RNA–Protein interactions for RNA: ENST00000332981.9

PRKCH-201, Transcript of protein kinase C eta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCH, Length 3,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-201ENST00000332981 MPRIPQ6WCQ1 1025 aa16.21■□□□□ 0.19
PRKCH-201ENST00000332981 BICD2Q8TD16 824 aa16.21■□□□□ 0.19
PRKCH-201ENST00000332981 ABCC4O15439 1325 aa16.21■□□□□ 0.19
PRKCH-201ENST00000332981 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.21■□□□□ 0.18
PRKCH-201ENST00000332981 NSD2O96028 1365 aa16.2■□□□□ 0.18
PRKCH-201ENST00000332981 YTHDC2Q9H6S0 1430 aaKnown RBP16.2■□□□□ 0.18
PRKCH-201ENST00000332981 DNM1Q05193 864 aaKnown RBP16.2■□□□□ 0.18
PRKCH-201ENST00000332981 CCDC30Q5VVM6 783 aa16.2■□□□□ 0.18
PRKCH-201ENST00000332981 LRRC2Q9BYS8 371 aa16.2■□□□□ 0.18
PRKCH-201ENST00000332981 MYL6BP14649 208 aa16.2■□□□□ 0.18
PRKCH-201ENST00000332981 PDCL3Q9H2J4 239 aa16.2■□□□□ 0.18
PRKCH-201ENST00000332981 BOLA2Q9H3K6 86 aa16.2■□□□□ 0.18
PRKCH-201ENST00000332981 PI4KAP2A4QPH2 592 aa16.19■□□□□ 0.18
PRKCH-201ENST00000332981 MBD3O95983 291 aa16.19■□□□□ 0.18
PRKCH-201ENST00000332981 GNAI3P08754 354 aa16.19■□□□□ 0.18
PRKCH-201ENST00000332981 PI4KAP1Q8N8J0 262 aa16.19■□□□□ 0.18
PRKCH-201ENST00000332981 TRERF1Q96PN7 1200 aa16.19■□□□□ 0.18
PRKCH-201ENST00000332981 IL25Q9H293 177 aa16.19■□□□□ 0.18
PRKCH-201ENST00000332981 CCT4P50991 539 aaKnown RBP16.19■□□□□ 0.18
PRKCH-201ENST00000332981 KLHDC4Q8TBB5 520 aa16.19■□□□□ 0.18
PRKCH-201ENST00000332981 CHMLP26374 656 aa16.18■□□□□ 0.18
PRKCH-201ENST00000332981 ISY1Q9ULR0 285 aaKnown RBP16.18■□□□□ 0.18
PRKCH-201ENST00000332981 OFD1O75665 1012 aa16.18■□□□□ 0.18
PRKCH-201ENST00000332981 CHAF1AQ13111 956 aaPredicted RBP16.18■□□□□ 0.18
PRKCH-201ENST00000332981 FMNL2Q96PY5 1086 aa16.18■□□□□ 0.18
PRKCH-201ENST00000332981 ZFYVE16Q7Z3T8 1539 aa16.18■□□□□ 0.18
PRKCH-201ENST00000332981 RIMS2Q9UQ26 1411 aa16.18■□□□□ 0.18
PRKCH-201ENST00000332981 ZNF771Q7L3S4 317 aaPredicted RBP16.18■□□□□ 0.18
PRKCH-201ENST00000332981 ZKSCAN5Q9Y2L8 839 aa16.18■□□□□ 0.18
PRKCH-201ENST00000332981 MAP3K19Q56UN5 1328 aa16.17■□□□□ 0.18
PRKCH-201ENST00000332981 NBPF7P0C2Y1 421 aaPredicted RBP16.17■□□□□ 0.18
PRKCH-201ENST00000332981 GUCY1B3Q02153 619 aa16.17■□□□□ 0.18
PRKCH-201ENST00000332981 AACSQ86V21 672 aa16.17■□□□□ 0.18
PRKCH-201ENST00000332981 EYA1Q99502 592 aa16.17■□□□□ 0.18
PRKCH-201ENST00000332981 DNAJC2Q99543 621 aaKnown RBP16.17■□□□□ 0.18
PRKCH-201ENST00000332981 SRCIN1Q9C0H9 1055 aa16.17■□□□□ 0.18
PRKCH-201ENST00000332981 A0A087WWV3 80 aa16.17■□□□□ 0.18
PRKCH-201ENST00000332981 AK2P54819 239 aa16.17■□□□□ 0.18
PRKCH-201ENST00000332981 RTL1A6NKG5 1358 aa16.16■□□□□ 0.18
PRKCH-201ENST00000332981 PHF14O94880 888 aa16.16■□□□□ 0.18
PRKCH-201ENST00000332981 MAP3K4Q9Y6R4 1608 aa16.16■□□□□ 0.18
PRKCH-201ENST00000332981 KCNQ3O43525 872 aa16.16■□□□□ 0.18
PRKCH-201ENST00000332981 RAB11FIP4Q86YS3 637 aa16.16■□□□□ 0.18
PRKCH-201ENST00000332981 FSD1Q9BTV5 496 aa16.16■□□□□ 0.18
PRKCH-201ENST00000332981 LARP1BQ659C4 914 aaKnown RBP16.16■□□□□ 0.18
PRKCH-201ENST00000332981 CCDC85AQ96PX6 553 aaPredicted RBP16.16■□□□□ 0.18
PRKCH-201ENST00000332981 GJB2P29033 226 aa16.15■□□□□ 0.18
PRKCH-201ENST00000332981 TRIM5Q9C035 493 aa16.15■□□□□ 0.18
PRKCH-201ENST00000332981 CHPF2Q9P2E5 772 aa16.15■□□□□ 0.18
PRKCH-201ENST00000332981 WDR33Q9C0J8 1336 aaKnown RBP16.15■□□□□ 0.18
PRKCH-201ENST00000332981 CWF19L2Q2TBE0 894 aaKnown RBP16.15■□□□□ 0.18
PRKCH-201ENST00000332981 RASEFQ8IZ41 740 aa16.15■□□□□ 0.18
PRKCH-201ENST00000332981 CLASRPQ8N2M8 674 aaKnown RBP16.15■□□□□ 0.18
PRKCH-201ENST00000332981 EDC3Q96F86 508 aaKnown RBP16.15■□□□□ 0.18
PRKCH-201ENST00000332981 YEATS2Q9ULM3 1422 aa16.15■□□□□ 0.18
PRKCH-201ENST00000332981 CNTROBQ8N137 903 aa16.15■□□□□ 0.18
PRKCH-201ENST00000332981 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.15■□□□□ 0.18
PRKCH-201ENST00000332981 V9GYY5 206 aaPredicted RBP16.15■□□□□ 0.18
PRKCH-201ENST00000332981 SBNO2Q9Y2G9 1366 aa16.15■□□□□ 0.18
PRKCH-201ENST00000332981 TTC21BQ7Z4L5 1316 aa16.14■□□□□ 0.17
PRKCH-201ENST00000332981 H3BQV1 296 aa16.14■□□□□ 0.17
PRKCH-201ENST00000332981 CHL1O00533 1208 aa16.14■□□□□ 0.17
PRKCH-201ENST00000332981 IFFO2Q5TF58 517 aa16.14■□□□□ 0.17
PRKCH-201ENST00000332981 ERCC4Q92889 916 aaPredicted RBP16.14■□□□□ 0.17
PRKCH-201ENST00000332981 C16orf45Q96MC5 204 aaPredicted RBP16.14■□□□□ 0.17
PRKCH-201ENST00000332981 PDRG1Q9NUG6 133 aa16.14■□□□□ 0.17
PRKCH-201ENST00000332981 SPHKAPQ2M3C7 1700 aa16.14■□□□□ 0.17
PRKCH-201ENST00000332981 POGZQ7Z3K3 1410 aa16.14■□□□□ 0.17
PRKCH-201ENST00000332981 DDIT3P35638 169 aa16.14■□□□□ 0.17
PRKCH-201ENST00000332981 LRRC59Q96AG4 307 aaKnown RBP16.14■□□□□ 0.17
PRKCH-201ENST00000332981 CHD1O14646 1710 aa16.14■□□□□ 0.17
PRKCH-201ENST00000332981 IQSEC2Q5JU85 1478 aa16.14■□□□□ 0.17
PRKCH-201ENST00000332981 ZKSCAN1P17029 563 aaPredicted RBP16.13■□□□□ 0.17
PRKCH-201ENST00000332981 STX6O43752 255 aa16.13■□□□□ 0.17
PRKCH-201ENST00000332981 RHPN1Q8TCX5 695 aa16.13■□□□□ 0.17
PRKCH-201ENST00000332981 ZCCHC11Q5TAX3 1644 aaKnown RBP16.13■□□□□ 0.17
PRKCH-201ENST00000332981 IQGAP1P46940 1657 aa16.13■□□□□ 0.17
PRKCH-201ENST00000332981 CEP152O94986 1710 aa16.12■□□□□ 0.17
PRKCH-201ENST00000332981 GNAT3A8MTJ3 354 aa16.12■□□□□ 0.17
PRKCH-201ENST00000332981 SYT1P21579 422 aa16.12■□□□□ 0.17
PRKCH-201ENST00000332981 ZNF445P59923 1031 aa16.12■□□□□ 0.17
PRKCH-201ENST00000332981 SYTL4Q96C24 671 aaPredicted RBP16.12■□□□□ 0.17
PRKCH-201ENST00000332981 FILIP1Q7Z7B0 1213 aa16.12■□□□□ 0.17
PRKCH-201ENST00000332981 NEUROD6Q96NK8 337 aa16.12■□□□□ 0.17
PRKCH-201ENST00000332981 NOL7Q9UMY1 257 aaKnown RBP16.12■□□□□ 0.17
PRKCH-201ENST00000332981 LARGE1O95461 756 aa16.12■□□□□ 0.17
PRKCH-201ENST00000332981 LGR6Q9HBX8 967 aa16.12■□□□□ 0.17
PRKCH-201ENST00000332981 CLASP1Q7Z460 1538 aa16.12■□□□□ 0.17
PRKCH-201ENST00000332981 TULP4Q9NRJ4 1543 aa16.12■□□□□ 0.17
PRKCH-201ENST00000332981 RAB11FIP3O75154 756 aa16.11■□□□□ 0.17
PRKCH-201ENST00000332981 ZNF853P0CG23 659 aa16.11■□□□□ 0.17
PRKCH-201ENST00000332981 VGLL3A8MV65 326 aa16.11■□□□□ 0.17
PRKCH-201ENST00000332981 ZRSR1Q15695 479 aaKnown RBP16.11■□□□□ 0.17
PRKCH-201ENST00000332981 CSPP1Q1MSJ5 1256 aa16.11■□□□□ 0.17
PRKCH-201ENST00000332981 PPP1R9BQ96SB3 815 aa16.11■□□□□ 0.17
PRKCH-201ENST00000332981 PLXNC1O60486 1568 aa16.11■□□□□ 0.17
PRKCH-201ENST00000332981 LUZP1Q86V48 1076 aa16.11■□□□□ 0.17
PRKCH-201ENST00000332981 CSB-PGBD3P0DP91 1061 aa16.1■□□□□ 0.17
PRKCH-201ENST00000332981 HDGFP51858 240 aaKnown RBP16.1■□□□□ 0.17
PRKCH-201ENST00000332981 G3BP1Q13283 466 aaKnown RBP eCLIP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms