RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 ATP2B1P20020 1258 aa23.34■■□□□ 1.33
PCDH8-202ENST00000377942 IMMTQ16891 758 aaKnown RBP23.34■■□□□ 1.33
PCDH8-202ENST00000377942 CEP170Q5SW79 1584 aa23.34■■□□□ 1.33
PCDH8-202ENST00000377942 A0A0U1RQG5 324 aaPredicted RBP23.34■■□□□ 1.33
PCDH8-202ENST00000377942 JAKMIP1Q96N16 626 aaKnown RBP23.34■■□□□ 1.33
PCDH8-202ENST00000377942 CIZ1Q9ULV3 898 aaPredicted RBP23.34■■□□□ 1.33
PCDH8-202ENST00000377942 LRRFIP2Q9Y608 721 aaKnown RBP23.34■■□□□ 1.33
PCDH8-202ENST00000377942 CHRNA2Q15822 529 aa23.33■■□□□ 1.33
PCDH8-202ENST00000377942 ANKRD18BA2A2Z9 1011 aa23.33■■□□□ 1.33
PCDH8-202ENST00000377942 TRAK2O60296 914 aa23.33■■□□□ 1.33
PCDH8-202ENST00000377942 TRPM2O94759 1503 aa23.33■■□□□ 1.32
PCDH8-202ENST00000377942 RBM5P52756 815 aaKnown RBP eCLIP23.32■■□□□ 1.32
PCDH8-202ENST00000377942 TESK2Q96S53 571 aa23.32■■□□□ 1.32
PCDH8-202ENST00000377942 MRE11P49959 708 aa23.32■■□□□ 1.32
PCDH8-202ENST00000377942 CDK5RAP3Q96JB5 506 aa23.32■■□□□ 1.32
PCDH8-202ENST00000377942 U3KPZ7 1027 aaPredicted RBP23.32■■□□□ 1.32
PCDH8-202ENST00000377942 ATP7AQ04656 1500 aa23.32■■□□□ 1.32
PCDH8-202ENST00000377942 NPATQ14207 1427 aa23.32■■□□□ 1.32
PCDH8-202ENST00000377942 ATP2B2Q01814 1243 aa23.32■■□□□ 1.32
PCDH8-202ENST00000377942 ZNF287Q9HBT7 754 aa23.32■■□□□ 1.32
PCDH8-202ENST00000377942 LARP1BQ659C4 914 aaKnown RBP23.31■■□□□ 1.32
PCDH8-202ENST00000377942 FLT4P35916 1363 aa23.31■■□□□ 1.32
PCDH8-202ENST00000377942 SOGA3Q5TF21 947 aa23.31■■□□□ 1.32
PCDH8-202ENST00000377942 PARD3Q8TEW0 1356 aa23.31■■□□□ 1.32
PCDH8-202ENST00000377942 ZCRB1Q8TBF4 217 aaKnown RBP23.31■■□□□ 1.32
PCDH8-202ENST00000377942 KRT85P78386 507 aa23.31■■□□□ 1.32
PCDH8-202ENST00000377942 ABCF2Q9UG63 623 aa23.31■■□□□ 1.32
PCDH8-202ENST00000377942 FIBPO43427 364 aa23.3■■□□□ 1.32
PCDH8-202ENST00000377942 SLC5A1P13866 664 aa23.3■■□□□ 1.32
PCDH8-202ENST00000377942 TMOD2Q9NZR1 351 aa23.3■■□□□ 1.32
PCDH8-202ENST00000377942 PRPF40AO75400 957 aaKnown RBP23.3■■□□□ 1.32
PCDH8-202ENST00000377942 C20orf194Q5TEA3 1177 aa23.3■■□□□ 1.32
PCDH8-202ENST00000377942 PIP4K2AP48426 406 aaPredicted RBP23.3■■□□□ 1.32
PCDH8-202ENST00000377942 STK3Q13188 491 aa23.3■■□□□ 1.32
PCDH8-202ENST00000377942 CWC25Q9NXE8 425 aaPredicted RBP23.3■■□□□ 1.32
PCDH8-202ENST00000377942 MAP3K2Q9Y2U5 619 aa23.3■■□□□ 1.32
PCDH8-202ENST00000377942 AKAP4Q5JQC9 854 aa23.29■■□□□ 1.32
PCDH8-202ENST00000377942 NOL7Q9UMY1 257 aaKnown RBP23.29■■□□□ 1.32
PCDH8-202ENST00000377942 YTHDC2Q9H6S0 1430 aaKnown RBP23.29■■□□□ 1.32
PCDH8-202ENST00000377942 KDM4AO75164 1064 aa23.29■■□□□ 1.32
PCDH8-202ENST00000377942 NUP133Q8WUM0 1156 aa23.29■■□□□ 1.32
PCDH8-202ENST00000377942 WASF1Q92558 559 aa23.29■■□□□ 1.32
PCDH8-202ENST00000377942 FAM83GA6ND36 823 aa23.29■■□□□ 1.32
PCDH8-202ENST00000377942 POLKQ9UBT6 870 aa23.29■■□□□ 1.32
PCDH8-202ENST00000377942 ABCC1P33527 1531 aa23.28■■□□□ 1.32
PCDH8-202ENST00000377942 ZFYVE9O95405 1425 aa23.28■■□□□ 1.32
PCDH8-202ENST00000377942 MAP3K12Q12852 859 aa23.28■■□□□ 1.32
PCDH8-202ENST00000377942 HOMER1Q86YM7 354 aa23.28■■□□□ 1.32
PCDH8-202ENST00000377942 ZBTB3Q9H5J0 574 aa23.27■■□□□ 1.32
PCDH8-202ENST00000377942 PDE4CQ08493 712 aa23.27■■□□□ 1.32
PCDH8-202ENST00000377942 EIF4A2Q14240 407 aaKnown RBP23.27■■□□□ 1.32
PCDH8-202ENST00000377942 CCAR2Q8N163 923 aaKnown RBP23.27■■□□□ 1.32
PCDH8-202ENST00000377942 BOLA2Q9H3K6 86 aa23.27■■□□□ 1.32
PCDH8-202ENST00000377942 R3HCC1Q9Y3T6 440 aaKnown RBP23.27■■□□□ 1.32
PCDH8-202ENST00000377942 PZPP20742 1482 aa23.27■■□□□ 1.32
PCDH8-202ENST00000377942 SAMD9Q5K651 1589 aa23.27■■□□□ 1.32
PCDH8-202ENST00000377942 NEO1Q92859 1461 aa23.27■■□□□ 1.32
PCDH8-202ENST00000377942 CAVIN1Q6NZI2 390 aaKnown RBP23.27■■□□□ 1.32
PCDH8-202ENST00000377942 ZSCAN29Q8IWY8 852 aaPredicted RBP23.26■■□□□ 1.31
PCDH8-202ENST00000377942 CCAR1Q8IX12 1150 aaKnown RBP23.26■■□□□ 1.31
PCDH8-202ENST00000377942 PI4KAP2A4QPH2 592 aa23.26■■□□□ 1.31
PCDH8-202ENST00000377942 SMARCA5O60264 1052 aaPredicted RBP23.26■■□□□ 1.31
PCDH8-202ENST00000377942 PI4KAP1Q8N8J0 262 aa23.26■■□□□ 1.31
PCDH8-202ENST00000377942 PPP1R42Q7Z4L9 355 aa23.26■■□□□ 1.31
PCDH8-202ENST00000377942 MAST1Q9Y2H9 1570 aa23.26■■□□□ 1.31
PCDH8-202ENST00000377942 CDC5LQ99459 802 aaKnown RBP23.25■■□□□ 1.31
PCDH8-202ENST00000377942 EPS15P42566 896 aa23.25■■□□□ 1.31
PCDH8-202ENST00000377942 NASPP49321 788 aaPredicted RBP23.25■■□□□ 1.31
PCDH8-202ENST00000377942 CFAP45Q9UL16 551 aa23.24■■□□□ 1.31
PCDH8-202ENST00000377942 UHRF1BP1Q6BDS2 1440 aa23.24■■□□□ 1.31
PCDH8-202ENST00000377942 ANKRD13DQ6ZTN6 518 aa23.24■■□□□ 1.31
PCDH8-202ENST00000377942 ECHDC1Q9NTX5 307 aa23.24■■□□□ 1.31
PCDH8-202ENST00000377942 KCNA6P17658 529 aa23.23■■□□□ 1.31
PCDH8-202ENST00000377942 FBLN1P23142 703 aa23.23■■□□□ 1.31
PCDH8-202ENST00000377942 STK11IPQ8N1F8 1099 aa23.23■■□□□ 1.31
PCDH8-202ENST00000377942 RPGRQ92834 1020 aaKnown RBP23.23■■□□□ 1.31
PCDH8-202ENST00000377942 TSPY26PQ9H489 355 aa23.23■■□□□ 1.31
PCDH8-202ENST00000377942 PIK3C2GO75747 1445 aa23.23■■□□□ 1.31
PCDH8-202ENST00000377942 FILIP1LQ4L180 1135 aa23.23■■□□□ 1.31
PCDH8-202ENST00000377942 UBAP1LF5GYI3 381 aa23.23■■□□□ 1.31
PCDH8-202ENST00000377942 SMARCC1Q92922 1105 aaPredicted RBP23.23■■□□□ 1.31
PCDH8-202ENST00000377942 ANKIB1Q9P2G1 1089 aa23.23■■□□□ 1.31
PCDH8-202ENST00000377942 HMGB1P09429 215 aaKnown RBP23.23■■□□□ 1.31
PCDH8-202ENST00000377942 AK7Q96M32 723 aa23.23■■□□□ 1.31
PCDH8-202ENST00000377942 ZNF592Q92610 1267 aa23.22■■□□□ 1.31
PCDH8-202ENST00000377942 FAM13BQ9NYF5 915 aa23.22■■□□□ 1.31
PCDH8-202ENST00000377942 CASTP20810 708 aaKnown RBP23.22■■□□□ 1.31
PCDH8-202ENST00000377942 SLF2Q8IX21 1173 aa23.22■■□□□ 1.31
PCDH8-202ENST00000377942 CCDC8Q9H0W5 538 aaPredicted RBP23.22■■□□□ 1.31
PCDH8-202ENST00000377942 ME1P48163 572 aa23.22■■□□□ 1.31
PCDH8-202ENST00000377942 SPINK5Q9NQ38 1064 aaPredicted RBP23.22■■□□□ 1.31
PCDH8-202ENST00000377942 OFD1O75665 1012 aa23.21■■□□□ 1.31
PCDH8-202ENST00000377942 EVI5LQ96CN4 794 aa23.21■■□□□ 1.31
PCDH8-202ENST00000377942 GPTP24298 496 aa23.21■■□□□ 1.31
PCDH8-202ENST00000377942 NAPBQ9H115 298 aa23.21■■□□□ 1.31
PCDH8-202ENST00000377942 GPS2Q13227 327 aa23.21■■□□□ 1.31
PCDH8-202ENST00000377942 ALDH1L1O75891 902 aa23.21■■□□□ 1.31
PCDH8-202ENST00000377942 CCDC39Q9UFE4 941 aa23.21■■□□□ 1.31
PCDH8-202ENST00000377942 KRT18P05783 430 aaKnown RBP23.2■■□□□ 1.31
PCDH8-202ENST00000377942 CEBPZQ03701 1054 aaKnown RBP23.2■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms