RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 KIAA2012Q0VF49 1180 aa20.24■□□□□ 0.83
SIPA1-201ENST00000394224 ADCY5O95622 1261 aa20.24■□□□□ 0.83
SIPA1-201ENST00000394224 SIL1Q9H173 461 aa20.24■□□□□ 0.83
SIPA1-201ENST00000394224 YEATS2Q9ULM3 1422 aa20.24■□□□□ 0.83
SIPA1-201ENST00000394224 UBTFL1P0CB47 393 aaPredicted RBP20.23■□□□□ 0.83
SIPA1-201ENST00000394224 CHMLP26374 656 aa20.23■□□□□ 0.83
SIPA1-201ENST00000394224 CASTP20810 708 aaKnown RBP20.23■□□□□ 0.83
SIPA1-201ENST00000394224 CKAP2LQ8IYA6 745 aa20.23■□□□□ 0.83
SIPA1-201ENST00000394224 SRCIN1Q9C0H9 1055 aa20.23■□□□□ 0.83
SIPA1-201ENST00000394224 AIMP1Q12904 312 aaKnown RBP20.23■□□□□ 0.83
SIPA1-201ENST00000394224 TFIP11Q9UBB9 837 aaKnown RBP20.23■□□□□ 0.83
SIPA1-201ENST00000394224 CCDC39Q9UFE4 941 aa20.22■□□□□ 0.83
SIPA1-201ENST00000394224 FAM135BQ49AJ0 1406 aa20.22■□□□□ 0.83
SIPA1-201ENST00000394224 ZMYM3Q14202 1370 aa20.22■□□□□ 0.83
SIPA1-201ENST00000394224 RASEFQ8IZ41 740 aa20.22■□□□□ 0.83
SIPA1-201ENST00000394224 CHL1O00533 1208 aa20.21■□□□□ 0.83
SIPA1-201ENST00000394224 CYP2E1P05181 493 aaPredicted RBP20.21■□□□□ 0.83
SIPA1-201ENST00000394224 DNM1Q05193 864 aaKnown RBP20.21■□□□□ 0.83
SIPA1-201ENST00000394224 PA2G4Q9UQ80 394 aaKnown RBP20.21■□□□□ 0.83
SIPA1-201ENST00000394224 ACEP12821 1306 aa20.21■□□□□ 0.83
SIPA1-201ENST00000394224 SMC3Q9UQE7 1217 aa20.21■□□□□ 0.83
SIPA1-201ENST00000394224 NLRP6P59044 892 aa20.21■□□□□ 0.83
SIPA1-201ENST00000394224 MAP3K19Q56UN5 1328 aa20.21■□□□□ 0.83
SIPA1-201ENST00000394224 FAM69CQ0P6D2 419 aa20.2■□□□□ 0.82
SIPA1-201ENST00000394224 PPP1R42Q7Z4L9 355 aa20.2■□□□□ 0.82
SIPA1-201ENST00000394224 PRPF40BQ6NWY9 871 aaKnown RBP20.2■□□□□ 0.82
SIPA1-201ENST00000394224 ZNF592Q92610 1267 aa20.2■□□□□ 0.82
SIPA1-201ENST00000394224 NDUFB9Q9Y6M9 179 aa20.2■□□□□ 0.82
SIPA1-201ENST00000394224 LARGE1O95461 756 aa20.2■□□□□ 0.82
SIPA1-201ENST00000394224 CEBPAP49715 358 aaPredicted RBP20.2■□□□□ 0.82
SIPA1-201ENST00000394224 SHROOM2Q13796 1616 aa20.2■□□□□ 0.82
SIPA1-201ENST00000394224 HDGFL1Q5TGJ6 251 aa20.19■□□□□ 0.82
SIPA1-201ENST00000394224 CAMSAP1Q5T5Y3 1602 aa20.19■□□□□ 0.82
SIPA1-201ENST00000394224 NPHP1O15259 732 aa20.19■□□□□ 0.82
SIPA1-201ENST00000394224 A0A087WWV3 80 aa20.19■□□□□ 0.82
SIPA1-201ENST00000394224 NBPF7P0C2Y1 421 aaPredicted RBP20.19■□□□□ 0.82
SIPA1-201ENST00000394224 AK2P54819 239 aa20.19■□□□□ 0.82
SIPA1-201ENST00000394224 COL9A3Q14050 684 aaPredicted RBP20.19■□□□□ 0.82
SIPA1-201ENST00000394224 A0A0U1RQG5 324 aaPredicted RBP20.18■□□□□ 0.82
SIPA1-201ENST00000394224 JAKMIP1Q96N16 626 aaKnown RBP20.18■□□□□ 0.82
SIPA1-201ENST00000394224 CD163L1Q9NR16 1453 aa20.18■□□□□ 0.82
SIPA1-201ENST00000394224 ZBTB9Q96C00 473 aa20.18■□□□□ 0.82
SIPA1-201ENST00000394224 ADGRB3O60242 1522 aa20.18■□□□□ 0.82
SIPA1-201ENST00000394224 COL3A1P02461 1466 aaPredicted RBP20.18■□□□□ 0.82
SIPA1-201ENST00000394224 SYAP1Q96A49 352 aaPredicted RBP20.17■□□□□ 0.82
SIPA1-201ENST00000394224 MBD3O95983 291 aa20.17■□□□□ 0.82
SIPA1-201ENST00000394224 TAF7Q15545 349 aaPredicted RBP20.17■□□□□ 0.82
SIPA1-201ENST00000394224 BRD1O95696 1058 aa20.17■□□□□ 0.82
SIPA1-201ENST00000394224 PRR36Q9H6K5 1346 aa20.16■□□□□ 0.82
SIPA1-201ENST00000394224 METP08581 1390 aa20.16■□□□□ 0.82
SIPA1-201ENST00000394224 PNPLA6Q8IY17 1366 aa20.16■□□□□ 0.82
SIPA1-201ENST00000394224 MROH1Q8NDA8 1641 aa20.16■□□□□ 0.82
SIPA1-201ENST00000394224 PIP4K2AP48426 406 aaPredicted RBP20.16■□□□□ 0.82
SIPA1-201ENST00000394224 DIAPH3Q9NSV4 1193 aa20.16■□□□□ 0.82
SIPA1-201ENST00000394224 KDM4AO75164 1064 aa20.15■□□□□ 0.82
SIPA1-201ENST00000394224 EYA1Q99502 592 aa20.15■□□□□ 0.82
SIPA1-201ENST00000394224 SYT1P21579 422 aa20.15■□□□□ 0.82
SIPA1-201ENST00000394224 PTCH1Q13635 1447 aa20.15■□□□□ 0.82
SIPA1-201ENST00000394224 ADCK5Q3MIX3 580 aa20.15■□□□□ 0.82
SIPA1-201ENST00000394224 DDX11Q96FC9 970 aa20.15■□□□□ 0.82
SIPA1-201ENST00000394224 KCNQ3O43525 872 aa20.15■□□□□ 0.82
SIPA1-201ENST00000394224 KLHDC4Q8TBB5 520 aa20.15■□□□□ 0.82
SIPA1-201ENST00000394224 GOLGA6L4A6NEF3 574 aa20.14■□□□□ 0.82
SIPA1-201ENST00000394224 CCT4P50991 539 aaKnown RBP20.14■□□□□ 0.81
SIPA1-201ENST00000394224 CCDC8Q9H0W5 538 aaPredicted RBP20.14■□□□□ 0.81
SIPA1-201ENST00000394224 NRXN1Q9ULB1 1477 aa20.14■□□□□ 0.81
SIPA1-201ENST00000394224 ATP10DQ9P241 1426 aa20.13■□□□□ 0.81
SIPA1-201ENST00000394224 PI4KAP2A4QPH2 592 aa20.13■□□□□ 0.81
SIPA1-201ENST00000394224 GJB2P29033 226 aa20.13■□□□□ 0.81
SIPA1-201ENST00000394224 PI4KAP1Q8N8J0 262 aa20.13■□□□□ 0.81
SIPA1-201ENST00000394224 NOLC1Q14978 699 aaKnown RBP eCLIP20.13■□□□□ 0.81
SIPA1-201ENST00000394224 LRRC2Q9BYS8 371 aa20.13■□□□□ 0.81
SIPA1-201ENST00000394224 OSCARQ8IYS5 282 aa20.12■□□□□ 0.81
SIPA1-201ENST00000394224 TTC21BQ7Z4L5 1316 aa20.12■□□□□ 0.81
SIPA1-201ENST00000394224 ABCC3O15438 1527 aa20.12■□□□□ 0.81
SIPA1-201ENST00000394224 STX6O43752 255 aa20.12■□□□□ 0.81
SIPA1-201ENST00000394224 ERCC4Q92889 916 aaPredicted RBP20.12■□□□□ 0.81
SIPA1-201ENST00000394224 EDC3Q96F86 508 aaKnown RBP20.12■□□□□ 0.81
SIPA1-201ENST00000394224 USP44Q9H0E7 712 aa20.12■□□□□ 0.81
SIPA1-201ENST00000394224 BRPF1P55201 1214 aaPredicted RBP20.11■□□□□ 0.81
SIPA1-201ENST00000394224 PTH1RQ03431 593 aa20.11■□□□□ 0.81
SIPA1-201ENST00000394224 LUZP1Q86V48 1076 aa20.11■□□□□ 0.81
SIPA1-201ENST00000394224 PDLIM2Q96JY6 352 aa20.11■□□□□ 0.81
SIPA1-201ENST00000394224 SOS1Q07889 1333 aaPredicted RBP20.11■□□□□ 0.81
SIPA1-201ENST00000394224 WDR33Q9C0J8 1336 aaKnown RBP20.11■□□□□ 0.81
SIPA1-201ENST00000394224 CCDC30Q5VVM6 783 aa20.11■□□□□ 0.81
SIPA1-201ENST00000394224 SASS6Q6UVJ0 657 aa20.11■□□□□ 0.81
SIPA1-201ENST00000394224 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.11■□□□□ 0.81
SIPA1-201ENST00000394224 V9GYY5 206 aaPredicted RBP20.11■□□□□ 0.81
SIPA1-201ENST00000394224 CFAP74Q9C0B2 1584 aa20.1■□□□□ 0.81
SIPA1-201ENST00000394224 GNAI3P08754 354 aa20.1■□□□□ 0.81
SIPA1-201ENST00000394224 SYTL4Q96C24 671 aaPredicted RBP20.1■□□□□ 0.81
SIPA1-201ENST00000394224 C16orf45Q96MC5 204 aaPredicted RBP20.1■□□□□ 0.81
SIPA1-201ENST00000394224 PUS7Q96PZ0 661 aaKnown RBP20.1■□□□□ 0.81
SIPA1-201ENST00000394224 CHGBP05060 677 aa20.1■□□□□ 0.81
SIPA1-201ENST00000394224 C9orf78Q9NZ63 289 aaPredicted RBP20.1■□□□□ 0.81
SIPA1-201ENST00000394224 KIDINS220Q9ULH0 1771 aa20.1■□□□□ 0.81
SIPA1-201ENST00000394224 PPP4R3BQ5MIZ7 849 aa20.1■□□□□ 0.81
SIPA1-201ENST00000394224 SNX14Q9Y5W7 946 aa20.1■□□□□ 0.81
SIPA1-201ENST00000394224 FGD1P98174 961 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms