RNA–Protein interactions for RNA: ENST00000374389.8

SRRM1-202, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,110 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-202ENST00000374389 NUTM2GQ5VZR2 741 aa6.69□□□□□ -1.34
SRRM1-202ENST00000374389 NGDNQ8NEJ9 315 aaKnown RBP6.69□□□□□ -1.34
SRRM1-202ENST00000374389 IGSF1Q8N6C5 1336 aa6.69□□□□□ -1.34
SRRM1-202ENST00000374389 TTC21AQ8NDW8 1320 aa6.69□□□□□ -1.34
SRRM1-202ENST00000374389 FLT4P35916 1363 aa6.69□□□□□ -1.34
SRRM1-202ENST00000374389 KIF24Q5T7B8 1368 aa6.69□□□□□ -1.34
SRRM1-202ENST00000374389 CEP85Q6P2H3 762 aa6.69□□□□□ -1.34
SRRM1-202ENST00000374389 PLEKHM2Q8IWE5 1019 aa6.69□□□□□ -1.34
SRRM1-202ENST00000374389 DCTPP1Q9H773 170 aa6.69□□□□□ -1.34
SRRM1-202ENST00000374389 RTL1A6NKG5 1358 aa6.69□□□□□ -1.34
SRRM1-202ENST00000374389 NCOA3Q9Y6Q9 1424 aa6.68□□□□□ -1.34
SRRM1-202ENST00000374389 PIK3C2AO00443 1686 aa6.68□□□□□ -1.34
SRRM1-202ENST00000374389 DDIT3P35638 169 aa6.68□□□□□ -1.34
SRRM1-202ENST00000374389 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.68□□□□□ -1.34
SRRM1-202ENST00000374389 ANKRD44Q8N8A2 993 aa6.68□□□□□ -1.34
SRRM1-202ENST00000374389 CHMP4BQ9H444 224 aaKnown RBP6.68□□□□□ -1.34
SRRM1-202ENST00000374389 SSUH2Q9Y2M2 353 aa6.68□□□□□ -1.34
SRRM1-202ENST00000374389 F6X3S4 739 aa6.68□□□□□ -1.34
SRRM1-202ENST00000374389 SMARCA5O60264 1052 aaPredicted RBP6.67□□□□□ -1.34
SRRM1-202ENST00000374389 PRKAR2AP13861 404 aaKnown RBP6.67□□□□□ -1.34
SRRM1-202ENST00000374389 AMPHP49418 695 aa6.67□□□□□ -1.34
SRRM1-202ENST00000374389 NWD1Q149M9 1564 aa6.67□□□□□ -1.34
SRRM1-202ENST00000374389 NLRP6P59044 892 aa6.67□□□□□ -1.34
SRRM1-202ENST00000374389 HSCBQ8IWL3 235 aa6.67□□□□□ -1.34
SRRM1-202ENST00000374389 TSPYL4Q9UJ04 414 aa6.67□□□□□ -1.34
SRRM1-202ENST00000374389 XRN1Q8IZH2 1706 aaKnown RBP6.67□□□□□ -1.34
SRRM1-202ENST00000374389 RGPD8O14715 1765 aaPredicted RBP6.67□□□□□ -1.34
SRRM1-202ENST00000374389 APBB1O00213 710 aa6.67□□□□□ -1.34
SRRM1-202ENST00000374389 MCM4P33991 863 aa6.67□□□□□ -1.34
SRRM1-202ENST00000374389 FXR2P51116 673 aaKnown RBP eCLIP6.67□□□□□ -1.345e-6■■■□□ 14.9
SRRM1-202ENST00000374389 SNX21Q969T3 373 aa6.67□□□□□ -1.34
SRRM1-202ENST00000374389 RBM33Q96EV2 1170 aaKnown RBP6.67□□□□□ -1.34
SRRM1-202ENST00000374389 CHMP5Q9NZZ3 219 aa6.67□□□□□ -1.34
SRRM1-202ENST00000374389 HOXC9P31274 260 aa6.66□□□□□ -1.34
SRRM1-202ENST00000374389 PTPRCP08575 1304 aa6.66□□□□□ -1.34
SRRM1-202ENST00000374389 CDC45O75419 566 aa6.66□□□□□ -1.34
SRRM1-202ENST00000374389 TTC22Q5TAA0 569 aa6.66□□□□□ -1.34
SRRM1-202ENST00000374389 THEMISQ8N1K5 641 aaPredicted RBP6.66□□□□□ -1.34
SRRM1-202ENST00000374389 FMN2Q9NZ56 1722 aa6.66□□□□□ -1.34
SRRM1-202ENST00000374389 MARF1Q9Y4F3 1742 aaKnown RBP6.66□□□□□ -1.34
SRRM1-202ENST00000374389 SLC4A10Q6U841 1118 aa6.65□□□□□ -1.34
SRRM1-202ENST00000374389 RPAP2Q8IXW5 612 aaPredicted RBP6.65□□□□□ -1.34
SRRM1-202ENST00000374389 USHBP1Q8N6Y0 703 aa6.65□□□□□ -1.34
SRRM1-202ENST00000374389 IL17REQ8NFR9 667 aa6.65□□□□□ -1.34
SRRM1-202ENST00000374389 RTF1Q92541 710 aaKnown RBP6.65□□□□□ -1.34
SRRM1-202ENST00000374389 ANKARQ7Z5J8 1434 aa6.65□□□□□ -1.34
SRRM1-202ENST00000374389 NECTIN2Q92692 538 aa6.65□□□□□ -1.34
SRRM1-202ENST00000374389 LTV1Q96GA3 475 aaPredicted RBP6.65□□□□□ -1.34
SRRM1-202ENST00000374389 GAS2L2Q8NHY3 880 aa6.65□□□□□ -1.35
SRRM1-202ENST00000374389 FER1L4A9Z1Z3 1794 aa6.64□□□□□ -1.35
SRRM1-202ENST00000374389 LRRC37A3O60309 1634 aa6.64□□□□□ -1.35
SRRM1-202ENST00000374389 SDSP20132 328 aa6.64□□□□□ -1.35
SRRM1-202ENST00000374389 ABTB2Q8N961 1025 aa6.64□□□□□ -1.35
SRRM1-202ENST00000374389 FLIIQ13045 1269 aa6.63□□□□□ -1.35
SRRM1-202ENST00000374389 TSHZ3Q63HK5 1081 aa6.63□□□□□ -1.35
SRRM1-202ENST00000374389 SPDYE1Q8NFV5 336 aaPredicted RBP6.63□□□□□ -1.35
SRRM1-202ENST00000374389 GZF1Q9H116 711 aaPredicted RBP6.63□□□□□ -1.35
SRRM1-202ENST00000374389 GNAT3A8MTJ3 354 aa6.63□□□□□ -1.35
SRRM1-202ENST00000374389 HSP90AB1P08238 724 aaKnown RBP6.63□□□□□ -1.35
SRRM1-202ENST00000374389 TNPO1Q92973 898 aaKnown RBP6.63□□□□□ -1.35
SRRM1-202ENST00000374389 MAP3K5Q99683 1374 aa6.63□□□□□ -1.35
SRRM1-202ENST00000374389 PNMA6EA0A0J9YXQ4 647 aa6.63□□□□□ -1.35
SRRM1-202ENST00000374389 K7ELQ4 463 aaPredicted RBP6.63□□□□□ -1.35
SRRM1-202ENST00000374389 USP26Q9BXU7 913 aa6.63□□□□□ -1.35
SRRM1-202ENST00000374389 EXOC6BQ9Y2D4 811 aa6.63□□□□□ -1.35
SRRM1-202ENST00000374389 TRAK2O60296 914 aa6.62□□□□□ -1.35
SRRM1-202ENST00000374389 POTEIP0CG38 1075 aa6.62□□□□□ -1.35
SRRM1-202ENST00000374389 CCT4P50991 539 aaKnown RBP6.62□□□□□ -1.35
SRRM1-202ENST00000374389 SALL3Q9BXA9 1300 aa6.62□□□□□ -1.35
SRRM1-202ENST00000374389 FSD2A1L4K1 749 aa6.62□□□□□ -1.35
SRRM1-202ENST00000374389 HTATSF1O43719 755 aaKnown RBP6.62□□□□□ -1.35
SRRM1-202ENST00000374389 FKBP5Q13451 457 aaPredicted RBP6.62□□□□□ -1.35
SRRM1-202ENST00000374389 RAB3GAP1Q15042 981 aa6.62□□□□□ -1.35
SRRM1-202ENST00000374389 PHF8Q9UPP1 1060 aa6.62□□□□□ -1.35
SRRM1-202ENST00000374389 FAM208AQ9UK61 1670 aaKnown RBP6.62□□□□□ -1.35
SRRM1-202ENST00000374389 SPDYE4A6NLX3 237 aa6.61□□□□□ -1.35
SRRM1-202ENST00000374389 NBPF6Q5VWK0 638 aa6.61□□□□□ -1.35
SRRM1-202ENST00000374389 NBPF4Q96M43 638 aa6.61□□□□□ -1.35
SRRM1-202ENST00000374389 STK31Q9BXU1 1019 aa6.61□□□□□ -1.35
SRRM1-202ENST00000374389 NFAT5O94916 1531 aa6.61□□□□□ -1.35
SRRM1-202ENST00000374389 GNAI2P04899 355 aa6.61□□□□□ -1.35
SRRM1-202ENST00000374389 PDE1AP54750 535 aa6.61□□□□□ -1.35
SRRM1-202ENST00000374389 CCDC30Q5VVM6 783 aa6.61□□□□□ -1.35
SRRM1-202ENST00000374389 PHAXQ9H814 394 aaKnown RBP6.61□□□□□ -1.35
SRRM1-202ENST00000374389 USP54Q70EL1 1684 aa6.61□□□□□ -1.35
SRRM1-202ENST00000374389 KCNQ3O43525 872 aa6.61□□□□□ -1.35
SRRM1-202ENST00000374389 PRR29P0C7W0 189 aa6.61□□□□□ -1.35
SRRM1-202ENST00000374389 SSFA2P28290 1259 aa6.61□□□□□ -1.35
SRRM1-202ENST00000374389 RBM10P98175 930 aaKnown RBP6.61□□□□□ -1.35
SRRM1-202ENST00000374389 TAF7Q15545 349 aaPredicted RBP6.61□□□□□ -1.35
SRRM1-202ENST00000374389 LGR6Q9HBX8 967 aa6.61□□□□□ -1.35
SRRM1-202ENST00000374389 CIZ1Q9ULV3 898 aaPredicted RBP6.61□□□□□ -1.35
SRRM1-202ENST00000374389 CEMIPQ8WUJ3 1361 aa6.6□□□□□ -1.35
SRRM1-202ENST00000374389 XRCC6P12956 609 aaKnown RBP eCLIP6.6□□□□□ -1.35
SRRM1-202ENST00000374389 LRRC59Q96AG4 307 aaKnown RBP6.6□□□□□ -1.35
SRRM1-202ENST00000374389 PANK2Q9BZ23 570 aa6.6□□□□□ -1.35
SRRM1-202ENST00000374389 USP44Q9H0E7 712 aa6.6□□□□□ -1.35
SRRM1-202ENST00000374389 OSBPL3Q9H4L5 887 aa6.6□□□□□ -1.35
SRRM1-202ENST00000374389 LRRFIP2Q9Y608 721 aaKnown RBP6.6□□□□□ -1.35
SRRM1-202ENST00000374389 HMMRO75330 724 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms