RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 DCTN1Q14203 1278 aa16.66■□□□□ 0.26
PRIM1-201ENST00000338193 AMOTQ4VCS5 1084 aa16.66■□□□□ 0.26
PRIM1-201ENST00000338193 RUNDC1Q96C34 613 aa16.66■□□□□ 0.26
PRIM1-201ENST00000338193 ACSBG1Q96GR2 724 aa16.66■□□□□ 0.26
PRIM1-201ENST00000338193 LGR6Q9HBX8 967 aa16.66■□□□□ 0.26
PRIM1-201ENST00000338193 PLEKHG2Q9H7P9 1386 aa16.66■□□□□ 0.26
PRIM1-201ENST00000338193 APAF1O14727 1248 aa16.65■□□□□ 0.26
PRIM1-201ENST00000338193 KCNQ2O43526 872 aa16.65■□□□□ 0.26
PRIM1-201ENST00000338193 MPRIPQ6WCQ1 1025 aa16.65■□□□□ 0.26
PRIM1-201ENST00000338193 NHSQ6T4R5 1651 aa16.65■□□□□ 0.26
PRIM1-201ENST00000338193 TMPOP42166 694 aaKnown RBP16.64■□□□□ 0.26
PRIM1-201ENST00000338193 NFE2L2Q16236 605 aa16.64■□□□□ 0.26
PRIM1-201ENST00000338193 IFNL2Q8IZJ0 200 aa16.64■□□□□ 0.26
PRIM1-201ENST00000338193 MAPK8IP3Q9UPT6 1336 aa16.64■□□□□ 0.25
PRIM1-201ENST00000338193 TNS1Q9HBL0 1735 aaKnown RBP16.64■□□□□ 0.25
PRIM1-201ENST00000338193 MAP3K5Q99683 1374 aa16.64■□□□□ 0.25
PRIM1-201ENST00000338193 NKX1-1Q15270 411 aaPredicted RBP16.64■□□□□ 0.25
PRIM1-201ENST00000338193 NEUROD2Q15784 382 aa16.64■□□□□ 0.25
PRIM1-201ENST00000338193 THUMPD2Q9BTF0 503 aaKnown RBP16.64■□□□□ 0.25
PRIM1-201ENST00000338193 AKAP4Q5JQC9 854 aa16.63■□□□□ 0.25
PRIM1-201ENST00000338193 MCM10Q7L590 875 aa16.63■□□□□ 0.25
PRIM1-201ENST00000338193 IL17REQ8NFR9 667 aa16.63■□□□□ 0.25
PRIM1-201ENST00000338193 GAS2L2Q8NHY3 880 aa16.63■□□□□ 0.25
PRIM1-201ENST00000338193 SIPA1L3O60292 1781 aaPredicted RBP16.63■□□□□ 0.25
PRIM1-201ENST00000338193 RNMTO43148 476 aaKnown RBP16.62■□□□□ 0.25
PRIM1-201ENST00000338193 C1orf141Q5JVX7 400 aa16.62■□□□□ 0.25
PRIM1-201ENST00000338193 TRIM35Q9UPQ4 493 aa16.62■□□□□ 0.25
PRIM1-201ENST00000338193 BTAF1O14981 1849 aa16.62■□□□□ 0.25
PRIM1-201ENST00000338193 BCL9O00512 1426 aa16.61■□□□□ 0.25
PRIM1-201ENST00000338193 GNAT3A8MTJ3 354 aa16.61■□□□□ 0.25
PRIM1-201ENST00000338193 SALL2Q9Y467 1007 aaPredicted RBP16.61■□□□□ 0.25
PRIM1-201ENST00000338193 MRC1P22897 1456 aa16.6■□□□□ 0.25
PRIM1-201ENST00000338193 TRIM37O94972 964 aa16.6■□□□□ 0.25
PRIM1-201ENST00000338193 PRIM1P49642 420 aaKnown RBP16.6■□□□□ 0.25
PRIM1-201ENST00000338193 RIPK4P57078 832 aa16.6■□□□□ 0.25
PRIM1-201ENST00000338193 FAM196AQ6ZSG2 479 aa16.59■□□□□ 0.25
PRIM1-201ENST00000338193 PNNQ9H307 717 aaKnown RBP16.59■□□□□ 0.25
PRIM1-201ENST00000338193 CEMIPQ8WUJ3 1361 aa16.59■□□□□ 0.25
PRIM1-201ENST00000338193 KAT6BQ8WYB5 2073 aa16.59■□□□□ 0.25
PRIM1-201ENST00000338193 DCAF5Q96JK2 942 aa16.58■□□□□ 0.24
PRIM1-201ENST00000338193 PAPPAQ13219 1627 aa16.57■□□□□ 0.24
PRIM1-201ENST00000338193 SYTL4Q96C24 671 aaPredicted RBP16.57■□□□□ 0.24
PRIM1-201ENST00000338193 NEFMP07197 916 aa16.56■□□□□ 0.24
PRIM1-201ENST00000338193 PIGBQ92521 554 aa16.56■□□□□ 0.24
PRIM1-201ENST00000338193 PRR29P0C7W0 189 aa16.55■□□□□ 0.24
PRIM1-201ENST00000338193 NFATC2IPQ8NCF5 419 aa16.55■□□□□ 0.24
PRIM1-201ENST00000338193 SLC52A2Q9HAB3 445 aa16.54■□□□□ 0.24
PRIM1-201ENST00000338193 KCNQ3O43525 872 aa16.53■□□□□ 0.24
PRIM1-201ENST00000338193 HSP90AB1P08238 724 aaKnown RBP16.53■□□□□ 0.24
PRIM1-201ENST00000338193 UPF1Q92900 1129 aaKnown RBP eCLIP16.53■□□□□ 0.24
PRIM1-201ENST00000338193 MIS18AQ9NYP9 233 aa16.53■□□□□ 0.24
PRIM1-201ENST00000338193 ASAP1Q9ULH1 1129 aa16.53■□□□□ 0.24
PRIM1-201ENST00000338193 KDM3BQ7LBC6 1761 aa16.53■□□□□ 0.24
PRIM1-201ENST00000338193 ERVV-2B6SEH9 535 aa16.52■□□□□ 0.24
PRIM1-201ENST00000338193 CABP4P57796 275 aa16.52■□□□□ 0.24
PRIM1-201ENST00000338193 SLC39A6Q13433 755 aa16.52■□□□□ 0.24
PRIM1-201ENST00000338193 BCL11BQ9C0K0 894 aaPredicted RBP16.52■□□□□ 0.24
PRIM1-201ENST00000338193 HTATSF1O43719 755 aaKnown RBP16.51■□□□□ 0.23
PRIM1-201ENST00000338193 DEFB132Q7Z7B7 95 aa16.51■□□□□ 0.23
PRIM1-201ENST00000338193 WWC1Q8IX03 1113 aa16.51■□□□□ 0.23
PRIM1-201ENST00000338193 RTF1Q92541 710 aaKnown RBP16.51■□□□□ 0.23
PRIM1-201ENST00000338193 ATG3Q9NT62 314 aa16.51■□□□□ 0.23
PRIM1-201ENST00000338193 TMOD3Q9NYL9 352 aa16.51■□□□□ 0.23
PRIM1-201ENST00000338193 UBR2Q8IWV8 1755 aa16.51■□□□□ 0.23
PRIM1-201ENST00000338193 LY75O60449 1722 aa16.51■□□□□ 0.23
PRIM1-201ENST00000338193 KCNQ4P56696 695 aa16.51■□□□□ 0.23
PRIM1-201ENST00000338193 KCPQ6ZWJ8 1503 aa16.51■□□□□ 0.23
PRIM1-201ENST00000338193 ZNF521Q96K83 1311 aa16.5■□□□□ 0.23
PRIM1-201ENST00000338193 POTEIP0CG38 1075 aa16.5■□□□□ 0.23
PRIM1-201ENST00000338193 APBA3O96018 575 aa16.49■□□□□ 0.23
PRIM1-201ENST00000338193 TEFQ10587 303 aa16.49■□□□□ 0.23
PRIM1-201ENST00000338193 SLC4A9Q96Q91 983 aa16.49■□□□□ 0.23
PRIM1-201ENST00000338193 HNRNPUQ00839 825 aaKnown RBP eCLIP16.48■□□□□ 0.23
PRIM1-201ENST00000338193 CCDC27Q2M243 656 aa16.48■□□□□ 0.23
PRIM1-201ENST00000338193 PROM2Q8N271 834 aa16.48■□□□□ 0.23
PRIM1-201ENST00000338193 C5P01031 1676 aa16.47■□□□□ 0.23
PRIM1-201ENST00000338193 TJP1Q07157 1748 aa16.47■□□□□ 0.23
PRIM1-201ENST00000338193 EN1Q05925 392 aaPredicted RBP16.47■□□□□ 0.23
PRIM1-201ENST00000338193 LMOD3Q0VAK6 560 aa16.47■□□□□ 0.23
PRIM1-201ENST00000338193 RREB1Q92766 1687 aa16.47■□□□□ 0.23
PRIM1-201ENST00000338193 PALLDQ8WX93 1383 aa16.47■□□□□ 0.23
PRIM1-201ENST00000338193 TAF7Q15545 349 aaPredicted RBP16.46■□□□□ 0.23
PRIM1-201ENST00000338193 LAS1LQ9Y4W2 734 aaKnown RBP16.46■□□□□ 0.23
PRIM1-201ENST00000338193 RGPD3A6NKT7 1758 aaPredicted RBP16.46■□□□□ 0.23
PRIM1-201ENST00000338193 RGPD4Q7Z3J3 1758 aa16.46■□□□□ 0.23
PRIM1-201ENST00000338193 BTBD11A6QL63 1104 aa16.45■□□□□ 0.22
PRIM1-201ENST00000338193 ZNF853P0CG23 659 aa16.45■□□□□ 0.22
PRIM1-201ENST00000338193 EZH2Q15910 746 aaKnown RBP16.45■□□□□ 0.22
PRIM1-201ENST00000338193 KRT24Q2M2I5 525 aa16.45■□□□□ 0.22
PRIM1-201ENST00000338193 CDCA7LQ96GN5 454 aa16.45■□□□□ 0.22
PRIM1-201ENST00000338193 LRRC4BQ9NT99 713 aa16.45■□□□□ 0.22
PRIM1-201ENST00000338193 NUP188Q5SRE5 1749 aa16.45■□□□□ 0.22
PRIM1-201ENST00000338193 PRAMEF22A3QJZ6 481 aa16.44■□□□□ 0.22
PRIM1-201ENST00000338193 PTCD1O75127 700 aaKnown RBP16.44■□□□□ 0.22
PRIM1-201ENST00000338193 CD44P16070 742 aaKnown RBP16.44■□□□□ 0.22
PRIM1-201ENST00000338193 TSR2Q969E8 191 aaKnown RBP16.44■□□□□ 0.22
PRIM1-201ENST00000338193 CAMKK2Q96RR4 588 aa16.44■□□□□ 0.22
PRIM1-201ENST00000338193 TAF1LQ8IZX4 1826 aa16.44■□□□□ 0.22
PRIM1-201ENST00000338193 CHL1O00533 1208 aa16.43■□□□□ 0.22
PRIM1-201ENST00000338193 ITPK1Q13572 414 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms