RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 CIZ1Q9ULV3 898 aaPredicted RBP16.19■□□□□ 0.18
TMEM248-201ENST00000341567 BICDL1Q6ZP65 573 aa16.19■□□□□ 0.18
TMEM248-201ENST00000341567 MBD3O95983 291 aa16.18■□□□□ 0.18
TMEM248-201ENST00000341567 MRPL50Q8N5N7 158 aaKnown RBP16.18■□□□□ 0.18
TMEM248-201ENST00000341567 GCC2Q8IWJ2 1684 aa16.18■□□□□ 0.18
TMEM248-201ENST00000341567 UBE2Q2Q8WVN8 375 aa16.18■□□□□ 0.18
TMEM248-201ENST00000341567 TSPY26PQ9H489 355 aa16.18■□□□□ 0.18
TMEM248-201ENST00000341567 CNNM1Q9NRU3 951 aa16.18■□□□□ 0.18
TMEM248-201ENST00000341567 ATP2B1P20020 1258 aa16.18■□□□□ 0.18
TMEM248-201ENST00000341567 PPP1R42Q7Z4L9 355 aa16.18■□□□□ 0.18
TMEM248-201ENST00000341567 PTPRTO14522 1441 aa16.18■□□□□ 0.18
TMEM248-201ENST00000341567 RASSF8Q8NHQ8 419 aa16.18■□□□□ 0.18
TMEM248-201ENST00000341567 PRDM10Q9NQV6 1147 aa16.18■□□□□ 0.18
TMEM248-201ENST00000341567 MAP3K2Q9Y2U5 619 aa16.18■□□□□ 0.18
TMEM248-201ENST00000341567 MEX3CQ5U5Q3 659 aaKnown RBP16.17■□□□□ 0.18
TMEM248-201ENST00000341567 GPTP24298 496 aa16.17■□□□□ 0.18
TMEM248-201ENST00000341567 NFXL1Q6ZNB6 911 aa16.17■□□□□ 0.18
TMEM248-201ENST00000341567 CCAR2Q8N163 923 aaKnown RBP16.17■□□□□ 0.18
TMEM248-201ENST00000341567 ATP10AO60312 1499 aa16.17■□□□□ 0.18
TMEM248-201ENST00000341567 ADGBQ8N7X0 1667 aa16.16■□□□□ 0.18
TMEM248-201ENST00000341567 TRDNQ13061 729 aa16.16■□□□□ 0.18
TMEM248-201ENST00000341567 RRP12Q5JTH9 1297 aaKnown RBP16.16■□□□□ 0.18
TMEM248-201ENST00000341567 ZMYND15Q9H091 742 aa16.16■□□□□ 0.18
TMEM248-201ENST00000341567 PIK3C2GO75747 1445 aa16.16■□□□□ 0.18
TMEM248-201ENST00000341567 DTNBO60941 627 aa16.16■□□□□ 0.18
TMEM248-201ENST00000341567 FERMT3Q86UX7 667 aa16.16■□□□□ 0.18
TMEM248-201ENST00000341567 PHAXQ9H814 394 aaKnown RBP16.16■□□□□ 0.18
TMEM248-201ENST00000341567 ARAP3Q8WWN8 1544 aa16.16■□□□□ 0.18
TMEM248-201ENST00000341567 TNNT3P45378 269 aaPredicted RBP16.16■□□□□ 0.18
TMEM248-201ENST00000341567 GDPD2Q9HCC8 539 aa16.16■□□□□ 0.18
TMEM248-201ENST00000341567 MAST1Q9Y2H9 1570 aa16.16■□□□□ 0.18
TMEM248-201ENST00000341567 JAKMIP1Q96N16 626 aaKnown RBP16.15■□□□□ 0.18
TMEM248-201ENST00000341567 RALYLQ86SE5 291 aaKnown RBP16.15■□□□□ 0.18
TMEM248-201ENST00000341567 OTUD7AQ8TE49 926 aaPredicted RBP16.15■□□□□ 0.18
TMEM248-201ENST00000341567 UBE3BQ7Z3V4 1068 aa16.15■□□□□ 0.18
TMEM248-201ENST00000341567 KIF6Q6ZMV9 814 aa16.14■□□□□ 0.17
TMEM248-201ENST00000341567 RBM27Q9P2N5 1060 aaKnown RBP16.14■□□□□ 0.17
TMEM248-201ENST00000341567 ABCA9Q8IUA7 1624 aa16.14■□□□□ 0.17
TMEM248-201ENST00000341567 A0A087WZG4 1122 aa16.14■□□□□ 0.17
TMEM248-201ENST00000341567 IL13P35225 146 aa16.14■□□□□ 0.17
TMEM248-201ENST00000341567 DBF4Q9UBU7 674 aaPredicted RBP16.14■□□□□ 0.17
TMEM248-201ENST00000341567 CCDC57Q2TAC2 916 aa16.14■□□□□ 0.17
TMEM248-201ENST00000341567 PA2G4Q9UQ80 394 aaKnown RBP16.14■□□□□ 0.17
TMEM248-201ENST00000341567 MAP7D2Q96T17 732 aa16.13■□□□□ 0.17
TMEM248-201ENST00000341567 ZBTB40Q9NUA8 1239 aa16.13■□□□□ 0.17
TMEM248-201ENST00000341567 GCP02774 474 aa16.13■□□□□ 0.17
TMEM248-201ENST00000341567 KIF1BPQ96EK5 621 aa16.13■□□□□ 0.17
TMEM248-201ENST00000341567 KIF3AQ9Y496 699 aa16.13■□□□□ 0.17
TMEM248-201ENST00000341567 ABCC1P33527 1531 aa16.13■□□□□ 0.17
TMEM248-201ENST00000341567 TRIM5Q9C035 493 aa16.13■□□□□ 0.17
TMEM248-201ENST00000341567 IL16Q14005 1332 aa16.13■□□□□ 0.17
TMEM248-201ENST00000341567 CWF19L2Q2TBE0 894 aaKnown RBP16.12■□□□□ 0.17
TMEM248-201ENST00000341567 PRPF40BQ6NWY9 871 aaKnown RBP16.12■□□□□ 0.17
TMEM248-201ENST00000341567 NFATC2IPQ8NCF5 419 aa16.12■□□□□ 0.17
TMEM248-201ENST00000341567 SDSP20132 328 aa16.12■□□□□ 0.17
TMEM248-201ENST00000341567 CLCN1P35523 988 aa16.12■□□□□ 0.17
TMEM248-201ENST00000341567 SNRKQ9NRH2 765 aa16.12■□□□□ 0.17
TMEM248-201ENST00000341567 TCEANC2Q96MN5 208 aa16.12■□□□□ 0.17
TMEM248-201ENST00000341567 NUCB1Q02818 461 aa16.11■□□□□ 0.17
TMEM248-201ENST00000341567 DDX11Q96FC9 970 aa16.11■□□□□ 0.17
TMEM248-201ENST00000341567 LGR6Q9HBX8 967 aa16.11■□□□□ 0.17
TMEM248-201ENST00000341567 BAG4O95429 457 aaKnown RBP16.11■□□□□ 0.17
TMEM248-201ENST00000341567 CASTP20810 708 aaKnown RBP16.11■□□□□ 0.17
TMEM248-201ENST00000341567 CWC22Q9HCG8 908 aaKnown RBP16.11■□□□□ 0.17
TMEM248-201ENST00000341567 AMOTQ4VCS5 1084 aa16.11■□□□□ 0.17
TMEM248-201ENST00000341567 SAMD1Q6SPF0 538 aaPredicted RBP16.11■□□□□ 0.17
TMEM248-201ENST00000341567 TMX4Q9H1E5 349 aaPredicted RBP16.11■□□□□ 0.17
TMEM248-201ENST00000341567 CEP126Q9P2H0 1117 aa16.11■□□□□ 0.17
TMEM248-201ENST00000341567 SASS6Q6UVJ0 657 aa16.11■□□□□ 0.17
TMEM248-201ENST00000341567 SYNE3Q6ZMZ3 975 aa16.11■□□□□ 0.17
TMEM248-201ENST00000341567 ERC1Q8IUD2 1116 aa16.11■□□□□ 0.17
TMEM248-201ENST00000341567 COPS6Q7L5N1 327 aa16.1■□□□□ 0.17
TMEM248-201ENST00000341567 KDM2BQ8NHM5 1336 aa16.1■□□□□ 0.17
TMEM248-201ENST00000341567 CROCC2H7BZ55 1655 aa16.1■□□□□ 0.17
TMEM248-201ENST00000341567 AKAP17AQ02040 695 aaKnown RBP16.1■□□□□ 0.17
TMEM248-201ENST00000341567 CYP46A1Q9Y6A2 500 aa16.1■□□□□ 0.17
TMEM248-201ENST00000341567 TPM4P67936 248 aa16.1■□□□□ 0.17
TMEM248-201ENST00000341567 HDAC1Q13547 482 aaPredicted RBP16.09■□□□□ 0.17
TMEM248-201ENST00000341567 BMP2KLQ5H9B9 411 aa16.09■□□□□ 0.17
TMEM248-201ENST00000341567 TTC39AQ5SRH9 613 aa16.09■□□□□ 0.17
TMEM248-201ENST00000341567 LARP1Q6PKG0 1096 aaKnown RBP16.09■□□□□ 0.17
TMEM248-201ENST00000341567 HOMER1Q86YM7 354 aa16.09■□□□□ 0.17
TMEM248-201ENST00000341567 HOXC9P31274 260 aa16.09■□□□□ 0.17
TMEM248-201ENST00000341567 CPLX2Q6PUV4 134 aaKnown RBP16.09■□□□□ 0.17
TMEM248-201ENST00000341567 PES1O00541 588 aaKnown RBP16.09■□□□□ 0.17
TMEM248-201ENST00000341567 IDH1O75874 414 aaKnown RBP16.09■□□□□ 0.17
TMEM248-201ENST00000341567 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
TMEM248-201ENST00000341567 XAGE3Q8WTP9 111 aa16.08■□□□□ 0.17
TMEM248-201ENST00000341567 FMNL2Q96PY5 1086 aa16.08■□□□□ 0.17
TMEM248-201ENST00000341567 TMOD3Q9NYL9 352 aa16.08■□□□□ 0.17
TMEM248-201ENST00000341567 METP08581 1390 aa16.08■□□□□ 0.17
TMEM248-201ENST00000341567 CCDC83Q8IWF9 413 aa16.08■□□□□ 0.16
TMEM248-201ENST00000341567 PTPRCP08575 1304 aa16.08■□□□□ 0.16
TMEM248-201ENST00000341567 DHX16O60231 1041 aaKnown RBP16.08■□□□□ 0.16
TMEM248-201ENST00000341567 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.08■□□□□ 0.16
TMEM248-201ENST00000341567 ZBTB7BO15156 539 aaPredicted RBP16.07■□□□□ 0.16
TMEM248-201ENST00000341567 CCDC158Q5M9N0 1113 aa16.07■□□□□ 0.16
TMEM248-201ENST00000341567 EIF2AK4Q9P2K8 1649 aaKnown RBP16.07■□□□□ 0.16
TMEM248-201ENST00000341567 MPHOSPH8Q99549 860 aa16.07■□□□□ 0.16
TMEM248-201ENST00000341567 CFAP74Q9C0B2 1584 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms