RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 TEFQ10587 303 aa24.64■■□□□ 1.53
SMN2-202ENST00000380742 PIGBQ92521 554 aa24.63■■□□□ 1.53
SMN2-202ENST00000380742 TMOD3Q9NYL9 352 aa24.63■■□□□ 1.53
SMN2-202ENST00000380742 PAPPAQ13219 1627 aa24.62■■□□□ 1.53
SMN2-202ENST00000380742 TRIM37O94972 964 aa24.62■■□□□ 1.53
SMN2-202ENST00000380742 ZNF521Q96K83 1311 aa24.62■■□□□ 1.53
SMN2-202ENST00000380742 KDM3BQ7LBC6 1761 aa24.61■■□□□ 1.53
SMN2-202ENST00000380742 BCL11BQ9C0K0 894 aaPredicted RBP24.6■■□□□ 1.53
SMN2-202ENST00000380742 TAF7Q15545 349 aaPredicted RBP24.59■■□□□ 1.53
SMN2-202ENST00000380742 WDR63Q8IWG1 891 aa24.57■■□□□ 1.52
SMN2-202ENST00000380742 MIS18AQ9NYP9 233 aa24.57■■□□□ 1.52
SMN2-202ENST00000380742 UBR2Q8IWV8 1755 aa24.57■■□□□ 1.52
SMN2-202ENST00000380742 BTBD11A6QL63 1104 aa24.55■■□□□ 1.52
SMN2-202ENST00000380742 CALD1Q05682 793 aaKnown RBP24.55■■□□□ 1.52
SMN2-202ENST00000380742 YTHDC1Q96MU7 727 aaKnown RBP24.55■■□□□ 1.52
SMN2-202ENST00000380742 ASAP1Q9ULH1 1129 aa24.55■■□□□ 1.52
SMN2-202ENST00000380742 LY75O60449 1722 aa24.55■■□□□ 1.52
SMN2-202ENST00000380742 ZNF853P0CG23 659 aa24.54■■□□□ 1.52
SMN2-202ENST00000380742 SLC39A6Q13433 755 aa24.54■■□□□ 1.52
SMN2-202ENST00000380742 ATG3Q9NT62 314 aa24.54■■□□□ 1.52
SMN2-202ENST00000380742 LAS1LQ9Y4W2 734 aaKnown RBP24.54■■□□□ 1.52
SMN2-202ENST00000380742 IL16Q14005 1332 aa24.54■■□□□ 1.52
SMN2-202ENST00000380742 ZBED9Q6R2W3 1325 aa24.54■■□□□ 1.52
SMN2-202ENST00000380742 CFAP44Q96MT7 982 aa24.54■■□□□ 1.52
SMN2-202ENST00000380742 SPINK5Q9NQ38 1064 aaPredicted RBP24.54■■□□□ 1.52
SMN2-202ENST00000380742 CHL1O00533 1208 aa24.53■■□□□ 1.52
SMN2-202ENST00000380742 KCNQ3O43525 872 aa24.53■■□□□ 1.52
SMN2-202ENST00000380742 IFT57Q9NWB7 429 aa24.53■■□□□ 1.52
SMN2-202ENST00000380742 GNAI1P63096 354 aa24.52■■□□□ 1.52
SMN2-202ENST00000380742 BABAM1Q9NWV8 329 aa24.52■■□□□ 1.52
SMN2-202ENST00000380742 GOLGA2Q08379 1002 aa24.51■■□□□ 1.51
SMN2-202ENST00000380742 ZNF790Q6PG37 636 aa24.51■■□□□ 1.51
SMN2-202ENST00000380742 TSPYL4Q9UJ04 414 aa24.51■■□□□ 1.51
SMN2-202ENST00000380742 KCPQ6ZWJ8 1503 aa24.51■■□□□ 1.51
SMN2-202ENST00000380742 MBIPQ9NS73 344 aa24.5■■□□□ 1.51
SMN2-202ENST00000380742 RGPD3A6NKT7 1758 aaPredicted RBP24.5■■□□□ 1.51
SMN2-202ENST00000380742 RGPD4Q7Z3J3 1758 aa24.5■■□□□ 1.51
SMN2-202ENST00000380742 APBA3O96018 575 aa24.49■■□□□ 1.51
SMN2-202ENST00000380742 CDCA7LQ96GN5 454 aa24.49■■□□□ 1.51
SMN2-202ENST00000380742 SMARCC1Q92922 1105 aaPredicted RBP24.48■■□□□ 1.51
SMN2-202ENST00000380742 TSR2Q969E8 191 aaKnown RBP24.48■■□□□ 1.51
SMN2-202ENST00000380742 PALLDQ8WX93 1383 aa24.48■■□□□ 1.51
SMN2-202ENST00000380742 TTC5Q8N0Z6 440 aa24.47■■□□□ 1.51
SMN2-202ENST00000380742 ZNF831Q5JPB2 1677 aa24.46■■□□□ 1.51
SMN2-202ENST00000380742 SLFN5Q08AF3 891 aa24.46■■□□□ 1.51
SMN2-202ENST00000380742 UPF1Q92900 1129 aaKnown RBP eCLIP24.46■■□□□ 1.51
SMN2-202ENST00000380742 PLSCR1O15162 318 aa24.45■■□□□ 1.5
SMN2-202ENST00000380742 PTCD1O75127 700 aaKnown RBP24.45■■□□□ 1.5
SMN2-202ENST00000380742 CCDC125Q86Z20 511 aa24.45■■□□□ 1.5
SMN2-202ENST00000380742 ZNF496Q96IT1 587 aaPredicted RBP24.45■■□□□ 1.5
SMN2-202ENST00000380742 C5P01031 1676 aa24.45■■□□□ 1.5
SMN2-202ENST00000380742 TAF1LQ8IZX4 1826 aa24.45■■□□□ 1.5
SMN2-202ENST00000380742 FANCIQ9NVI1 1328 aa24.45■■□□□ 1.5
SMN2-202ENST00000380742 TJP1Q07157 1748 aa24.45■■□□□ 1.5
SMN2-202ENST00000380742 E9PSI1 815 aa24.44■■□□□ 1.5
SMN2-202ENST00000380742 EIF4A1P60842 406 aaKnown RBP24.44■■□□□ 1.5
SMN2-202ENST00000380742 SF3B2Q13435 895 aaKnown RBP24.44■■□□□ 1.5
SMN2-202ENST00000380742 SLC4A9Q96Q91 983 aa24.43■■□□□ 1.5
SMN2-202ENST00000380742 RBM42Q9BTD8 480 aaKnown RBP24.43■■□□□ 1.5
SMN2-202ENST00000380742 CICQ96RK0 1608 aaPredicted RBP24.43■■□□□ 1.5
SMN2-202ENST00000380742 TRMT2AQ8IZ69 625 aaKnown RBP24.42■■□□□ 1.5
SMN2-202ENST00000380742 MYH16Q9H6N6 1097 aa24.42■■□□□ 1.5
SMN2-202ENST00000380742 HEG1Q9ULI3 1381 aa24.42■■□□□ 1.5
SMN2-202ENST00000380742 LOC102724428A0A0B4J2F2 783 aa24.42■■□□□ 1.5
SMN2-202ENST00000380742 SIK1P57059 783 aa24.42■■□□□ 1.5
SMN2-202ENST00000380742 KRT24Q2M2I5 525 aa24.42■■□□□ 1.5
SMN2-202ENST00000380742 FMNL2Q96PY5 1086 aa24.42■■□□□ 1.5
SMN2-202ENST00000380742 COL5A3P25940 1745 aaPredicted RBP24.41■■□□□ 1.5
SMN2-202ENST00000380742 EN1Q05925 392 aaPredicted RBP24.41■■□□□ 1.5
SMN2-202ENST00000380742 DEFB132Q7Z7B7 95 aa24.41■■□□□ 1.5
SMN2-202ENST00000380742 PROM2Q8N271 834 aa24.41■■□□□ 1.5
SMN2-202ENST00000380742 RREB1Q92766 1687 aa24.4■■□□□ 1.5
SMN2-202ENST00000380742 LAMB4A4D0S4 1761 aa24.4■■□□□ 1.5
SMN2-202ENST00000380742 BAG6P46379 1132 aa24.4■■□□□ 1.5
SMN2-202ENST00000380742 KCNQ4P56696 695 aa24.39■■□□□ 1.49
SMN2-202ENST00000380742 DUSP27Q5VZP5 1158 aa24.39■■□□□ 1.49
SMN2-202ENST00000380742 CAMKK2Q96RR4 588 aa24.39■■□□□ 1.49
SMN2-202ENST00000380742 PRAMEF22A3QJZ6 481 aa24.38■■□□□ 1.49
SMN2-202ENST00000380742 ATP6V1AP38606 617 aa24.38■■□□□ 1.49
SMN2-202ENST00000380742 EZH2Q15910 746 aaKnown RBP24.38■■□□□ 1.49
SMN2-202ENST00000380742 TXNRD1Q16881 649 aa24.38■■□□□ 1.49
SMN2-202ENST00000380742 VSIG10Q8N0Z9 540 aa24.38■■□□□ 1.49
SMN2-202ENST00000380742 C8orf58Q8NAV2 365 aa24.38■■□□□ 1.49
SMN2-202ENST00000380742 CCNL1Q9UK58 526 aaPredicted RBP24.38■■□□□ 1.49
SMN2-202ENST00000380742 GIGYF1O75420 1035 aaPredicted RBP24.37■■□□□ 1.49
SMN2-202ENST00000380742 EXOSC9Q06265 439 aaKnown RBP24.37■■□□□ 1.49
SMN2-202ENST00000380742 ITPK1Q13572 414 aa24.37■■□□□ 1.49
SMN2-202ENST00000380742 LRRC4BQ9NT99 713 aa24.37■■□□□ 1.49
SMN2-202ENST00000380742 NUP188Q5SRE5 1749 aa24.36■■□□□ 1.49
SMN2-202ENST00000380742 SNRPA1P09661 255 aaKnown RBP24.35■■□□□ 1.49
SMN2-202ENST00000380742 DNAJC10Q8IXB1 793 aa24.35■■□□□ 1.49
SMN2-202ENST00000380742 TSPYL6Q8N831 410 aa24.35■■□□□ 1.49
SMN2-202ENST00000380742 MYH14Q7Z406 1995 aaKnown RBP24.35■■□□□ 1.49
SMN2-202ENST00000380742 ELL2O00472 640 aaPredicted RBP24.34■■□□□ 1.49
SMN2-202ENST00000380742 SLC27A3Q5K4L6 730 aa24.34■■□□□ 1.49
SMN2-202ENST00000380742 USP16Q9Y5T5 823 aa24.33■■□□□ 1.49
SMN2-202ENST00000380742 C4BP0C0L5 1744 aa24.32■■□□□ 1.48
SMN2-202ENST00000380742 LINC00116Q8NCU8 138 aa24.31■■□□□ 1.48
SMN2-202ENST00000380742 TWISTNBQ3B726 338 aaPredicted RBP24.3■■□□□ 1.48
SMN2-202ENST00000380742 TEX13AQ9BXU3 409 aaPredicted RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms