RNA–Protein interactions for RNA: ENST00000331923.8

PAXBP1-202, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAXBP1, Length 3,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-202ENST00000331923 G2E3Q7L622 706 aa18.88■□□□□ 0.61
PAXBP1-202ENST00000331923 ZHX1Q9UKY1 873 aaPredicted RBP18.88■□□□□ 0.61
PAXBP1-202ENST00000331923 CEP85Q6P2H3 762 aa18.87■□□□□ 0.61
PAXBP1-202ENST00000331923 FAM177A1Q8N128 213 aaPredicted RBP18.87■□□□□ 0.61
PAXBP1-202ENST00000331923 TNNT3P45378 269 aaPredicted RBP18.87■□□□□ 0.61
PAXBP1-202ENST00000331923 SYNE3Q6ZMZ3 975 aa18.87■□□□□ 0.61
PAXBP1-202ENST00000331923 ARHGAP45Q92619 1136 aa18.87■□□□□ 0.61
PAXBP1-202ENST00000331923 USP26Q9BXU7 913 aa18.87■□□□□ 0.61
PAXBP1-202ENST00000331923 KIF1BPQ96EK5 621 aa18.87■□□□□ 0.61
PAXBP1-202ENST00000331923 PDCL3Q9H2J4 239 aa18.87■□□□□ 0.61
PAXBP1-202ENST00000331923 CD109Q6YHK3 1445 aa18.86■□□□□ 0.61
PAXBP1-202ENST00000331923 LETM1O95202 739 aaPredicted RBP18.86■□□□□ 0.61
PAXBP1-202ENST00000331923 MPRIPQ6WCQ1 1025 aa18.86■□□□□ 0.61
PAXBP1-202ENST00000331923 ANTXR1Q9H6X2 564 aa18.86■□□□□ 0.61
PAXBP1-202ENST00000331923 SPDYE4A6NLX3 237 aa18.86■□□□□ 0.61
PAXBP1-202ENST00000331923 LRSAM1Q6UWE0 723 aa18.86■□□□□ 0.61
PAXBP1-202ENST00000331923 USP48Q86UV5 1035 aa18.86■□□□□ 0.61
PAXBP1-202ENST00000331923 C16orf45Q96MC5 204 aaPredicted RBP18.85■□□□□ 0.61
PAXBP1-202ENST00000331923 DUOX2Q9NRD8 1548 aa18.85■□□□□ 0.61
PAXBP1-202ENST00000331923 PI4KAP2A4QPH2 592 aa18.85■□□□□ 0.61
PAXBP1-202ENST00000331923 PI4KAP1Q8N8J0 262 aa18.85■□□□□ 0.61
PAXBP1-202ENST00000331923 BTBD11A6QL63 1104 aa18.85■□□□□ 0.61
PAXBP1-202ENST00000331923 STX6O43752 255 aa18.84■□□□□ 0.61
PAXBP1-202ENST00000331923 CCDC183Q5T5S1 534 aa18.84■□□□□ 0.61
PAXBP1-202ENST00000331923 MTERF4Q7Z6M4 381 aaKnown RBP18.84■□□□□ 0.61
PAXBP1-202ENST00000331923 LIMCH1Q9UPQ0 1083 aa18.84■□□□□ 0.61
PAXBP1-202ENST00000331923 PDILTQ8N807 584 aa18.84■□□□□ 0.61
PAXBP1-202ENST00000331923 ESYT1Q9BSJ8 1104 aa18.84■□□□□ 0.61
PAXBP1-202ENST00000331923 NFXL1Q6ZNB6 911 aa18.84■□□□□ 0.61
PAXBP1-202ENST00000331923 NSD2O96028 1365 aa18.84■□□□□ 0.61
PAXBP1-202ENST00000331923 RALYLQ86SE5 291 aaKnown RBP18.83■□□□□ 0.61
PAXBP1-202ENST00000331923 C17orf53Q8N3J3 647 aaPredicted RBP18.83■□□□□ 0.61
PAXBP1-202ENST00000331923 GJB2P29033 226 aa18.83■□□□□ 0.61
PAXBP1-202ENST00000331923 EIF4A2Q14240 407 aaKnown RBP18.83■□□□□ 0.61
PAXBP1-202ENST00000331923 MAP3K11Q16584 847 aa18.83■□□□□ 0.61
PAXBP1-202ENST00000331923 TTLL5Q6EMB2 1281 aa18.83■□□□□ 0.61
PAXBP1-202ENST00000331923 TRDNQ13061 729 aa18.83■□□□□ 0.6
PAXBP1-202ENST00000331923 SHANK2Q9UPX8 1470 aa18.82■□□□□ 0.6
PAXBP1-202ENST00000331923 GLRX3O76003 335 aaKnown RBP18.82■□□□□ 0.6
PAXBP1-202ENST00000331923 CEBPAP49715 358 aaPredicted RBP18.82■□□□□ 0.6
PAXBP1-202ENST00000331923 CCDC112Q8NEF3 446 aa18.82■□□□□ 0.6
PAXBP1-202ENST00000331923 IGSF3O75054 1194 aa18.82■□□□□ 0.6
PAXBP1-202ENST00000331923 MAPK8IP2Q13387 824 aaPredicted RBP18.82■□□□□ 0.6
PAXBP1-202ENST00000331923 CPLX2Q6PUV4 134 aaKnown RBP18.82■□□□□ 0.6
PAXBP1-202ENST00000331923 SYTL4Q96C24 671 aaPredicted RBP18.82■□□□□ 0.6
PAXBP1-202ENST00000331923 PTPRTO14522 1441 aa18.81■□□□□ 0.6
PAXBP1-202ENST00000331923 STK38Q15208 465 aa18.81■□□□□ 0.6
PAXBP1-202ENST00000331923 PDCL2Q8N4E4 241 aa18.81■□□□□ 0.6
PAXBP1-202ENST00000331923 TRMT1Q9NXH9 659 aaKnown RBP18.81■□□□□ 0.6
PAXBP1-202ENST00000331923 ZC3H6P61129 1189 aaKnown RBP18.81■□□□□ 0.6
PAXBP1-202ENST00000331923 ZKSCAN5Q9Y2L8 839 aa18.81■□□□□ 0.6
PAXBP1-202ENST00000331923 ABCC10Q5T3U5 1492 aa18.81■□□□□ 0.6
PAXBP1-202ENST00000331923 NPC1L1Q9UHC9 1359 aa18.81■□□□□ 0.6
PAXBP1-202ENST00000331923 ACEP12821 1306 aa18.81■□□□□ 0.6
PAXBP1-202ENST00000331923 GSPT1P15170 499 aaKnown RBP18.81■□□□□ 0.6
PAXBP1-202ENST00000331923 MNS1Q8NEH6 495 aa18.81■□□□□ 0.6
PAXBP1-202ENST00000331923 PLEKHO1Q53GL0 409 aaPredicted RBP18.8■□□□□ 0.6
PAXBP1-202ENST00000331923 TSC1Q92574 1164 aa18.8■□□□□ 0.6
PAXBP1-202ENST00000331923 LRRC2Q9BYS8 371 aa18.8■□□□□ 0.6
PAXBP1-202ENST00000331923 DNM1Q05193 864 aaKnown RBP18.8■□□□□ 0.6
PAXBP1-202ENST00000331923 FKBP4Q02790 459 aaKnown RBP eCLIP18.8■□□□□ 0.6
PAXBP1-202ENST00000331923 PTPRCP08575 1304 aa18.79■□□□□ 0.6
PAXBP1-202ENST00000331923 TRIM29Q14134 588 aa18.79■□□□□ 0.6
PAXBP1-202ENST00000331923 RHPN1Q8TCX5 695 aa18.79■□□□□ 0.6
PAXBP1-202ENST00000331923 WDR7Q9Y4E6 1490 aa18.79■□□□□ 0.6
PAXBP1-202ENST00000331923 FAM173BQ6P4H8 233 aa18.79■□□□□ 0.6
PAXBP1-202ENST00000331923 PA2G4Q9UQ80 394 aaKnown RBP18.79■□□□□ 0.6
PAXBP1-202ENST00000331923 DNAAF4Q8WXU2 420 aa18.78■□□□□ 0.6
PAXBP1-202ENST00000331923 MBD5Q9P267 1494 aa18.78■□□□□ 0.6
PAXBP1-202ENST00000331923 MTHFSDQ2M296 383 aaKnown RBP18.78■□□□□ 0.6
PAXBP1-202ENST00000331923 PLA2R1Q13018 1463 aa18.78■□□□□ 0.6
PAXBP1-202ENST00000331923 CCT2P78371 535 aaKnown RBP18.78■□□□□ 0.6
PAXBP1-202ENST00000331923 RAB11FIP4Q86YS3 637 aa18.77■□□□□ 0.6
PAXBP1-202ENST00000331923 ERC1Q8IUD2 1116 aa18.77■□□□□ 0.6
PAXBP1-202ENST00000331923 TMEM63CQ9P1W3 806 aa18.77■□□□□ 0.6
PAXBP1-202ENST00000331923 CHMP4CQ96CF2 233 aa18.76■□□□□ 0.59
PAXBP1-202ENST00000331923 INSRP06213 1382 aa18.76■□□□□ 0.59
PAXBP1-202ENST00000331923 OFD1O75665 1012 aa18.76■□□□□ 0.59
PAXBP1-202ENST00000331923 PPP6R1Q9UPN7 881 aa18.76■□□□□ 0.59
PAXBP1-202ENST00000331923 RRP12Q5JTH9 1297 aaKnown RBP18.76■□□□□ 0.59
PAXBP1-202ENST00000331923 TARBP1Q13395 1621 aaKnown RBP18.76■□□□□ 0.59
PAXBP1-202ENST00000331923 LMBRD1Q9NUN5 540 aa18.75■□□□□ 0.59
PAXBP1-202ENST00000331923 PIP4K2AP48426 406 aaPredicted RBP18.75■□□□□ 0.59
PAXBP1-202ENST00000331923 ZSCAN31Q96LW9 406 aaPredicted RBP18.75■□□□□ 0.59
PAXBP1-202ENST00000331923 PHAXQ9H814 394 aaKnown RBP18.75■□□□□ 0.59
PAXBP1-202ENST00000331923 GADD45BO75293 160 aaPredicted RBP18.75■□□□□ 0.59
PAXBP1-202ENST00000331923 TPM3P06753 285 aa18.75■□□□□ 0.59
PAXBP1-202ENST00000331923 BRPF1P55201 1214 aaPredicted RBP18.75■□□□□ 0.59
PAXBP1-202ENST00000331923 AKAP17AQ02040 695 aaKnown RBP18.75■□□□□ 0.59
PAXBP1-202ENST00000331923 NOLC1Q14978 699 aaKnown RBP eCLIP18.75■□□□□ 0.59
PAXBP1-202ENST00000331923 ISM2Q6H9L7 571 aa18.75■□□□□ 0.59
PAXBP1-202ENST00000331923 MTMR7Q9Y216 660 aa18.75■□□□□ 0.59
PAXBP1-202ENST00000331923 ZSCAN22P10073 491 aaPredicted RBP18.74■□□□□ 0.59
PAXBP1-202ENST00000331923 SKIDA1Q1XH10 827 aa18.74■□□□□ 0.59
PAXBP1-202ENST00000331923 PPP4R3BQ5MIZ7 849 aa18.74■□□□□ 0.59
PAXBP1-202ENST00000331923 CCDC34Q96HJ3 373 aa18.74■□□□□ 0.59
PAXBP1-202ENST00000331923 MSH6P52701 1360 aa18.74■□□□□ 0.59
PAXBP1-202ENST00000331923 EIF2AK4Q9P2K8 1649 aaKnown RBP18.74■□□□□ 0.59
PAXBP1-202ENST00000331923 NAT10Q9H0A0 1025 aaKnown RBP18.74■□□□□ 0.59
PAXBP1-202ENST00000331923 PNMA6EA0A0J9YXQ4 647 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms