RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 PPP1R42Q7Z4L9 355 aa20.28■□□□□ 0.84
SGCB-201ENST00000381431 SDSP20132 328 aa20.27■□□□□ 0.84
SGCB-201ENST00000381431 CFAP45Q9UL16 551 aa20.27■□□□□ 0.84
SGCB-201ENST00000381431 PTPRCP08575 1304 aa20.27■□□□□ 0.84
SGCB-201ENST00000381431 KRT24Q2M2I5 525 aa20.27■□□□□ 0.84
SGCB-201ENST00000381431 TTC22Q5TAA0 569 aa20.27■□□□□ 0.84
SGCB-201ENST00000381431 ASXL1Q8IXJ9 1541 aa20.26■□□□□ 0.83
SGCB-201ENST00000381431 KDM5BQ9UGL1 1544 aa20.26■□□□□ 0.83
SGCB-201ENST00000381431 UQCRHLA0A096LP55 91 aa20.26■□□□□ 0.83
SGCB-201ENST00000381431 UQCRHP07919 91 aa20.26■□□□□ 0.83
SGCB-201ENST00000381431 FAM177A1Q8N128 213 aaPredicted RBP20.26■□□□□ 0.83
SGCB-201ENST00000381431 POLKQ9UBT6 870 aa20.26■□□□□ 0.83
SGCB-201ENST00000381431 DBF4Q9UBU7 674 aaPredicted RBP20.26■□□□□ 0.83
SGCB-201ENST00000381431 MAP3K11Q16584 847 aa20.26■□□□□ 0.83
SGCB-201ENST00000381431 TRIM22Q8IYM9 498 aa20.26■□□□□ 0.83
SGCB-201ENST00000381431 MTERF4Q7Z6M4 381 aaKnown RBP20.26■□□□□ 0.83
SGCB-201ENST00000381431 ANKRD36BQ8N2N9 1353 aa20.25■□□□□ 0.83
SGCB-201ENST00000381431 LIMCH1Q9UPQ0 1083 aa20.25■□□□□ 0.83
SGCB-201ENST00000381431 GUCY1B3Q02153 619 aa20.25■□□□□ 0.83
SGCB-201ENST00000381431 TEX35Q5T0J7 233 aa20.25■□□□□ 0.83
SGCB-201ENST00000381431 PHACTR3Q96KR7 559 aa20.25■□□□□ 0.83
SGCB-201ENST00000381431 TFIP11Q9UBB9 837 aaKnown RBP20.25■□□□□ 0.83
SGCB-201ENST00000381431 RBM27Q9P2N5 1060 aaKnown RBP20.24■□□□□ 0.83
SGCB-201ENST00000381431 PPFIA3O75145 1194 aa20.24■□□□□ 0.83
SGCB-201ENST00000381431 NACAP1Q9BZK3 213 aa20.24■□□□□ 0.83
SGCB-201ENST00000381431 JARID2Q92833 1246 aaPredicted RBP20.24■□□□□ 0.83
SGCB-201ENST00000381431 USP25Q9UHP3 1055 aa20.24■□□□□ 0.83
SGCB-201ENST00000381431 CTNNA3Q9UI47 895 aa20.24■□□□□ 0.83
SGCB-201ENST00000381431 TRAPPC8Q9Y2L5 1435 aa20.24■□□□□ 0.83
SGCB-201ENST00000381431 ARHGAP45Q92619 1136 aa20.24■□□□□ 0.83
SGCB-201ENST00000381431 DMRT2Q9Y5R5 561 aa20.24■□□□□ 0.83
SGCB-201ENST00000381431 CCDC112Q8NEF3 446 aa20.23■□□□□ 0.83
SGCB-201ENST00000381431 ECHDC1Q9NTX5 307 aa20.23■□□□□ 0.83
SGCB-201ENST00000381431 UNC13AQ9UPW8 1703 aa20.23■□□□□ 0.83
SGCB-201ENST00000381431 CEP57L1Q8IYX8 460 aa20.23■□□□□ 0.83
SGCB-201ENST00000381431 PLCH2O75038 1416 aa20.22■□□□□ 0.83
SGCB-201ENST00000381431 CKAP2LQ8IYA6 745 aa20.22■□□□□ 0.83
SGCB-201ENST00000381431 POLR3AO14802 1390 aaPredicted RBP20.22■□□□□ 0.83
SGCB-201ENST00000381431 SYCP2Q9BX26 1530 aa20.22■□□□□ 0.83
SGCB-201ENST00000381431 A0A087WZG4 1122 aa20.22■□□□□ 0.83
SGCB-201ENST00000381431 CCDC69A6NI79 296 aa20.22■□□□□ 0.83
SGCB-201ENST00000381431 PANK2Q9BZ23 570 aa20.22■□□□□ 0.83
SGCB-201ENST00000381431 TDO2P48775 406 aa20.22■□□□□ 0.83
SGCB-201ENST00000381431 TCOF1Q13428 1488 aaKnown RBP20.21■□□□□ 0.83
SGCB-201ENST00000381431 RAPGEF6Q8TEU7 1601 aa20.21■□□□□ 0.83
SGCB-201ENST00000381431 OFD1O75665 1012 aa20.21■□□□□ 0.83
SGCB-201ENST00000381431 VAMP4O75379 141 aa20.21■□□□□ 0.83
SGCB-201ENST00000381431 ABCF2Q9UG63 623 aa20.21■□□□□ 0.83
SGCB-201ENST00000381431 AMOTQ4VCS5 1084 aa20.21■□□□□ 0.83
SGCB-201ENST00000381431 MRPL50Q8N5N7 158 aaKnown RBP20.21■□□□□ 0.83
SGCB-201ENST00000381431 TCEAL9Q9UHQ7 104 aa20.21■□□□□ 0.83
SGCB-201ENST00000381431 MAP3K2Q9Y2U5 619 aa20.21■□□□□ 0.83
SGCB-201ENST00000381431 ATP5J2-PTCD1G3V325 749 aa20.2■□□□□ 0.82
SGCB-201ENST00000381431 FILIP1LQ4L180 1135 aa20.2■□□□□ 0.82
SGCB-201ENST00000381431 METTL24Q5JXM2 366 aa20.2■□□□□ 0.82
SGCB-201ENST00000381431 PIBF1Q8WXW3 757 aa20.2■□□□□ 0.82
SGCB-201ENST00000381431 IFIT1P09914 478 aaKnown RBP20.2■□□□□ 0.82
SGCB-201ENST00000381431 ANKRD44Q8N8A2 993 aa20.2■□□□□ 0.82
SGCB-201ENST00000381431 PDE1AP54750 535 aa20.2■□□□□ 0.82
SGCB-201ENST00000381431 TCEANC2Q96MN5 208 aa20.2■□□□□ 0.82
SGCB-201ENST00000381431 U3KPZ7 1027 aaPredicted RBP20.2■□□□□ 0.82
SGCB-201ENST00000381431 HSP90B2PQ58FF3 399 aa20.19■□□□□ 0.82
SGCB-201ENST00000381431 CCDC82Q8N4S0 544 aa20.19■□□□□ 0.82
SGCB-201ENST00000381431 TMX3Q96JJ7 454 aa20.19■□□□□ 0.82
SGCB-201ENST00000381431 GNL3LQ9NVN8 582 aaKnown RBP20.19■□□□□ 0.82
SGCB-201ENST00000381431 TTC21BQ7Z4L5 1316 aa20.19■□□□□ 0.82
SGCB-201ENST00000381431 DENND4BO75064 1496 aaPredicted RBP20.19■□□□□ 0.82
SGCB-201ENST00000381431 IKQ13123 557 aaPredicted RBP20.19■□□□□ 0.82
SGCB-201ENST00000381431 IMMTQ16891 758 aaKnown RBP20.19■□□□□ 0.82
SGCB-201ENST00000381431 CCDC183Q5T5S1 534 aa20.19■□□□□ 0.82
SGCB-201ENST00000381431 SH2B1Q9NRF2 756 aaPredicted RBP20.19■□□□□ 0.82
SGCB-201ENST00000381431 LRP2BPQ9P2M1 347 aa20.19■□□□□ 0.82
SGCB-201ENST00000381431 RHPN1Q8TCX5 695 aa20.18■□□□□ 0.82
SGCB-201ENST00000381431 SCAND2PQ9GZW5 306 aaPredicted RBP20.18■□□□□ 0.82
SGCB-201ENST00000381431 NCKAP5LQ9HCH0 1330 aa20.18■□□□□ 0.82
SGCB-201ENST00000381431 PZPP20742 1482 aa20.18■□□□□ 0.82
SGCB-201ENST00000381431 ZBTB40Q9NUA8 1239 aa20.18■□□□□ 0.82
SGCB-201ENST00000381431 XRCC6P12956 609 aaKnown RBP eCLIP20.18■□□□□ 0.82
SGCB-201ENST00000381431 CCT2P78371 535 aaKnown RBP20.18■□□□□ 0.82
SGCB-201ENST00000381431 ZSCAN25Q6NSZ9 544 aa20.18■□□□□ 0.82
SGCB-201ENST00000381431 ZBTB3Q9H5J0 574 aa20.18■□□□□ 0.82
SGCB-201ENST00000381431 NUP160Q12769 1436 aa20.18■□□□□ 0.82
SGCB-201ENST00000381431 NUTM2BA6NNL0 878 aaPredicted RBP20.18■□□□□ 0.82
SGCB-201ENST00000381431 NUTM2EB1AL46 878 aaPredicted RBP20.18■□□□□ 0.82
SGCB-201ENST00000381431 UBE3BQ7Z3V4 1068 aa20.18■□□□□ 0.82
SGCB-201ENST00000381431 NUTM2AQ8IVF1 878 aaPredicted RBP20.18■□□□□ 0.82
SGCB-201ENST00000381431 TXLNAP40222 546 aa20.17■□□□□ 0.82
SGCB-201ENST00000381431 EIF4A2Q14240 407 aaKnown RBP20.17■□□□□ 0.82
SGCB-201ENST00000381431 UBAC1Q9BSL1 405 aa20.17■□□□□ 0.82
SGCB-201ENST00000381431 SNRKQ9NRH2 765 aa20.17■□□□□ 0.82
SGCB-201ENST00000381431 KLHL40Q2TBA0 621 aa20.17■□□□□ 0.82
SGCB-201ENST00000381431 STX6O43752 255 aa20.17■□□□□ 0.82
SGCB-201ENST00000381431 AIDAQ96BJ3 306 aa20.17■□□□□ 0.82
SGCB-201ENST00000381431 RAI14Q9P0K7 980 aa20.17■□□□□ 0.82
SGCB-201ENST00000381431 SMC5Q8IY18 1101 aa20.16■□□□□ 0.82
SGCB-201ENST00000381431 CTDP1Q9Y5B0 961 aaPredicted RBP20.16■□□□□ 0.82
SGCB-201ENST00000381431 SLC3A2P08195 630 aaKnown RBP20.16■□□□□ 0.82
SGCB-201ENST00000381431 ATP2B2Q01814 1243 aa20.16■□□□□ 0.82
SGCB-201ENST00000381431 HYPKQ9NX55 129 aa20.16■□□□□ 0.82
SGCB-201ENST00000381431 BICDL1Q6ZP65 573 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms