RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 PRKAR2BP31323 418 aa10.58□□□□□ -0.72
SMARCA1-203ENST00000371123 NRBP1Q9UHY1 535 aa10.58□□□□□ -0.72
SMARCA1-203ENST00000371123 RPAP1Q9BWH6 1393 aaPredicted RBP10.58□□□□□ -0.72
SMARCA1-203ENST00000371123 EFCAB6Q5THR3 1501 aa10.58□□□□□ -0.72
SMARCA1-203ENST00000371123 RAPGEF3O95398 923 aa10.57□□□□□ -0.72
SMARCA1-203ENST00000371123 TMX3Q96JJ7 454 aa10.57□□□□□ -0.72
SMARCA1-203ENST00000371123 IL25Q9H293 177 aa10.57□□□□□ -0.72
SMARCA1-203ENST00000371123 KIAA1210Q9ULL0 1709 aa10.57□□□□□ -0.72
SMARCA1-203ENST00000371123 KDM4AO75164 1064 aa10.57□□□□□ -0.72
SMARCA1-203ENST00000371123 CDC45O75419 566 aa10.57□□□□□ -0.72
SMARCA1-203ENST00000371123 SLC20A2Q08357 652 aa10.57□□□□□ -0.72
SMARCA1-203ENST00000371123 LRRN4CLQ8ND94 238 aa10.57□□□□□ -0.72
SMARCA1-203ENST00000371123 TTC22Q5TAA0 569 aa10.56□□□□□ -0.72
SMARCA1-203ENST00000371123 ANKRD36BQ8N2N9 1353 aa10.56□□□□□ -0.72
SMARCA1-203ENST00000371123 IFT172Q9UG01 1749 aa10.56□□□□□ -0.72
SMARCA1-203ENST00000371123 PIK3R4Q99570 1358 aa10.56□□□□□ -0.72
SMARCA1-203ENST00000371123 FAM83GA6ND36 823 aa10.56□□□□□ -0.72
SMARCA1-203ENST00000371123 CHRM1P11229 460 aaPredicted RBP10.56□□□□□ -0.72
SMARCA1-203ENST00000371123 SDSP20132 328 aa10.56□□□□□ -0.72
SMARCA1-203ENST00000371123 USP32Q8NFA0 1604 aa10.56□□□□□ -0.72
SMARCA1-203ENST00000371123 PREX1Q8TCU6 1659 aa10.56□□□□□ -0.72
SMARCA1-203ENST00000371123 PPFIA3O75145 1194 aa10.56□□□□□ -0.72
SMARCA1-203ENST00000371123 TMPOP42166 694 aaKnown RBP10.56□□□□□ -0.72
SMARCA1-203ENST00000371123 CLTCQ00610 1675 aaKnown RBP10.56□□□□□ -0.72
SMARCA1-203ENST00000371123 ERICH4A6NGS2 130 aa10.55□□□□□ -0.72
SMARCA1-203ENST00000371123 SPC24Q8NBT2 197 aa10.55□□□□□ -0.72
SMARCA1-203ENST00000371123 FEZ1Q99689 392 aa10.55□□□□□ -0.72
SMARCA1-203ENST00000371123 IPO8O15397 1037 aaKnown RBP10.55□□□□□ -0.72
SMARCA1-203ENST00000371123 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.55□□□□□ -0.729e-7■□□□□ 10
SMARCA1-203ENST00000371123 PPP6R1Q9UPN7 881 aa10.55□□□□□ -0.72
SMARCA1-203ENST00000371123 V9GYY5 206 aaPredicted RBP10.55□□□□□ -0.72
SMARCA1-203ENST00000371123 USP27XA6NNY8 438 aa10.55□□□□□ -0.72
SMARCA1-203ENST00000371123 PTGS1P23219 599 aa10.55□□□□□ -0.72
SMARCA1-203ENST00000371123 KRT24Q2M2I5 525 aa10.55□□□□□ -0.72
SMARCA1-203ENST00000371123 CABP1Q9NZU7 370 aa10.55□□□□□ -0.72
SMARCA1-203ENST00000371123 GABPB1Q06547 395 aaPredicted RBP10.54□□□□□ -0.72
SMARCA1-203ENST00000371123 HDGFL2Q7Z4V5 671 aaPredicted RBP10.54□□□□□ -0.72
SMARCA1-203ENST00000371123 WAPLQ7Z5K2 1190 aa10.54□□□□□ -0.72
SMARCA1-203ENST00000371123 RGS22Q8NE09 1264 aa10.54□□□□□ -0.72
SMARCA1-203ENST00000371123 FEZ2Q9UHY8 353 aaPredicted RBP10.54□□□□□ -0.72
SMARCA1-203ENST00000371123 TRPM2O94759 1503 aa10.54□□□□□ -0.72
SMARCA1-203ENST00000371123 ATP10DQ9P241 1426 aa10.54□□□□□ -0.72
SMARCA1-203ENST00000371123 CUL4AQ13619 759 aa10.54□□□□□ -0.72
SMARCA1-203ENST00000371123 CWC22Q9HCG8 908 aaKnown RBP10.54□□□□□ -0.72
SMARCA1-203ENST00000371123 CNPY2Q9Y2B0 182 aa10.54□□□□□ -0.72
SMARCA1-203ENST00000371123 GIMAP6Q6P9H5 292 aa10.53□□□□□ -0.72
SMARCA1-203ENST00000371123 SLC52A1Q9NWF4 448 aa10.53□□□□□ -0.72
SMARCA1-203ENST00000371123 DIAPH1O60610 1272 aaKnown RBP10.53□□□□□ -0.72
SMARCA1-203ENST00000371123 TRIM34Q9BYJ4 488 aa10.53□□□□□ -0.72
SMARCA1-203ENST00000371123 ANO2Q9NQ90 1003 aa10.53□□□□□ -0.72
SMARCA1-203ENST00000371123 PTCH1Q13635 1447 aa10.53□□□□□ -0.72
SMARCA1-203ENST00000371123 TULP1O00294 542 aaPredicted RBP10.53□□□□□ -0.72
SMARCA1-203ENST00000371123 MRPL50Q8N5N7 158 aaKnown RBP10.53□□□□□ -0.72
SMARCA1-203ENST00000371123 SECISBP2LQ93073 1101 aaKnown RBP10.53□□□□□ -0.72
SMARCA1-203ENST00000371123 PRAM1Q96QH2 718 aa10.53□□□□□ -0.72
SMARCA1-203ENST00000371123 LCMT1Q9UIC8 334 aa10.53□□□□□ -0.72
SMARCA1-203ENST00000371123 QRICH2Q9H0J4 1663 aa10.53□□□□□ -0.72
SMARCA1-203ENST00000371123 TSGA10IPQ3SY00 556 aa10.52□□□□□ -0.72
SMARCA1-203ENST00000371123 ZRANB1Q9UGI0 708 aa10.52□□□□□ -0.72
SMARCA1-203ENST00000371123 HNRNPH2P55795 449 aaKnown RBP10.52□□□□□ -0.73
SMARCA1-203ENST00000371123 ARID5BQ14865 1188 aa10.52□□□□□ -0.73
SMARCA1-203ENST00000371123 FBXO38Q6PIJ6 1188 aa10.52□□□□□ -0.73
SMARCA1-203ENST00000371123 SRCIN1Q9C0H9 1055 aa10.52□□□□□ -0.73
SMARCA1-203ENST00000371123 ABCC11Q96J66 1382 aa10.52□□□□□ -0.73
SMARCA1-203ENST00000371123 CASC1Q6TDU7 716 aa10.52□□□□□ -0.73
SMARCA1-203ENST00000371123 DRC7Q8IY82 874 aa10.52□□□□□ -0.73
SMARCA1-203ENST00000371123 RTF1Q92541 710 aaKnown RBP10.52□□□□□ -0.73
SMARCA1-203ENST00000371123 C16orf45Q96MC5 204 aaPredicted RBP10.52□□□□□ -0.73
SMARCA1-203ENST00000371123 NPATQ14207 1427 aa10.52□□□□□ -0.73
SMARCA1-203ENST00000371123 NCKAP5LQ9HCH0 1330 aa10.52□□□□□ -0.73
SMARCA1-203ENST00000371123 TAF3Q5VWG9 929 aa10.52□□□□□ -0.73
SMARCA1-203ENST00000371123 GCC1Q96CN9 775 aa10.52□□□□□ -0.73
SMARCA1-203ENST00000371123 ABCC4O15439 1325 aa10.51□□□□□ -0.73
SMARCA1-203ENST00000371123 F6X3S4 739 aa10.51□□□□□ -0.73
SMARCA1-203ENST00000371123 CCDC144BQ3MJ40 725 aa10.51□□□□□ -0.73
SMARCA1-203ENST00000371123 CCDC144CPQ8IYA2 1237 aa10.51□□□□□ -0.73
SMARCA1-203ENST00000371123 UPF3BQ9BZI7 483 aaKnown RBP10.51□□□□□ -0.73
SMARCA1-203ENST00000371123 RIMS1Q86UR5 1692 aaKnown RBP10.51□□□□□ -0.73
SMARCA1-203ENST00000371123 RGS12O14924 1447 aa10.51□□□□□ -0.73
SMARCA1-203ENST00000371123 TXNDC2Q86VQ3 553 aa10.51□□□□□ -0.73
SMARCA1-203ENST00000371123 EXOC6BQ9Y2D4 811 aa10.51□□□□□ -0.73
SMARCA1-203ENST00000371123 VAMP4O75379 141 aa10.51□□□□□ -0.73
SMARCA1-203ENST00000371123 MBD3O95983 291 aa10.51□□□□□ -0.73
SMARCA1-203ENST00000371123 GYS2P54840 703 aa10.51□□□□□ -0.73
SMARCA1-203ENST00000371123 COL9A3Q14050 684 aaPredicted RBP10.51□□□□□ -0.73
SMARCA1-203ENST00000371123 UVSSAQ2YD98 709 aa10.51□□□□□ -0.73
SMARCA1-203ENST00000371123 RTL1A6NKG5 1358 aa10.5□□□□□ -0.73
SMARCA1-203ENST00000371123 AEBP1Q8IUX7 1158 aa10.5□□□□□ -0.73
SMARCA1-203ENST00000371123 IL1RAPL2Q9NP60 686 aa10.5□□□□□ -0.73
SMARCA1-203ENST00000371123 PRR29P0C7W0 189 aa10.5□□□□□ -0.73
SMARCA1-203ENST00000371123 MCM10Q7L590 875 aa10.5□□□□□ -0.73
SMARCA1-203ENST00000371123 ADGRB1O14514 1584 aa10.5□□□□□ -0.73
SMARCA1-203ENST00000371123 AATKQ6ZMQ8 1374 aa10.5□□□□□ -0.73
SMARCA1-203ENST00000371123 CT47B1P0C2W7 299 aaPredicted RBP10.5□□□□□ -0.73
SMARCA1-203ENST00000371123 STK11IPQ8N1F8 1099 aa10.5□□□□□ -0.73
SMARCA1-203ENST00000371123 KIF1BPQ96EK5 621 aa10.49□□□□□ -0.73
SMARCA1-203ENST00000371123 DCTPP1Q9H773 170 aa10.49□□□□□ -0.73
SMARCA1-203ENST00000371123 EMILIN1Q9Y6C2 1016 aa10.49□□□□□ -0.73
SMARCA1-203ENST00000371123 CYP2C19P33261 490 aa10.49□□□□□ -0.73
SMARCA1-203ENST00000371123 NEK4P51957 841 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms