□□□□ -0.37
ACTN1-203ENST00000394419 MYL6BP14649 208 aa12.74□□□□□ -0.37
ACTN1-203ENST00000394419 MCM2P49736 904 aa12.74□□□□□ -0.37
ACTN1-203ENST00000394419 JARID2Q92833 1246 aaPredicted RBP12.74□□□□□ -0.37
ACTN1-203ENST00000394419 FGD1P98174 961 aa12.73□□□□□ -0.37
ACTN1-203ENST00000394419 NSFL1CQ9UNZ2 370 aaKnown RBP12.73□□□□□ -0.37
ACTN1-203ENST00000394419 SBNO1A3KN83 1393 aa12.73□□□□□ -0.37
ACTN1-203ENST00000394419 ATP10DQ9P241 1426 aa12.73□□□□□ -0.37
ACTN1-203ENST00000394419 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.73□□□□□ -0.37
ACTN1-203ENST00000394419 CASTP20810 708 aaKnown RBP12.73□□□□□ -0.37
ACTN1-203ENST00000394419 SIRT1Q96EB6 747 aa12.73□□□□□ -0.37
ACTN1-203ENST00000394419 KIF1BPQ96EK5 621 aa12.73□□□□□ -0.37
ACTN1-203ENST00000394419 ZC3H6P61129 1189 aaKnown RBP12.72□□□□□ -0.37
ACTN1-203ENST00000394419 GPT2Q8TD30 523 aa12.72□□□□□ -0.37
ACTN1-203ENST00000394419 GPATCH3Q96I76 525 aa12.72□□□□□ -0.37
ACTN1-203ENST00000394419 KIF24Q5T7B8 1368 aa12.72□□□□□ -0.37
ACTN1-203ENST00000394419 CCDC8Q9H0W5 538 aaPredicted RBP12.72□□□□□ -0.37
ACTN1-203ENST00000394419 TMEM63CQ9P1W3 806 aa12.72□□□□□ -0.37
ACTN1-203ENST00000394419 CWF19L2Q2TBE0 894 aaKnown RBP12.72□□□□□ -0.37
ACTN1-203ENST00000394419 NBPF6Q5VWK0 638 aa12.72□□□□□ -0.37
ACTN1-203ENST00000394419 PRPF40BQ6NWY9 871 aaKnown RBP12.72□□□□□ -0.37
ACTN1-203ENST00000394419 AACSQ86V21 672 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms