RNA–Protein interactions for RNA: ENST00000384619.1

RNVU1-17-201, Transcript of RNA, variant U1 small nuclear 17, humanhuman

BASIC

Gene RNVU1-17, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-17-201ENST00000384619 RGS12O14924 1447 aa12.89□□□□□ -0.35
RNVU1-17-201ENST00000384619 KDM6AO15550 1401 aaPredicted RBP12.89□□□□□ -0.35
RNVU1-17-201ENST00000384619 FAM182BQ5T319 152 aa12.89□□□□□ -0.35
RNVU1-17-201ENST00000384619 ZNF790Q6PG37 636 aa12.89□□□□□ -0.35
RNVU1-17-201ENST00000384619 ACSBG1Q96GR2 724 aa12.89□□□□□ -0.35
RNVU1-17-201ENST00000384619 RGPD2P0DJD1 1756 aa12.89□□□□□ -0.35
RNVU1-17-201ENST00000384619 TRMT2AQ8IZ69 625 aaKnown RBP12.88□□□□□ -0.35
RNVU1-17-201ENST00000384619 KCNQ2O43526 872 aa12.87□□□□□ -0.35
RNVU1-17-201ENST00000384619 CCDC125Q86Z20 511 aa12.87□□□□□ -0.35
RNVU1-17-201ENST00000384619 CDCA7LQ96GN5 454 aa12.87□□□□□ -0.35
RNVU1-17-201ENST00000384619 MBIPQ9NS73 344 aa12.87□□□□□ -0.35
RNVU1-17-201ENST00000384619 MIS18AQ9NYP9 233 aa12.87□□□□□ -0.35
RNVU1-17-201ENST00000384619 PKD1L3Q7Z443 1732 aa12.87□□□□□ -0.35
RNVU1-17-201ENST00000384619 SOS1Q07889 1333 aaPredicted RBP12.87□□□□□ -0.35
RNVU1-17-201ENST00000384619 CT47B1P0C2W7 299 aaPredicted RBP12.86□□□□□ -0.35
RNVU1-17-201ENST00000384619 FMNL2Q96PY5 1086 aa12.86□□□□□ -0.35
RNVU1-17-201ENST00000384619 TEX13AQ9BXU3 409 aaPredicted RBP12.86□□□□□ -0.35
RNVU1-17-201ENST00000384619 ATG3Q9NT62 314 aa12.86□□□□□ -0.35
RNVU1-17-201ENST00000384619 LRRC37A3O60309 1634 aa12.85□□□□□ -0.35
RNVU1-17-201ENST00000384619 TRIM37O94972 964 aa12.85□□□□□ -0.35
RNVU1-17-201ENST00000384619 EIF4A1P60842 406 aaKnown RBP12.85□□□□□ -0.35
RNVU1-17-201ENST00000384619 SF3B2Q13435 895 aaKnown RBP12.85□□□□□ -0.35
RNVU1-17-201ENST00000384619 DUSP27Q5VZP5 1158 aa12.85□□□□□ -0.35
RNVU1-17-201ENST00000384619 VSIG10Q8N0Z9 540 aa12.85□□□□□ -0.35
RNVU1-17-201ENST00000384619 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
RNVU1-17-201ENST00000384619 ASAP1Q9ULH1 1129 aa12.85□□□□□ -0.35
RNVU1-17-201ENST00000384619 FANCIQ9NVI1 1328 aa12.85□□□□□ -0.35
RNVU1-17-201ENST00000384619 HOXB7P09629 217 aa12.84□□□□□ -0.35
RNVU1-17-201ENST00000384619 SNRPA1P09661 255 aaKnown RBP12.84□□□□□ -0.35
RNVU1-17-201ENST00000384619 SLC39A6Q13433 755 aa12.84□□□□□ -0.35
RNVU1-17-201ENST00000384619 TSR2Q969E8 191 aaKnown RBP12.84□□□□□ -0.35
RNVU1-17-201ENST00000384619 ZNF428Q96B54 188 aa12.84□□□□□ -0.35
RNVU1-17-201ENST00000384619 PLSCR1O15162 318 aa12.83□□□□□ -0.36
RNVU1-17-201ENST00000384619 PTCD1O75127 700 aaKnown RBP12.83□□□□□ -0.36
RNVU1-17-201ENST00000384619 APBA3O96018 575 aa12.82□□□□□ -0.36
RNVU1-17-201ENST00000384619 EXOSC9Q06265 439 aaKnown RBP12.82□□□□□ -0.36
RNVU1-17-201ENST00000384619 ZNF496Q96IT1 587 aaPredicted RBP12.82□□□□□ -0.36
RNVU1-17-201ENST00000384619 RBM42Q9BTD8 480 aaKnown RBP12.82□□□□□ -0.36
RNVU1-17-201ENST00000384619 MRC1P22897 1456 aa12.82□□□□□ -0.36
RNVU1-17-201ENST00000384619 KCNQ3O43525 872 aa12.81□□□□□ -0.36
RNVU1-17-201ENST00000384619 GIGYF1O75420 1035 aaPredicted RBP12.81□□□□□ -0.36
RNVU1-17-201ENST00000384619 STARD3NLO95772 234 aa12.81□□□□□ -0.36
RNVU1-17-201ENST00000384619 TWISTNBQ3B726 338 aaPredicted RBP12.81□□□□□ -0.36
RNVU1-17-201ENST00000384619 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
RNVU1-17-201ENST00000384619 LOC102724428A0A0B4J2F2 783 aa12.8□□□□□ -0.36
RNVU1-17-201ENST00000384619 CENPBP07199 599 aaPredicted RBP12.8□□□□□ -0.36
RNVU1-17-201ENST00000384619 SIK1P57059 783 aa12.8□□□□□ -0.36
RNVU1-17-201ENST00000384619 SLC27A3Q5K4L6 730 aa12.8□□□□□ -0.36
RNVU1-17-201ENST00000384619 C8orf58Q8NAV2 365 aa12.8□□□□□ -0.36
RNVU1-17-201ENST00000384619 HEG1Q9ULI3 1381 aa12.8□□□□□ -0.36
RNVU1-17-201ENST00000384619 ELL2O00472 640 aaPredicted RBP12.79□□□□□ -0.36
RNVU1-17-201ENST00000384619 VAMP4O75379 141 aa12.79□□□□□ -0.36
RNVU1-17-201ENST00000384619 ATP6V1AP38606 617 aa12.79□□□□□ -0.36
RNVU1-17-201ENST00000384619 BAG6P46379 1132 aa12.79□□□□□ -0.36
RNVU1-17-201ENST00000384619 CCDC30Q5VVM6 783 aa12.79□□□□□ -0.36
RNVU1-17-201ENST00000384619 PTF1AQ7RTS3 328 aa12.79□□□□□ -0.36
RNVU1-17-201ENST00000384619 ADAMTS7Q9UKP4 1686 aa12.79□□□□□ -0.36
RNVU1-17-201ENST00000384619 WNK3Q9BYP7 1800 aa12.78□□□□□ -0.36
RNVU1-17-201ENST00000384619 ALDH1L2Q3SY69 923 aa12.77□□□□□ -0.37
RNVU1-17-201ENST00000384619 TSPYL6Q8N831 410 aa12.77□□□□□ -0.37
RNVU1-17-201ENST00000384619 STK31Q9BXU1 1019 aa12.77□□□□□ -0.37
RNVU1-17-201ENST00000384619 CCNL1Q9UK58 526 aaPredicted RBP12.77□□□□□ -0.37
RNVU1-17-201ENST00000384619 EIF2S2P20042 333 aaKnown RBP12.76□□□□□ -0.37
RNVU1-17-201ENST00000384619 TXNRD1Q16881 649 aa12.76□□□□□ -0.37
RNVU1-17-201ENST00000384619 KRT24Q2M2I5 525 aa12.76□□□□□ -0.37
RNVU1-17-201ENST00000384619 HDGFL1Q5TGJ6 251 aa12.76□□□□□ -0.37
RNVU1-17-201ENST00000384619 NPM2Q86SE8 214 aaKnown RBP12.76□□□□□ -0.37
RNVU1-17-201ENST00000384619 DBF4Q9UBU7 674 aaPredicted RBP12.76□□□□□ -0.37
RNVU1-17-201ENST00000384619 USP16Q9Y5T5 823 aa12.76□□□□□ -0.37
RNVU1-17-201ENST00000384619 ERBB4Q15303 1308 aa12.76□□□□□ -0.37
RNVU1-17-201ENST00000384619 RC3H1Q5TC82 1133 aaKnown RBP12.75□□□□□ -0.37
RNVU1-17-201ENST00000384619 SHANK3Q9BYB0 1731 aa12.75□□□□□ -0.37
RNVU1-17-201ENST00000384619 RCAN3Q9UKA8 241 aa12.75□□□□□ -0.37
RNVU1-17-201ENST00000384619 CYP19A1P11511 503 aaPredicted RBP12.74□□□□□ -0.37
RNVU1-17-201ENST00000384619 DNAJC10Q8IXB1 793 aa12.74□□□□□ -0.37
RNVU1-17-201ENST00000384619 SLC4A9Q96Q91 983 aa12.74□□□□□ -0.37
RNVU1-17-201ENST00000384619 HYPKQ9NX55 129 aa12.74□□□□□ -0.37
RNVU1-17-201ENST00000384619 RARSP54136 660 aaKnown RBP12.73□□□□□ -0.37
RNVU1-17-201ENST00000384619 BRPF1P55201 1214 aaPredicted RBP12.73□□□□□ -0.37
RNVU1-17-201ENST00000384619 UPF1Q92900 1129 aaKnown RBP eCLIP12.73□□□□□ -0.37
RNVU1-17-201ENST00000384619 CAMKK2Q96RR4 588 aa12.73□□□□□ -0.37
RNVU1-17-201ENST00000384619 DDX21Q9NR30 783 aaKnown RBP eCLIP12.73□□□□□ -0.37
RNVU1-17-201ENST00000384619 CCDC87Q9NVE4 849 aa12.73□□□□□ -0.37
RNVU1-17-201ENST00000384619 SCN11AQ9UI33 1791 aa12.73□□□□□ -0.37
RNVU1-17-201ENST00000384619 IPO8O15397 1037 aaKnown RBP12.72□□□□□ -0.37
RNVU1-17-201ENST00000384619 SLC4A2P04920 1241 aa12.72□□□□□ -0.37
RNVU1-17-201ENST00000384619 EN1Q05925 392 aaPredicted RBP12.72□□□□□ -0.37
RNVU1-17-201ENST00000384619 ITPK1Q13572 414 aa12.72□□□□□ -0.37
RNVU1-17-201ENST00000384619 PROM2Q8N271 834 aa12.72□□□□□ -0.37
RNVU1-17-201ENST00000384619 PRAMEF22A3QJZ6 481 aa12.71□□□□□ -0.37
RNVU1-17-201ENST00000384619 A1BGP04217 495 aa12.71□□□□□ -0.37
RNVU1-17-201ENST00000384619 IL6STP40189 918 aaPredicted RBP12.71□□□□□ -0.37
RNVU1-17-201ENST00000384619 CRKLP46109 303 aaKnown RBP12.71□□□□□ -0.37
RNVU1-17-201ENST00000384619 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.71□□□□□ -0.37
RNVU1-17-201ENST00000384619 SSH1Q8WYL5 1049 aa12.71□□□□□ -0.37
RNVU1-17-201ENST00000384619 NECTIN2Q92692 538 aa12.71□□□□□ -0.37
RNVU1-17-201ENST00000384619 SMC4Q9NTJ3 1288 aa12.71□□□□□ -0.37
RNVU1-17-201ENST00000384619 NHSQ6T4R5 1651 aa12.7□□□□□ -0.38
RNVU1-17-201ENST00000384619 CNTNAP4Q9C0A0 1308 aa12.7□□□□□ -0.38
RNVU1-17-201ENST00000384619 A0A087WZG4 1122 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms