RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 TXLNBQ8N3L3 684 aa24.48■■□□□ 1.51
KDM3B-201ENST00000314358 CRACR2AQ9BSW2 395 aa24.48■■□□□ 1.51
KDM3B-201ENST00000314358 INCENPQ9NQS7 918 aa24.48■■□□□ 1.51
KDM3B-201ENST00000314358 SERPINA10Q9UK55 444 aa24.48■■□□□ 1.51
KDM3B-201ENST00000314358 EXOC6BQ9Y2D4 811 aa24.48■■□□□ 1.51
KDM3B-201ENST00000314358 SCAPERQ9BY12 1400 aa24.48■■□□□ 1.51
KDM3B-201ENST00000314358 SLC26A8Q96RN1 970 aa24.48■■□□□ 1.51
KDM3B-201ENST00000314358 CASQ1P31415 396 aa24.48■■□□□ 1.51
KDM3B-201ENST00000314358 GIMAP7Q8NHV1 300 aa24.48■■□□□ 1.51
KDM3B-201ENST00000314358 SCLT1Q96NL6 688 aa24.48■■□□□ 1.51
KDM3B-201ENST00000314358 BRD4O60885 1362 aaPredicted RBP24.47■■□□□ 1.51
KDM3B-201ENST00000314358 BTBD11A6QL63 1104 aa24.47■■□□□ 1.51
KDM3B-201ENST00000314358 POLA1P09884 1462 aaPredicted RBP24.47■■□□□ 1.51
KDM3B-201ENST00000314358 URI1O94763 535 aaPredicted RBP24.47■■□□□ 1.51
KDM3B-201ENST00000314358 NBPF1Q3BBV0 1214 aa24.47■■□□□ 1.51
KDM3B-201ENST00000314358 MAP3K11Q16584 847 aa24.46■■□□□ 1.51
KDM3B-201ENST00000314358 RNF187Q5TA31 235 aaPredicted RBP24.46■■□□□ 1.51
KDM3B-201ENST00000314358 ESPNB1AK53 854 aa24.46■■□□□ 1.51
KDM3B-201ENST00000314358 CDKL5O76039 1030 aa24.46■■□□□ 1.51
KDM3B-201ENST00000314358 BACH2Q9BYV9 841 aa24.46■■□□□ 1.51
KDM3B-201ENST00000314358 CABP1Q9NZU7 370 aa24.46■■□□□ 1.51
KDM3B-201ENST00000314358 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
KDM3B-201ENST00000314358 SMTNL1A8MU46 457 aa24.46■■□□□ 1.51
KDM3B-201ENST00000314358 HECW1Q76N89 1606 aa24.46■■□□□ 1.51
KDM3B-201ENST00000314358 ZNF397Q8NF99 534 aaPredicted RBP24.46■■□□□ 1.51
KDM3B-201ENST00000314358 HFM1A2PYH4 1435 aa24.45■■□□□ 1.5
KDM3B-201ENST00000314358 ZSCAN25Q6NSZ9 544 aa24.45■■□□□ 1.5
KDM3B-201ENST00000314358 MCM4P33991 863 aa24.45■■□□□ 1.5
KDM3B-201ENST00000314358 PPFIA3O75145 1194 aa24.45■■□□□ 1.5
KDM3B-201ENST00000314358 MVPQ14764 893 aaKnown RBP24.44■■□□□ 1.5
KDM3B-201ENST00000314358 AIDAQ96BJ3 306 aa24.44■■□□□ 1.5
KDM3B-201ENST00000314358 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.44■■□□□ 1.5
KDM3B-201ENST00000314358 GSTTP1A0A1W2PQM5 241 aa24.44■■□□□ 1.5
KDM3B-201ENST00000314358 SLC4A8Q2Y0W8 1093 aa24.44■■□□□ 1.5
KDM3B-201ENST00000314358 SPA17Q15506 151 aa24.44■■□□□ 1.5
KDM3B-201ENST00000314358 ATF7IPQ6VMQ6 1270 aa24.44■■□□□ 1.5
KDM3B-201ENST00000314358 THEMISQ8N1K5 641 aaPredicted RBP24.44■■□□□ 1.5
KDM3B-201ENST00000314358 ZBTB9Q96C00 473 aa24.43■■□□□ 1.5
KDM3B-201ENST00000314358 TROQ12816 1431 aaPredicted RBP24.43■■□□□ 1.5
KDM3B-201ENST00000314358 DESP17661 470 aa24.43■■□□□ 1.5
KDM3B-201ENST00000314358 PRPF40BQ6NWY9 871 aaKnown RBP24.43■■□□□ 1.5
KDM3B-201ENST00000314358 CCDC91Q7Z6B0 441 aa24.43■■□□□ 1.5
KDM3B-201ENST00000314358 TOP2BQ02880 1626 aa24.43■■□□□ 1.5
KDM3B-201ENST00000314358 IFFO1Q0D2I5 559 aa24.43■■□□□ 1.5
KDM3B-201ENST00000314358 RAPGEF3O95398 923 aa24.42■■□□□ 1.5
KDM3B-201ENST00000314358 CACNA2D4Q7Z3S7 1137 aa24.42■■□□□ 1.5
KDM3B-201ENST00000314358 SRRTQ9BXP5 876 aaKnown RBP24.42■■□□□ 1.5
KDM3B-201ENST00000314358 PTPN14Q15678 1187 aa24.42■■□□□ 1.5
KDM3B-201ENST00000314358 CEP126Q9P2H0 1117 aa24.42■■□□□ 1.5
KDM3B-201ENST00000314358 ISM2Q6H9L7 571 aa24.42■■□□□ 1.5
KDM3B-201ENST00000314358 PUS7Q96PZ0 661 aaKnown RBP24.42■■□□□ 1.5
KDM3B-201ENST00000314358 KIF4BQ2VIQ3 1234 aa24.42■■□□□ 1.5
KDM3B-201ENST00000314358 SHTN1A0MZ66 631 aa24.41■■□□□ 1.5
KDM3B-201ENST00000314358 PODXL2Q9NZ53 605 aa24.41■■□□□ 1.5
KDM3B-201ENST00000314358 IMMTQ16891 758 aaKnown RBP24.41■■□□□ 1.5
KDM3B-201ENST00000314358 CKAP2LQ8IYA6 745 aa24.41■■□□□ 1.5
KDM3B-201ENST00000314358 SPTY2D1Q68D10 685 aaPredicted RBP24.41■■□□□ 1.5
KDM3B-201ENST00000314358 PDE3AQ14432 1141 aa24.41■■□□□ 1.5
KDM3B-201ENST00000314358 LUZP1Q86V48 1076 aa24.4■■□□□ 1.5
KDM3B-201ENST00000314358 BOLA2Q9H3K6 86 aa24.4■■□□□ 1.5
KDM3B-201ENST00000314358 PPP6R1Q9UPN7 881 aa24.4■■□□□ 1.5
KDM3B-201ENST00000314358 THUMPD2Q9BTF0 503 aaKnown RBP24.4■■□□□ 1.5
KDM3B-201ENST00000314358 KIAA1107Q9UPP5 1409 aa24.39■■□□□ 1.5
KDM3B-201ENST00000314358 IPO4Q8TEX9 1081 aaKnown RBP24.39■■□□□ 1.5
KDM3B-201ENST00000314358 USP8P40818 1118 aa24.39■■□□□ 1.49
KDM3B-201ENST00000314358 POLR3DP05423 398 aaPredicted RBP24.38■■□□□ 1.49
KDM3B-201ENST00000314358 METTL24Q5JXM2 366 aa24.38■■□□□ 1.49
KDM3B-201ENST00000314358 CCDC144CPQ8IYA2 1237 aa24.38■■□□□ 1.49
KDM3B-201ENST00000314358 TMEM57Q8N5G2 664 aa24.38■■□□□ 1.49
KDM3B-201ENST00000314358 GPATCH11Q8N954 259 aa24.38■■□□□ 1.49
KDM3B-201ENST00000314358 CEP63Q96MT8 703 aa24.38■■□□□ 1.49
KDM3B-201ENST00000314358 ZNF219Q9P2Y4 722 aaPredicted RBP24.38■■□□□ 1.49
KDM3B-201ENST00000314358 SFPQP23246 707 aaKnown RBP eCLIP24.38■■□□□ 1.49
KDM3B-201ENST00000314358 NUP88Q99567 741 aaPredicted RBP24.38■■□□□ 1.49
KDM3B-201ENST00000314358 SEC63Q9UGP8 760 aaKnown RBP24.37■■□□□ 1.49
KDM3B-201ENST00000314358 BIN1O00499 593 aa24.37■■□□□ 1.49
KDM3B-201ENST00000314358 ZC3H6P61129 1189 aaKnown RBP24.37■■□□□ 1.49
KDM3B-201ENST00000314358 CTNNA3Q9UI47 895 aa24.37■■□□□ 1.49
KDM3B-201ENST00000314358 WDR78Q5VTH9 848 aa24.37■■□□□ 1.49
KDM3B-201ENST00000314358 ZSCAN31Q96LW9 406 aaPredicted RBP24.37■■□□□ 1.49
KDM3B-201ENST00000314358 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
KDM3B-201ENST00000314358 TDRD12Q587J7 1177 aaKnown RBP24.37■■□□□ 1.49
KDM3B-201ENST00000314358 SPG7Q9UQ90 795 aa24.37■■□□□ 1.49
KDM3B-201ENST00000314358 KIF5CO60282 957 aa24.36■■□□□ 1.49
KDM3B-201ENST00000314358 POTEJP0CG39 1038 aa24.36■■□□□ 1.49
KDM3B-201ENST00000314358 GDPD2Q9HCC8 539 aa24.36■■□□□ 1.49
KDM3B-201ENST00000314358 C16orf45Q96MC5 204 aaPredicted RBP24.36■■□□□ 1.49
KDM3B-201ENST00000314358 CLIP2Q9UDT6 1046 aa24.36■■□□□ 1.49
KDM3B-201ENST00000314358 SPDYE4A6NLX3 237 aa24.36■■□□□ 1.49
KDM3B-201ENST00000314358 RAB11FIP4Q86YS3 637 aa24.35■■□□□ 1.49
KDM3B-201ENST00000314358 TOP1P11387 765 aaKnown RBP24.35■■□□□ 1.49
KDM3B-201ENST00000314358 IGHMBP2P38935 993 aaKnown RBP24.35■■□□□ 1.49
KDM3B-201ENST00000314358 MKNK2Q9HBH9 465 aa24.35■■□□□ 1.49
KDM3B-201ENST00000314358 PTCD1O75127 700 aaKnown RBP24.35■■□□□ 1.49
KDM3B-201ENST00000314358 CCT2P78371 535 aaKnown RBP24.35■■□□□ 1.49
KDM3B-201ENST00000314358 CEP131Q9UPN4 1083 aa24.35■■□□□ 1.49
KDM3B-201ENST00000314358 FKBP15Q5T1M5 1219 aa24.35■■□□□ 1.49
KDM3B-201ENST00000314358 PANK2Q9BZ23 570 aa24.35■■□□□ 1.49
KDM3B-201ENST00000314358 PRXQ9BXM0 1461 aa24.35■■□□□ 1.49
KDM3B-201ENST00000314358 CRACR2BQ8N4Y2 399 aaPredicted RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 507 ms