RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 KMT5BQ4FZB7 885 aa9.54□□□□□ -0.88
ECHDC1-202ENST00000368289 EHBP1L1Q8N3D4 1523 aa9.54□□□□□ -0.88
ECHDC1-202ENST00000368289 TSPY4P0CV99 314 aa9.53□□□□□ -0.88
ECHDC1-202ENST00000368289 TSPY10P0CW01 314 aa9.53□□□□□ -0.88
ECHDC1-202ENST00000368289 XPCQ01831 940 aaPredicted RBP9.53□□□□□ -0.88
ECHDC1-202ENST00000368289 SLC52A1Q9NWF4 448 aa9.53□□□□□ -0.88
ECHDC1-202ENST00000368289 TSR3Q9UJK0 312 aaKnown RBP9.53□□□□□ -0.88
ECHDC1-202ENST00000368289 CHD4Q14839 1912 aa9.52□□□□□ -0.88
ECHDC1-202ENST00000368289 METP08581 1390 aa9.52□□□□□ -0.88
ECHDC1-202ENST00000368289 SLC10A3P09131 477 aa9.52□□□□□ -0.89
ECHDC1-202ENST00000368289 RGPD1P0DJD0 1748 aa9.52□□□□□ -0.89
ECHDC1-202ENST00000368289 GCGRP47871 477 aa9.52□□□□□ -0.89
ECHDC1-202ENST00000368289 GRIPAP1Q4V328 841 aa9.52□□□□□ -0.89
ECHDC1-202ENST00000368289 VPS8Q8N3P4 1428 aa9.52□□□□□ -0.89
ECHDC1-202ENST00000368289 HPS5Q9UPZ3 1129 aa9.52□□□□□ -0.89
ECHDC1-202ENST00000368289 TMEM131LA2VDJ0 1609 aa9.52□□□□□ -0.89
ECHDC1-202ENST00000368289 LMTK2Q8IWU2 1503 aa9.51□□□□□ -0.89
ECHDC1-202ENST00000368289 NUP188Q5SRE5 1749 aa9.51□□□□□ -0.89
ECHDC1-202ENST00000368289 NALCNQ8IZF0 1738 aa9.51□□□□□ -0.89
ECHDC1-202ENST00000368289 SHANK3Q9BYB0 1731 aa9.51□□□□□ -0.89
ECHDC1-202ENST00000368289 NRKQ7Z2Y5 1582 aa9.51□□□□□ -0.89
ECHDC1-202ENST00000368289 TRIM37O94972 964 aa9.51□□□□□ -0.89
ECHDC1-202ENST00000368289 PRELPP51888 382 aa9.51□□□□□ -0.89
ECHDC1-202ENST00000368289 USP46P62068 366 aa9.51□□□□□ -0.89
ECHDC1-202ENST00000368289 CCER1Q8TC90 406 aaPredicted RBP9.51□□□□□ -0.89
ECHDC1-202ENST00000368289 KCTD12Q96CX2 325 aaKnown RBP9.51□□□□□ -0.89
ECHDC1-202ENST00000368289 SYT17Q9BSW7 474 aa9.51□□□□□ -0.89
ECHDC1-202ENST00000368289 GOPCQ9HD26 462 aa9.51□□□□□ -0.89
ECHDC1-202ENST00000368289 PLEKHG3A1L390 1219 aa9.5□□□□□ -0.89
ECHDC1-202ENST00000368289 KDM4AO75164 1064 aa9.5□□□□□ -0.89
ECHDC1-202ENST00000368289 THSD4Q6ZMP0 1018 aa9.5□□□□□ -0.89
ECHDC1-202ENST00000368289 DNAJC5GQ8N7S2 189 aa9.5□□□□□ -0.89
ECHDC1-202ENST00000368289 RREB1Q92766 1687 aa9.5□□□□□ -0.89
ECHDC1-202ENST00000368289 NRXN3Q9Y4C0 1643 aa9.49□□□□□ -0.89
ECHDC1-202ENST00000368289 CFHP08603 1231 aa9.49□□□□□ -0.89
ECHDC1-202ENST00000368289 HSPA6P17066 643 aa9.49□□□□□ -0.89
ECHDC1-202ENST00000368289 BCAMP50895 628 aa9.49□□□□□ -0.89
ECHDC1-202ENST00000368289 NYAP1Q6ZVC0 841 aa9.49□□□□□ -0.89
ECHDC1-202ENST00000368289 FHDC1Q9C0D6 1143 aaPredicted RBP9.49□□□□□ -0.89
ECHDC1-202ENST00000368289 MYOM1P52179 1685 aa9.48□□□□□ -0.89
ECHDC1-202ENST00000368289 APBA3O96018 575 aa9.48□□□□□ -0.89
ECHDC1-202ENST00000368289 SH3D19Q5HYK7 790 aa9.48□□□□□ -0.89
ECHDC1-202ENST00000368289 SPIRE2Q8WWL2 714 aa9.48□□□□□ -0.89
ECHDC1-202ENST00000368289 TBC1D2Q9BYX2 928 aa9.48□□□□□ -0.89
ECHDC1-202ENST00000368289 DUOX2Q9NRD8 1548 aa9.47□□□□□ -0.89
ECHDC1-202ENST00000368289 FAM83GA6ND36 823 aa9.47□□□□□ -0.89
ECHDC1-202ENST00000368289 SKIV2LQ15477 1246 aaKnown RBP9.47□□□□□ -0.89
ECHDC1-202ENST00000368289 CABLES1Q8TDN4 633 aa9.47□□□□□ -0.89
ECHDC1-202ENST00000368289 PCMTD1Q96MG8 357 aaPredicted RBP9.47□□□□□ -0.89
ECHDC1-202ENST00000368289 PARD3Q8TEW0 1356 aa9.47□□□□□ -0.89
ECHDC1-202ENST00000368289 CASZ1Q86V15 1759 aa9.46□□□□□ -0.9
ECHDC1-202ENST00000368289 FOXO3O43524 673 aa9.46□□□□□ -0.9
ECHDC1-202ENST00000368289 ZBTB7AO95365 584 aa9.46□□□□□ -0.9
ECHDC1-202ENST00000368289 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.46□□□□□ -0.9
ECHDC1-202ENST00000368289 CLSPNQ9HAW4 1339 aa9.46□□□□□ -0.9
ECHDC1-202ENST00000368289 ADGRL2O95490 1459 aa9.46□□□□□ -0.9
ECHDC1-202ENST00000368289 USP32Q8NFA0 1604 aa9.45□□□□□ -0.9
ECHDC1-202ENST00000368289 GCC2Q8IWJ2 1684 aa9.45□□□□□ -0.9
ECHDC1-202ENST00000368289 ACTN4O43707 911 aaKnown RBP9.45□□□□□ -0.9
ECHDC1-202ENST00000368289 GJA5P36382 358 aa9.45□□□□□ -0.9
ECHDC1-202ENST00000368289 ATP6V1AP38606 617 aa9.45□□□□□ -0.9
ECHDC1-202ENST00000368289 SPNS2Q8IVW8 549 aa9.45□□□□□ -0.9
ECHDC1-202ENST00000368289 CCDC9Q9Y3X0 531 aaKnown RBP9.45□□□□□ -0.9
ECHDC1-202ENST00000368289 MYSM1Q5VVJ2 828 aa9.44□□□□□ -0.9
ECHDC1-202ENST00000368289 RRP7BPQ9NSQ0 103 aa9.44□□□□□ -0.9
ECHDC1-202ENST00000368289 SPATA31A3Q5VYP0 1347 aa9.44□□□□□ -0.9
ECHDC1-202ENST00000368289 KIF15Q9NS87 1388 aa9.44□□□□□ -0.9
ECHDC1-202ENST00000368289 THSD7AQ9UPZ6 1657 aa9.43□□□□□ -0.9
ECHDC1-202ENST00000368289 ERBINQ96RT1 1412 aa9.43□□□□□ -0.9
ECHDC1-202ENST00000368289 ROBO2Q9HCK4 1378 aa9.43□□□□□ -0.9
ECHDC1-202ENST00000368289 NPHP3Q7Z494 1330 aa9.43□□□□□ -0.9
ECHDC1-202ENST00000368289 A0A0G2JS52 829 aa9.43□□□□□ -0.9
ECHDC1-202ENST00000368289 CLK2P49760 499 aaKnown RBP9.43□□□□□ -0.9
ECHDC1-202ENST00000368289 MYT1Q01538 1121 aa9.43□□□□□ -0.9
ECHDC1-202ENST00000368289 RIC3Q7Z5B4 369 aa9.43□□□□□ -0.9
ECHDC1-202ENST00000368289 RNF166Q96A37 237 aaPredicted RBP9.43□□□□□ -0.9
ECHDC1-202ENST00000368289 WBP1LQ9NX94 342 aa9.43□□□□□ -0.9
ECHDC1-202ENST00000368289 PLCH1Q4KWH8 1693 aa9.42□□□□□ -0.9
ECHDC1-202ENST00000368289 RPRD2Q5VT52 1461 aaKnown RBP9.42□□□□□ -0.9
ECHDC1-202ENST00000368289 HOXA2O43364 376 aa9.42□□□□□ -0.9
ECHDC1-202ENST00000368289 PTPN5P54829 565 aa9.42□□□□□ -0.9
ECHDC1-202ENST00000368289 FUT2Q10981 343 aa9.42□□□□□ -0.9
ECHDC1-202ENST00000368289 TUSC1Q2TAM9 212 aa9.42□□□□□ -0.9
ECHDC1-202ENST00000368289 NBPF8Q3BBV2 869 aa9.42□□□□□ -0.9
ECHDC1-202ENST00000368289 NBPF14Q5TI25 921 aa9.42□□□□□ -0.9
ECHDC1-202ENST00000368289 PTPN23Q9H3S7 1636 aa9.42□□□□□ -0.9
ECHDC1-202ENST00000368289 SPATA31A5Q5VU36 1347 aa9.41□□□□□ -0.9
ECHDC1-202ENST00000368289 SPATA31A7Q8IWB4 1347 aa9.41□□□□□ -0.9
ECHDC1-202ENST00000368289 SPTLC1O15269 473 aa9.41□□□□□ -0.9
ECHDC1-202ENST00000368289 POLR3EQ9NVU0 708 aa9.41□□□□□ -0.9
ECHDC1-202ENST00000368289 NRAPQ86VF7 1730 aa9.4□□□□□ -0.9
ECHDC1-202ENST00000368289 NWD2Q9ULI1 1742 aa9.4□□□□□ -0.9
ECHDC1-202ENST00000368289 MOXD2PA6NHM9 499 aa9.4□□□□□ -0.9
ECHDC1-202ENST00000368289 APLP1P51693 650 aa9.4□□□□□ -0.9
ECHDC1-202ENST00000368289 ESCO1Q5FWF5 840 aa9.4□□□□□ -0.9
ECHDC1-202ENST00000368289 RSBN1LQ6PCB5 846 aaPredicted RBP9.4□□□□□ -0.9
ECHDC1-202ENST00000368289 HCSTQ9UBK5 93 aa9.4□□□□□ -0.9
ECHDC1-202ENST00000368289 PCDHB3Q9Y5E6 796 aa9.4□□□□□ -0.9
ECHDC1-202ENST00000368289 ADGRB2O60241 1585 aa9.39□□□□□ -0.91
ECHDC1-202ENST00000368289 FDX1P10109 184 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms