RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 EZH2Q15910 746 aaKnown RBP26.79■■□□□ 1.88
SYNC-201ENST00000373484 PNISRQ8TF01 805 aaKnown RBP26.79■■□□□ 1.88
SYNC-201ENST00000373484 NUP188Q5SRE5 1749 aa26.78■■□□□ 1.88
SYNC-201ENST00000373484 SIPA1L3O60292 1781 aaPredicted RBP26.78■■□□□ 1.88
SYNC-201ENST00000373484 RNMTO43148 476 aaKnown RBP26.78■■□□□ 1.88
SYNC-201ENST00000373484 PIGBQ92521 554 aa26.78■■□□□ 1.88
SYNC-201ENST00000373484 LGR6Q9HBX8 967 aa26.78■■□□□ 1.88
SYNC-201ENST00000373484 TMOD3Q9NYL9 352 aa26.78■■□□□ 1.88
SYNC-201ENST00000373484 CCDC146Q8IYE0 955 aa26.76■■□□□ 1.87
SYNC-201ENST00000373484 CABP4P57796 275 aa26.75■■□□□ 1.87
SYNC-201ENST00000373484 RUNDC1Q96C34 613 aa26.75■■□□□ 1.87
SYNC-201ENST00000373484 NFE2L2Q16236 605 aa26.74■■□□□ 1.87
SYNC-201ENST00000373484 IL17REQ8NFR9 667 aa26.74■■□□□ 1.87
SYNC-201ENST00000373484 CEMIPQ8WUJ3 1361 aa26.73■■□□□ 1.87
SYNC-201ENST00000373484 PAPPAQ13219 1627 aa26.72■■□□□ 1.87
SYNC-201ENST00000373484 SLC52A2Q9HAB3 445 aa26.72■■□□□ 1.87
SYNC-201ENST00000373484 HTATSF1O43719 755 aaKnown RBP26.72■■□□□ 1.87
SYNC-201ENST00000373484 PROM2Q8N271 834 aa26.72■■□□□ 1.87
SYNC-201ENST00000373484 NFATC2IPQ8NCF5 419 aa26.72■■□□□ 1.87
SYNC-201ENST00000373484 TXNRD1Q16881 649 aa26.71■■□□□ 1.87
SYNC-201ENST00000373484 RNF123Q5XPI4 1314 aa26.7■■□□□ 1.87
SYNC-201ENST00000373484 RTF1Q92541 710 aaKnown RBP26.7■■□□□ 1.87
SYNC-201ENST00000373484 PALLDQ8WX93 1383 aa26.7■■□□□ 1.86
SYNC-201ENST00000373484 TMPOP42166 694 aaKnown RBP26.69■■□□□ 1.86
SYNC-201ENST00000373484 SMARCC1Q92922 1105 aaPredicted RBP26.69■■□□□ 1.86
SYNC-201ENST00000373484 ASAP1Q9ULH1 1129 aa26.69■■□□□ 1.86
SYNC-201ENST00000373484 TAF1LQ8IZX4 1826 aa26.68■■□□□ 1.86
SYNC-201ENST00000373484 BCL11AQ9H165 835 aa26.68■■□□□ 1.86
SYNC-201ENST00000373484 FAM9BQ8IZU0 186 aa26.67■■□□□ 1.86
SYNC-201ENST00000373484 ATG3Q9NT62 314 aa26.67■■□□□ 1.86
SYNC-201ENST00000373484 ERICH6Q7L0X2 663 aa26.67■■□□□ 1.86
SYNC-201ENST00000373484 MCM10Q7L590 875 aa26.67■■□□□ 1.86
SYNC-201ENST00000373484 ZNF831Q5JPB2 1677 aa26.66■■□□□ 1.86
SYNC-201ENST00000373484 RIPK4P57078 832 aa26.66■■□□□ 1.86
SYNC-201ENST00000373484 IRX6P78412 446 aaPredicted RBP26.66■■□□□ 1.86
SYNC-201ENST00000373484 TEFQ10587 303 aa26.66■■□□□ 1.86
SYNC-201ENST00000373484 UBR2Q8IWV8 1755 aa26.66■■□□□ 1.86
SYNC-201ENST00000373484 DCTN1Q14203 1278 aa26.65■■□□□ 1.86
SYNC-201ENST00000373484 SLC27A3Q5K4L6 730 aa26.65■■□□□ 1.86
SYNC-201ENST00000373484 C5P01031 1676 aa26.65■■□□□ 1.86
SYNC-201ENST00000373484 LRRC4BQ9NT99 713 aa26.64■■□□□ 1.85
SYNC-201ENST00000373484 RRP7AQ9Y3A4 280 aaKnown RBP26.64■■□□□ 1.85
SYNC-201ENST00000373484 APAF1O14727 1248 aa26.62■■□□□ 1.85
SYNC-201ENST00000373484 CCNL1Q9UK58 526 aaPredicted RBP26.62■■□□□ 1.85
SYNC-201ENST00000373484 LMOD3Q0VAK6 560 aa26.61■■□□□ 1.85
SYNC-201ENST00000373484 NEUROD2Q15784 382 aa26.61■■□□□ 1.85
SYNC-201ENST00000373484 CICQ96RK0 1608 aaPredicted RBP26.61■■□□□ 1.85
SYNC-201ENST00000373484 LOC102724428A0A0B4J2F2 783 aa26.6■■□□□ 1.85
SYNC-201ENST00000373484 SIK1P57059 783 aa26.6■■□□□ 1.85
SYNC-201ENST00000373484 KCNQ4P56696 695 aa26.59■■□□□ 1.85
SYNC-201ENST00000373484 KCPQ6ZWJ8 1503 aa26.59■■□□□ 1.85
SYNC-201ENST00000373484 KDM3BQ7LBC6 1761 aa26.59■■□□□ 1.85
SYNC-201ENST00000373484 COL5A3P25940 1745 aaPredicted RBP26.58■■□□□ 1.85
SYNC-201ENST00000373484 SLC39A6Q13433 755 aa26.58■■□□□ 1.85
SYNC-201ENST00000373484 TRIM35Q9UPQ4 493 aa26.58■■□□□ 1.85
SYNC-201ENST00000373484 THUMPD2Q9BTF0 503 aaKnown RBP26.58■■□□□ 1.84
SYNC-201ENST00000373484 TJP1Q07157 1748 aa26.57■■□□□ 1.84
SYNC-201ENST00000373484 BTBD11A6QL63 1104 aa26.55■■□□□ 1.84
SYNC-201ENST00000373484 NBPF14Q5TI25 921 aa26.55■■□□□ 1.84
SYNC-201ENST00000373484 SLC4A9Q96Q91 983 aa26.55■■□□□ 1.84
SYNC-201ENST00000373484 RBM42Q9BTD8 480 aaKnown RBP26.55■■□□□ 1.84
SYNC-201ENST00000373484 ANO8Q9HCE9 1232 aaPredicted RBP26.55■■□□□ 1.84
SYNC-201ENST00000373484 C4BP0C0L5 1744 aa26.55■■□□□ 1.84
SYNC-201ENST00000373484 TUBGCP6Q96RT7 1819 aa26.55■■□□□ 1.84
SYNC-201ENST00000373484 PTCD1O75127 700 aaKnown RBP26.55■■□□□ 1.84
SYNC-201ENST00000373484 TAF7Q15545 349 aaPredicted RBP26.55■■□□□ 1.84
SYNC-201ENST00000373484 QSER1Q2KHR3 1735 aa26.54■■□□□ 1.84
SYNC-201ENST00000373484 ZNF790Q6PG37 636 aa26.54■■□□□ 1.84
SYNC-201ENST00000373484 ATP6V1AP38606 617 aa26.53■■□□□ 1.84
SYNC-201ENST00000373484 TTC5Q8N0Z6 440 aa26.53■■□□□ 1.84
SYNC-201ENST00000373484 HMGB2P26583 209 aaKnown RBP26.52■■□□□ 1.84
SYNC-201ENST00000373484 ITPK1Q13572 414 aa26.52■■□□□ 1.84
SYNC-201ENST00000373484 B4GALNT3Q6L9W6 998 aa26.51■■□□□ 1.83
SYNC-201ENST00000373484 SLC15A2Q16348 729 aa26.5■■□□□ 1.83
SYNC-201ENST00000373484 ZNF827Q17R98 1081 aa26.5■■□□□ 1.83
SYNC-201ENST00000373484 AKT1S1Q96B36 256 aa26.5■■□□□ 1.83
SYNC-201ENST00000373484 STK32BQ9NY57 414 aa26.5■■□□□ 1.83
SYNC-201ENST00000373484 UBR3Q6ZT12 1888 aa26.49■■□□□ 1.83
SYNC-201ENST00000373484 MYH14Q7Z406 1995 aaKnown RBP26.49■■□□□ 1.83
SYNC-201ENST00000373484 KCNQ3O43525 872 aa26.49■■□□□ 1.83
SYNC-201ENST00000373484 NCBP3Q53F19 620 aaKnown RBP26.49■■□□□ 1.83
SYNC-201ENST00000373484 LINC00116Q8NCU8 138 aa26.49■■□□□ 1.83
SYNC-201ENST00000373484 ZNF496Q96IT1 587 aaPredicted RBP26.49■■□□□ 1.83
SYNC-201ENST00000373484 R3HDM1Q15032 1099 aaKnown RBP26.48■■□□□ 1.83
SYNC-201ENST00000373484 VSIG10Q8N0Z9 540 aa26.48■■□□□ 1.83
SYNC-201ENST00000373484 MIS18AQ9NYP9 233 aa26.48■■□□□ 1.83
SYNC-201ENST00000373484 SENP3-EIF4A1A0A087X0R7 540 aa26.47■■□□□ 1.83
SYNC-201ENST00000373484 CCDC27Q2M243 656 aa26.47■■□□□ 1.83
SYNC-201ENST00000373484 FMNL2Q96PY5 1086 aa26.46■■□□□ 1.83
SYNC-201ENST00000373484 HEG1Q9ULI3 1381 aa26.46■■□□□ 1.83
SYNC-201ENST00000373484 PSDA5PKW4 1024 aaPredicted RBP26.46■■□□□ 1.83
SYNC-201ENST00000373484 BABAM1Q9NWV8 329 aa26.46■■□□□ 1.83
SYNC-201ENST00000373484 CASZ1Q86V15 1759 aa26.46■■□□□ 1.83
SYNC-201ENST00000373484 DNAJC10Q8IXB1 793 aa26.43■■□□□ 1.82
SYNC-201ENST00000373484 TSPYL4Q9UJ04 414 aa26.43■■□□□ 1.82
SYNC-201ENST00000373484 LAMB4A4D0S4 1761 aa26.43■■□□□ 1.82
SYNC-201ENST00000373484 CALD1Q05682 793 aaKnown RBP26.42■■□□□ 1.82
SYNC-201ENST00000373484 WWC1Q8IX03 1113 aa26.42■■□□□ 1.82
SYNC-201ENST00000373484 CNTNAP4Q9C0A0 1308 aa26.42■■□□□ 1.82
SYNC-201ENST00000373484 NGEFQ8N5V2 710 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms