RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 XRCC6P12956 609 aaKnown RBP eCLIP13.88□□□□□ -0.19
COPA-202ENST00000368069 CEBPAP49715 358 aaPredicted RBP13.88□□□□□ -0.19
COPA-202ENST00000368069 KLHL40Q2TBA0 621 aa13.88□□□□□ -0.19
COPA-202ENST00000368069 TBC1D2BQ9UPU7 963 aa13.88□□□□□ -0.19
COPA-202ENST00000368069 ATP7AQ04656 1500 aa13.87□□□□□ -0.19
COPA-202ENST00000368069 DHX16O60231 1041 aaKnown RBP13.87□□□□□ -0.19
COPA-202ENST00000368069 MARCH6O60337 910 aa13.87□□□□□ -0.19
COPA-202ENST00000368069 ZNF771Q7L3S4 317 aaPredicted RBP13.87□□□□□ -0.19
COPA-202ENST00000368069 EIF4A2Q14240 407 aaKnown RBP13.87□□□□□ -0.19
COPA-202ENST00000368069 LARP6Q9BRS8 491 aaKnown RBP13.87□□□□□ -0.19
COPA-202ENST00000368069 BOLA2Q9H3K6 86 aa13.87□□□□□ -0.19
COPA-202ENST00000368069 MAGI2Q86UL8 1455 aa13.87□□□□□ -0.19
COPA-202ENST00000368069 UQCRHLA0A096LP55 91 aa13.87□□□□□ -0.19
COPA-202ENST00000368069 SMC2O95347 1197 aa13.87□□□□□ -0.19
COPA-202ENST00000368069 UQCRHP07919 91 aa13.87□□□□□ -0.19
COPA-202ENST00000368069 ME1P48163 572 aa13.87□□□□□ -0.19
COPA-202ENST00000368069 KRT32Q14532 448 aa13.87□□□□□ -0.19
COPA-202ENST00000368069 OLFM4Q6UX06 510 aa13.87□□□□□ -0.19
COPA-202ENST00000368069 GDPD2Q9HCC8 539 aa13.87□□□□□ -0.19
COPA-202ENST00000368069 ABCC1P33527 1531 aa13.87□□□□□ -0.19
COPA-202ENST00000368069 KIF6Q6ZMV9 814 aa13.87□□□□□ -0.19
COPA-202ENST00000368069 PHF8Q9UPP1 1060 aa13.87□□□□□ -0.19
COPA-202ENST00000368069 CLSTN1O94985 981 aa13.86□□□□□ -0.19
COPA-202ENST00000368069 ZFYVE9O95405 1425 aa13.86□□□□□ -0.19
COPA-202ENST00000368069 PPP1R42Q7Z4L9 355 aa13.86□□□□□ -0.19
COPA-202ENST00000368069 PANK2Q9BZ23 570 aa13.86□□□□□ -0.19
COPA-202ENST00000368069 PTPRTO14522 1441 aa13.86□□□□□ -0.19
COPA-202ENST00000368069 KRT24Q2M2I5 525 aa13.86□□□□□ -0.19
COPA-202ENST00000368069 RBM27Q9P2N5 1060 aaKnown RBP13.86□□□□□ -0.19
COPA-202ENST00000368069 PDE1AP54750 535 aa13.86□□□□□ -0.19
COPA-202ENST00000368069 CCDC8Q9H0W5 538 aaPredicted RBP13.86□□□□□ -0.19
COPA-202ENST00000368069 LIMCH1Q9UPQ0 1083 aa13.86□□□□□ -0.19
COPA-202ENST00000368069 RIMS2Q9UQ26 1411 aa13.86□□□□□ -0.19
COPA-202ENST00000368069 FAM177BA6PVY3 158 aa13.85□□□□□ -0.19
COPA-202ENST00000368069 CCDC183Q5T5S1 534 aa13.85□□□□□ -0.19
COPA-202ENST00000368069 ANKRD20A12PQ8NF67 263 aa13.85□□□□□ -0.19
COPA-202ENST00000368069 DDX11Q96FC9 970 aa13.85□□□□□ -0.19
COPA-202ENST00000368069 STRN4Q9NRL3 753 aa13.85□□□□□ -0.19
COPA-202ENST00000368069 PIK3R4Q99570 1358 aa13.85□□□□□ -0.19
COPA-202ENST00000368069 FKBP4Q02790 459 aaKnown RBP eCLIP13.85□□□□□ -0.19
COPA-202ENST00000368069 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
COPA-202ENST00000368069 ATP2B1P20020 1258 aa13.85□□□□□ -0.19
COPA-202ENST00000368069 TMX4Q9H1E5 349 aaPredicted RBP13.85□□□□□ -0.19
COPA-202ENST00000368069 DCTPP1Q9H773 170 aa13.85□□□□□ -0.19
COPA-202ENST00000368069 DBF4Q9UBU7 674 aaPredicted RBP13.85□□□□□ -0.19
COPA-202ENST00000368069 AMOTQ4VCS5 1084 aa13.84□□□□□ -0.19
COPA-202ENST00000368069 LARP1Q6PKG0 1096 aaKnown RBP13.84□□□□□ -0.19
COPA-202ENST00000368069 MNS1Q8NEH6 495 aa13.84□□□□□ -0.19
COPA-202ENST00000368069 CNNM1Q9NRU3 951 aa13.84□□□□□ -0.19
COPA-202ENST00000368069 MAP3K11Q16584 847 aa13.84□□□□□ -0.19
COPA-202ENST00000368069 TOM1L2Q6ZVM7 507 aa13.84□□□□□ -0.19
COPA-202ENST00000368069 RBM33Q96EV2 1170 aaKnown RBP13.84□□□□□ -0.19
COPA-202ENST00000368069 TMX3Q96JJ7 454 aa13.84□□□□□ -0.19
COPA-202ENST00000368069 SH2B1Q9NRF2 756 aaPredicted RBP13.84□□□□□ -0.19
COPA-202ENST00000368069 YTHDC2Q9H6S0 1430 aaKnown RBP13.84□□□□□ -0.19
COPA-202ENST00000368069 NPATQ14207 1427 aa13.84□□□□□ -0.19
COPA-202ENST00000368069 CAMK4Q16566 473 aa13.84□□□□□ -0.19
COPA-202ENST00000368069 PI4KAP2A4QPH2 592 aa13.83□□□□□ -0.2
COPA-202ENST00000368069 G3V3G9 751 aa13.83□□□□□ -0.2
COPA-202ENST00000368069 DCAF8Q5TAQ9 597 aa13.83□□□□□ -0.2
COPA-202ENST00000368069 AMOTL1Q8IY63 956 aa13.83□□□□□ -0.2
COPA-202ENST00000368069 PDILTQ8N807 584 aa13.83□□□□□ -0.2
COPA-202ENST00000368069 PI4KAP1Q8N8J0 262 aa13.83□□□□□ -0.2
COPA-202ENST00000368069 MYD88Q99836 296 aa13.83□□□□□ -0.2
COPA-202ENST00000368069 CFAP45Q9UL16 551 aa13.83□□□□□ -0.2
COPA-202ENST00000368069 ZBTB7BO15156 539 aaPredicted RBP13.83□□□□□ -0.2
COPA-202ENST00000368069 CCDC57Q2TAC2 916 aa13.83□□□□□ -0.2
COPA-202ENST00000368069 CEP85Q6P2H3 762 aa13.83□□□□□ -0.2
COPA-202ENST00000368069 NOL10Q9BSC4 688 aaKnown RBP13.83□□□□□ -0.2
COPA-202ENST00000368069 ECHDC1Q9NTX5 307 aa13.83□□□□□ -0.2
COPA-202ENST00000368069 ANXA1P04083 346 aa13.83□□□□□ -0.2
COPA-202ENST00000368069 SART3Q15020 963 aaKnown RBP13.83□□□□□ -0.2
COPA-202ENST00000368069 RRP12Q5JTH9 1297 aaKnown RBP13.83□□□□□ -0.2
COPA-202ENST00000368069 CEP126Q9P2H0 1117 aa13.83□□□□□ -0.2
COPA-202ENST00000368069 A0A0U1RQG5 324 aaPredicted RBP13.82□□□□□ -0.2
COPA-202ENST00000368069 PDIA4P13667 645 aaKnown RBP13.82□□□□□ -0.2
COPA-202ENST00000368069 ZSCAN23Q3MJ62 389 aa13.82□□□□□ -0.2
COPA-202ENST00000368069 PLEKHM2Q8IWE5 1019 aa13.82□□□□□ -0.2
COPA-202ENST00000368069 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.82□□□□□ -0.25e-8■■■■□ 20.3
COPA-202ENST00000368069 ABCA8O94911 1581 aa13.82□□□□□ -0.2
COPA-202ENST00000368069 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.82□□□□□ -0.24e-9■■■■■ 40.6
COPA-202ENST00000368069 NOC3LQ8WTT2 800 aaKnown RBP13.82□□□□□ -0.2
COPA-202ENST00000368069 TNRQ92752 1358 aa13.82□□□□□ -0.2
COPA-202ENST00000368069 UHRF1BP1LA0JNW5 1464 aa13.82□□□□□ -0.2
COPA-202ENST00000368069 RAB3GAP1Q15042 981 aa13.82□□□□□ -0.2
COPA-202ENST00000368069 PCMTD1Q96MG8 357 aaPredicted RBP13.82□□□□□ -0.2
COPA-202ENST00000368069 ESYT1Q9BSJ8 1104 aa13.82□□□□□ -0.2
COPA-202ENST00000368069 SAMD9LQ8IVG5 1584 aa13.82□□□□□ -0.2
COPA-202ENST00000368069 MAP3K2Q9Y2U5 619 aa13.82□□□□□ -0.2
COPA-202ENST00000368069 NCKAP5LQ9HCH0 1330 aa13.81□□□□□ -0.2
COPA-202ENST00000368069 RHPN1Q8TCX5 695 aa13.81□□□□□ -0.2
COPA-202ENST00000368069 KDM5AP29375 1690 aaKnown RBP13.81□□□□□ -0.2
COPA-202ENST00000368069 FOXO3O43524 673 aa13.81□□□□□ -0.2
COPA-202ENST00000368069 VPS53Q5VIR6 699 aa13.81□□□□□ -0.2
COPA-202ENST00000368069 IPO7O95373 1038 aaKnown RBP13.81□□□□□ -0.2
COPA-202ENST00000368069 MTHFSDQ2M296 383 aaKnown RBP13.81□□□□□ -0.2
COPA-202ENST00000368069 CCDC85AQ96PX6 553 aaPredicted RBP13.81□□□□□ -0.2
COPA-202ENST00000368069 HYPKQ9NX55 129 aa13.81□□□□□ -0.2
COPA-202ENST00000368069 USP25Q9UHP3 1055 aa13.81□□□□□ -0.2
COPA-202ENST00000368069 STX6O43752 255 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms