RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 FCHSD2O94868 740 aa11.33□□□□□ -0.6
NECAP1-201ENST00000339754 THUMPD2Q9BTF0 503 aaKnown RBP11.33□□□□□ -0.6
NECAP1-201ENST00000339754 ATP10DQ9P241 1426 aa11.33□□□□□ -0.6
NECAP1-201ENST00000339754 PNPLA6Q8IY17 1366 aa11.33□□□□□ -0.6
NECAP1-201ENST00000339754 VGLL3A8MV65 326 aa11.33□□□□□ -0.6
NECAP1-201ENST00000339754 ZNF853P0CG23 659 aa11.33□□□□□ -0.6
NECAP1-201ENST00000339754 PALD1Q9ULE6 856 aa11.33□□□□□ -0.6
NECAP1-201ENST00000339754 RPAP1Q9BWH6 1393 aaPredicted RBP11.33□□□□□ -0.6
NECAP1-201ENST00000339754 EVC2Q86UK5 1308 aa11.33□□□□□ -0.6
NECAP1-201ENST00000339754 WDR33Q9C0J8 1336 aaKnown RBP11.33□□□□□ -0.6
NECAP1-201ENST00000339754 IRX5P78411 483 aaPredicted RBP11.32□□□□□ -0.6
NECAP1-201ENST00000339754 TULP4Q9NRJ4 1543 aa11.32□□□□□ -0.6
NECAP1-201ENST00000339754 CEP85Q6P2H3 762 aa11.32□□□□□ -0.6
NECAP1-201ENST00000339754 RPAP2Q8IXW5 612 aaPredicted RBP11.32□□□□□ -0.6
NECAP1-201ENST00000339754 SRCIN1Q9C0H9 1055 aa11.32□□□□□ -0.6
NECAP1-201ENST00000339754 CABP2Q9NPB3 220 aa11.32□□□□□ -0.6
NECAP1-201ENST00000339754 FYB1O15117 783 aa11.31□□□□□ -0.6
NECAP1-201ENST00000339754 IDI1Q13907 227 aa11.31□□□□□ -0.6
NECAP1-201ENST00000339754 TERF2Q15554 542 aa11.31□□□□□ -0.6
NECAP1-201ENST00000339754 NOL8Q76FK4 1167 aaKnown RBP11.31□□□□□ -0.6
NECAP1-201ENST00000339754 KLHL34Q8N239 644 aa11.31□□□□□ -0.6
NECAP1-201ENST00000339754 C8orf58Q8NAV2 365 aa11.31□□□□□ -0.6
NECAP1-201ENST00000339754 OSBPL3Q9H4L5 887 aa11.31□□□□□ -0.6
NECAP1-201ENST00000339754 MBIPQ9NS73 344 aa11.31□□□□□ -0.6
NECAP1-201ENST00000339754 CNPY2Q9Y2B0 182 aa11.31□□□□□ -0.6
NECAP1-201ENST00000339754 PRKAR2BP31323 418 aa11.31□□□□□ -0.6
NECAP1-201ENST00000339754 PLCB2Q00722 1185 aa11.31□□□□□ -0.6
NECAP1-201ENST00000339754 NAA30Q147X3 362 aaPredicted RBP11.31□□□□□ -0.6
NECAP1-201ENST00000339754 TWISTNBQ3B726 338 aaPredicted RBP11.31□□□□□ -0.6
NECAP1-201ENST00000339754 SPC24Q8NBT2 197 aa11.31□□□□□ -0.6
NECAP1-201ENST00000339754 IL17RAQ96F46 866 aa11.31□□□□□ -0.6
NECAP1-201ENST00000339754 PHACTR3Q96KR7 559 aa11.31□□□□□ -0.6
NECAP1-201ENST00000339754 IFT57Q9NWB7 429 aa11.31□□□□□ -0.6
NECAP1-201ENST00000339754 A0A1W2PP64 1363 aa11.31□□□□□ -0.6
NECAP1-201ENST00000339754 APBB1O00213 710 aa11.3□□□□□ -0.6
NECAP1-201ENST00000339754 UBE2HP62256 183 aa11.3□□□□□ -0.6
NECAP1-201ENST00000339754 GNAI1P63096 354 aa11.3□□□□□ -0.6
NECAP1-201ENST00000339754 GIMAP6Q6P9H5 292 aa11.3□□□□□ -0.6
NECAP1-201ENST00000339754 FAM135BQ49AJ0 1406 aa11.3□□□□□ -0.6
NECAP1-201ENST00000339754 SMTNL1A8MU46 457 aa11.3□□□□□ -0.6
NECAP1-201ENST00000339754 KCNJ4P48050 445 aa11.3□□□□□ -0.6
NECAP1-201ENST00000339754 ANAPC15P60006 121 aa11.3□□□□□ -0.6
NECAP1-201ENST00000339754 FBXO31Q5XUX0 539 aaPredicted RBP11.3□□□□□ -0.6
NECAP1-201ENST00000339754 KIF18AQ8NI77 898 aa11.3□□□□□ -0.6
NECAP1-201ENST00000339754 ESYT1Q9BSJ8 1104 aa11.3□□□□□ -0.6
NECAP1-201ENST00000339754 LRRC7Q96NW7 1537 aa11.3□□□□□ -0.6
NECAP1-201ENST00000339754 MLECQ14165 292 aa11.29□□□□□ -0.6
NECAP1-201ENST00000339754 NFE2L2Q16236 605 aa11.29□□□□□ -0.6
NECAP1-201ENST00000339754 PPLO60437 1756 aa11.29□□□□□ -0.6
NECAP1-201ENST00000339754 RPGRIP1LQ68CZ1 1315 aa11.29□□□□□ -0.6
NECAP1-201ENST00000339754 PDE1AP54750 535 aa11.29□□□□□ -0.6
NECAP1-201ENST00000339754 FAM53CQ9NYF3 392 aa11.29□□□□□ -0.6
NECAP1-201ENST00000339754 RGS12O14924 1447 aa11.29□□□□□ -0.6
NECAP1-201ENST00000339754 GOLGA6L6A8MZA4 724 aa11.28□□□□□ -0.6
NECAP1-201ENST00000339754 PTGS1P23219 599 aa11.28□□□□□ -0.6
NECAP1-201ENST00000339754 RNF39Q9H2S5 420 aa11.28□□□□□ -0.6
NECAP1-201ENST00000339754 ARHGEF40Q8TER5 1519 aa11.28□□□□□ -0.6
NECAP1-201ENST00000339754 CDC42BPGQ6DT37 1551 aa11.28□□□□□ -0.6
NECAP1-201ENST00000339754 PIK3C2BO00750 1634 aa11.28□□□□□ -0.6
NECAP1-201ENST00000339754 ZSCAN22P10073 491 aaPredicted RBP11.27□□□□□ -0.6
NECAP1-201ENST00000339754 TPRNQ4KMQ1 711 aa11.27□□□□□ -0.6
NECAP1-201ENST00000339754 UPF3BQ9BZI7 483 aaKnown RBP11.27□□□□□ -0.6
NECAP1-201ENST00000339754 CCDC66A2RUB6 948 aa11.27□□□□□ -0.61
NECAP1-201ENST00000339754 MCCP23508 829 aa11.27□□□□□ -0.61
NECAP1-201ENST00000339754 SLC20A2Q08357 652 aa11.27□□□□□ -0.61
NECAP1-201ENST00000339754 SLC52A1Q9NWF4 448 aa11.27□□□□□ -0.61
NECAP1-201ENST00000339754 ANKRD26Q9UPS8 1709 aa11.26□□□□□ -0.61
NECAP1-201ENST00000339754 VGFO15240 615 aaPredicted RBP11.26□□□□□ -0.61
NECAP1-201ENST00000339754 KRT24Q2M2I5 525 aa11.26□□□□□ -0.61
NECAP1-201ENST00000339754 C16orf45Q96MC5 204 aaPredicted RBP11.26□□□□□ -0.61
NECAP1-201ENST00000339754 PAXBP1Q9Y5B6 917 aa11.26□□□□□ -0.61
NECAP1-201ENST00000339754 KIF13AQ9H1H9 1805 aa11.26□□□□□ -0.61
NECAP1-201ENST00000339754 TULP2O00295 520 aa11.26□□□□□ -0.61
NECAP1-201ENST00000339754 PDIA4P13667 645 aaKnown RBP11.26□□□□□ -0.61
NECAP1-201ENST00000339754 TNNT1P13805 278 aa11.26□□□□□ -0.61
NECAP1-201ENST00000339754 LRMPQ12912 555 aa11.26□□□□□ -0.61
NECAP1-201ENST00000339754 TIGD1Q96MW7 591 aa11.26□□□□□ -0.61
NECAP1-201ENST00000339754 CHMLP26374 656 aa11.25□□□□□ -0.61
NECAP1-201ENST00000339754 CCDC186Q7Z3E2 898 aa11.25□□□□□ -0.61
NECAP1-201ENST00000339754 KRT222Q8N1A0 295 aa11.25□□□□□ -0.61
NECAP1-201ENST00000339754 SALL3Q9BXA9 1300 aa11.25□□□□□ -0.61
NECAP1-201ENST00000339754 PREX1Q8TCU6 1659 aa11.25□□□□□ -0.61
NECAP1-201ENST00000339754 CDK11BP21127 795 aaKnown RBP11.25□□□□□ -0.61
NECAP1-201ENST00000339754 ANO2Q9NQ90 1003 aa11.25□□□□□ -0.61
NECAP1-201ENST00000339754 NEXMIFQ5QGS0 1516 aa11.25□□□□□ -0.61
NECAP1-201ENST00000339754 ARHGEF28Q8N1W1 1705 aaKnown RBP11.25□□□□□ -0.61
NECAP1-201ENST00000339754 HMOX1P09601 288 aa11.24□□□□□ -0.61
NECAP1-201ENST00000339754 SYT1P21579 422 aa11.24□□□□□ -0.61
NECAP1-201ENST00000339754 KMT5BQ4FZB7 885 aa11.24□□□□□ -0.61
NECAP1-201ENST00000339754 CCDC112Q8NEF3 446 aa11.24□□□□□ -0.61
NECAP1-201ENST00000339754 MEIS3Q99687 375 aa11.24□□□□□ -0.61
NECAP1-201ENST00000339754 NRBP1Q9UHY1 535 aa11.24□□□□□ -0.61
NECAP1-201ENST00000339754 TUBGCP6Q96RT7 1819 aa11.24□□□□□ -0.61
NECAP1-201ENST00000339754 FIBPO43427 364 aa11.24□□□□□ -0.61
NECAP1-201ENST00000339754 STX6O43752 255 aa11.24□□□□□ -0.61
NECAP1-201ENST00000339754 F13A1P00488 732 aa11.24□□□□□ -0.61
NECAP1-201ENST00000339754 CCDC192P0DO97 292 aa11.24□□□□□ -0.61
NECAP1-201ENST00000339754 CAPN2P17655 700 aa11.24□□□□□ -0.61
NECAP1-201ENST00000339754 TSHZ3Q63HK5 1081 aa11.24□□□□□ -0.61
NECAP1-201ENST00000339754 PLCD3Q8N3E9 789 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms