RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 MAP3K5Q99683 1374 aa31.04■■■□□ 2.56
ROM1-201ENST00000278833 NFAT5O94916 1531 aa31.03■■■□□ 2.56
ROM1-201ENST00000278833 HSPA1LP34931 641 aa31.03■■■□□ 2.56
ROM1-201ENST00000278833 OSBPL3Q9H4L5 887 aa31.03■■■□□ 2.56
ROM1-201ENST00000278833 GNAT3A8MTJ3 354 aa31.01■■■□□ 2.56
ROM1-201ENST00000278833 K7ELQ4 463 aaPredicted RBP31.01■■■□□ 2.56
ROM1-201ENST00000278833 NLRP6P59044 892 aa31.01■■■□□ 2.56
ROM1-201ENST00000278833 HSP90AB1P08238 724 aaKnown RBP31.01■■■□□ 2.55
ROM1-201ENST00000278833 BRPF3Q9ULD4 1205 aa31.01■■■□□ 2.55
ROM1-201ENST00000278833 SOX12O15370 315 aa30.99■■■□□ 2.55
ROM1-201ENST00000278833 PTMSP20962 102 aa30.99■■■□□ 2.55
ROM1-201ENST00000278833 RAB3GAP1Q15042 981 aa30.99■■■□□ 2.55
ROM1-201ENST00000278833 RABEP1Q15276 862 aa30.99■■■□□ 2.55
ROM1-201ENST00000278833 SPRYD3Q8NCJ5 442 aa30.99■■■□□ 2.55
ROM1-201ENST00000278833 STK31Q9BXU1 1019 aa30.99■■■□□ 2.55
ROM1-201ENST00000278833 KIF1AQ12756 1690 aa30.98■■■□□ 2.55
ROM1-201ENST00000278833 CCDC30Q5VVM6 783 aa30.98■■■□□ 2.55
ROM1-201ENST00000278833 NHSL1Q5SYE7 1610 aa30.98■■■□□ 2.55
ROM1-201ENST00000278833 AHDC1Q5TGY3 1603 aaPredicted RBP30.98■■■□□ 2.55
ROM1-201ENST00000278833 G2E3Q7L622 706 aa30.97■■■□□ 2.55
ROM1-201ENST00000278833 NPHP3Q7Z494 1330 aa30.97■■■□□ 2.55
ROM1-201ENST00000278833 KDM3BQ7LBC6 1761 aa30.97■■■□□ 2.55
ROM1-201ENST00000278833 FSD2A1L4K1 749 aa30.97■■■□□ 2.55
ROM1-201ENST00000278833 XPCQ01831 940 aaPredicted RBP30.96■■■□□ 2.55
ROM1-201ENST00000278833 LMO7Q8WWI1 1683 aa30.96■■■□□ 2.55
ROM1-201ENST00000278833 PHLPP1O60346 1717 aa30.95■■■□□ 2.55
ROM1-201ENST00000278833 CEMIPQ8WUJ3 1361 aa30.94■■■□□ 2.54
ROM1-201ENST00000278833 GNAI2P04899 355 aa30.94■■■□□ 2.54
ROM1-201ENST00000278833 CASC1Q6TDU7 716 aa30.94■■■□□ 2.54
ROM1-201ENST00000278833 USP26Q9BXU7 913 aa30.94■■■□□ 2.54
ROM1-201ENST00000278833 MIS18AQ9NYP9 233 aa30.94■■■□□ 2.54
ROM1-201ENST00000278833 GNAI3P08754 354 aa30.93■■■□□ 2.54
ROM1-201ENST00000278833 CLEC17AQ6ZS10 378 aa30.93■■■□□ 2.54
ROM1-201ENST00000278833 ISY1Q9ULR0 285 aaKnown RBP30.93■■■□□ 2.54
ROM1-201ENST00000278833 C16orf71Q8IYS4 520 aaPredicted RBP30.93■■■□□ 2.54
ROM1-201ENST00000278833 SOS2Q07890 1332 aaPredicted RBP30.92■■■□□ 2.54
ROM1-201ENST00000278833 SALL3Q9BXA9 1300 aa30.92■■■□□ 2.54
ROM1-201ENST00000278833 TRAK2O60296 914 aa30.92■■■□□ 2.54
ROM1-201ENST00000278833 SDSP20132 328 aa30.92■■■□□ 2.54
ROM1-201ENST00000278833 PSME1Q06323 249 aa30.92■■■□□ 2.54
ROM1-201ENST00000278833 FLIIQ13045 1269 aa30.92■■■□□ 2.54
ROM1-201ENST00000278833 CD2BP2O95400 341 aaKnown RBP30.91■■■□□ 2.54
ROM1-201ENST00000278833 GBP4Q96PP9 640 aa30.91■■■□□ 2.54
ROM1-201ENST00000278833 KRT28Q7Z3Y7 464 aa30.91■■■□□ 2.54
ROM1-201ENST00000278833 COL16A1Q07092 1604 aaPredicted RBP30.9■■■□□ 2.54
ROM1-201ENST00000278833 NCAPD2Q15021 1401 aa30.9■■■□□ 2.54
ROM1-201ENST00000278833 PXDNQ92626 1479 aa30.9■■■□□ 2.54
ROM1-201ENST00000278833 TAF7Q15545 349 aaPredicted RBP30.9■■■□□ 2.54
ROM1-201ENST00000278833 OTUD7AQ8TE49 926 aaPredicted RBP30.9■■■□□ 2.54
ROM1-201ENST00000278833 ABTB2Q8N961 1025 aa30.89■■■□□ 2.54
ROM1-201ENST00000278833 IL17REQ8NFR9 667 aa30.89■■■□□ 2.54
ROM1-201ENST00000278833 TNPO1Q92973 898 aaKnown RBP30.89■■■□□ 2.54
ROM1-201ENST00000278833 CAMTA1Q9Y6Y1 1673 aa30.88■■■□□ 2.53
ROM1-201ENST00000278833 IP6K1Q92551 441 aa30.88■■■□□ 2.53
ROM1-201ENST00000278833 F6X3S4 739 aa30.87■■■□□ 2.53
ROM1-201ENST00000278833 REC8O95072 547 aa30.87■■■□□ 2.53
ROM1-201ENST00000278833 HOXB7P09629 217 aa30.87■■■□□ 2.53
ROM1-201ENST00000278833 SLIT3O75094 1523 aa30.86■■■□□ 2.53
ROM1-201ENST00000278833 OVOS2A0A0G2JMS6 1433 aa30.86■■■□□ 2.53
ROM1-201ENST00000278833 IBTKQ9P2D0 1353 aaPredicted RBP30.85■■■□□ 2.53
ROM1-201ENST00000278833 PDE1AP54750 535 aa30.85■■■□□ 2.53
ROM1-201ENST00000278833 ATP8B2P98198 1209 aa30.85■■■□□ 2.53
ROM1-201ENST00000278833 LRRC59Q96AG4 307 aaKnown RBP30.85■■■□□ 2.53
ROM1-201ENST00000278833 SMARCA5O60264 1052 aaPredicted RBP30.84■■■□□ 2.53
ROM1-201ENST00000278833 SLC4A10Q6U841 1118 aa30.84■■■□□ 2.53
ROM1-201ENST00000278833 CHMP4AQ9BY43 222 aa30.84■■■□□ 2.53
ROM1-201ENST00000278833 SKOR2Q2VWA4 1001 aaPredicted RBP30.84■■■□□ 2.53
ROM1-201ENST00000278833 AOX1Q06278 1338 aa30.83■■■□□ 2.53
ROM1-201ENST00000278833 GOLGA6L3A6NEY3 463 aa30.83■■■□□ 2.53
ROM1-201ENST00000278833 RBM42Q9BTD8 480 aaKnown RBP30.83■■■□□ 2.53
ROM1-201ENST00000278833 FKBP5Q13451 457 aaPredicted RBP30.82■■■□□ 2.52
ROM1-201ENST00000278833 ERC2O15083 957 aa30.81■■■□□ 2.52
ROM1-201ENST00000278833 HSP90AA1P07900 732 aaKnown RBP30.8■■■□□ 2.52
ROM1-201ENST00000278833 FAM43AQ8N2R8 423 aa30.8■■■□□ 2.52
ROM1-201ENST00000278833 KCNH5Q8NCM2 988 aa30.8■■■□□ 2.52
ROM1-201ENST00000278833 STAP2Q9UGK3 403 aa30.8■■■□□ 2.52
ROM1-201ENST00000278833 LRRCC1Q9C099 1032 aa30.79■■■□□ 2.52
ROM1-201ENST00000278833 SRCIN1Q9C0H9 1055 aa30.79■■■□□ 2.52
ROM1-201ENST00000278833 SPATA31A3Q5VYP0 1347 aa30.79■■■□□ 2.52
ROM1-201ENST00000278833 IL17RAQ96F46 866 aa30.78■■■□□ 2.52
ROM1-201ENST00000278833 TRPM3Q9HCF6 1732 aaPredicted RBP30.77■■■□□ 2.52
ROM1-201ENST00000278833 RGPD2P0DJD1 1756 aa30.77■■■□□ 2.52
ROM1-201ENST00000278833 EPB41L2O43491 1005 aaKnown RBP30.76■■■□□ 2.52
ROM1-201ENST00000278833 JCADQ9P266 1359 aa30.76■■■□□ 2.51
ROM1-201ENST00000278833 ADAMTS7Q9UKP4 1686 aa30.76■■■□□ 2.51
ROM1-201ENST00000278833 NUTM2GQ5VZR2 741 aa30.75■■■□□ 2.51
ROM1-201ENST00000278833 CWC22Q9HCG8 908 aaKnown RBP30.75■■■□□ 2.51
ROM1-201ENST00000278833 TNS3Q68CZ2 1445 aa30.74■■■□□ 2.51
ROM1-201ENST00000278833 ST18O60284 1047 aa30.74■■■□□ 2.51
ROM1-201ENST00000278833 MRE11P49959 708 aa30.74■■■□□ 2.51
ROM1-201ENST00000278833 LMOD2Q6P5Q4 547 aa30.74■■■□□ 2.51
ROM1-201ENST00000278833 CYP2E1P05181 493 aaPredicted RBP30.74■■■□□ 2.51
ROM1-201ENST00000278833 NUCB2P80303 420 aa30.74■■■□□ 2.51
ROM1-201ENST00000278833 HDGFL1Q5TGJ6 251 aa30.74■■■□□ 2.51
ROM1-201ENST00000278833 SSH3Q8TE77 659 aa30.74■■■□□ 2.51
ROM1-201ENST00000278833 USP44Q9H0E7 712 aa30.73■■■□□ 2.51
ROM1-201ENST00000278833 XRCC6P12956 609 aaKnown RBP eCLIP30.72■■■□□ 2.51
ROM1-201ENST00000278833 MX1P20591 662 aa30.72■■■□□ 2.51
ROM1-201ENST00000278833 CRYBG1Q9Y4K1 1723 aa30.72■■■□□ 2.51
ROM1-201ENST00000278833 SIPA1L3O60292 1781 aaPredicted RBP30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms