RNA–Protein interactions for RNA: ENST00000266058.8

SLIT1-201, Transcript of slit guidance ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLIT1, Length 7,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT1-201ENST00000266058 TTC36A6NLP5 189 aa16.54■□□□□ 0.24
SLIT1-201ENST00000266058 ZMYND15Q9H091 742 aa16.54■□□□□ 0.24
SLIT1-201ENST00000266058 ARHGAP29Q52LW3 1261 aa16.53■□□□□ 0.24
SLIT1-201ENST00000266058 PROSER2Q86WR7 435 aaPredicted RBP16.53■□□□□ 0.24
SLIT1-201ENST00000266058 DAAM2Q86T65 1068 aa16.53■□□□□ 0.24
SLIT1-201ENST00000266058 SMTNL1A8MU46 457 aa16.53■□□□□ 0.24
SLIT1-201ENST00000266058 LRP2BPQ9P2M1 347 aa16.53■□□□□ 0.24
SLIT1-201ENST00000266058 TAF4BQ92750 862 aa16.53■□□□□ 0.24
SLIT1-201ENST00000266058 BTBD11A6QL63 1104 aa16.53■□□□□ 0.24
SLIT1-201ENST00000266058 POTEJP0CG39 1038 aa16.53■□□□□ 0.24
SLIT1-201ENST00000266058 FLIIQ13045 1269 aa16.53■□□□□ 0.24
SLIT1-201ENST00000266058 MCM4P33991 863 aa16.52■□□□□ 0.24
SLIT1-201ENST00000266058 TMCO3Q6UWJ1 677 aa16.52■□□□□ 0.24
SLIT1-201ENST00000266058 GAPVD1Q14C86 1478 aa16.52■□□□□ 0.24
SLIT1-201ENST00000266058 IDH1O75874 414 aaKnown RBP16.52■□□□□ 0.24
SLIT1-201ENST00000266058 NUTM1Q86Y26 1132 aa16.52■□□□□ 0.24
SLIT1-201ENST00000266058 CTNNA3Q9UI47 895 aa16.52■□□□□ 0.24
SLIT1-201ENST00000266058 ZSCAN31Q96LW9 406 aaPredicted RBP16.52■□□□□ 0.24
SLIT1-201ENST00000266058 MAP3K11Q16584 847 aa16.52■□□□□ 0.23
SLIT1-201ENST00000266058 RAB3IL1Q8TBN0 382 aa16.52■□□□□ 0.23
SLIT1-201ENST00000266058 PPP6R1Q9UPN7 881 aa16.52■□□□□ 0.23
SLIT1-201ENST00000266058 PNISRQ8TF01 805 aaKnown RBP16.52■□□□□ 0.23
SLIT1-201ENST00000266058 SCAPERQ9BY12 1400 aa16.51■□□□□ 0.23
SLIT1-201ENST00000266058 HOOK3Q86VS8 718 aa16.51■□□□□ 0.23
SLIT1-201ENST00000266058 CEP126Q9P2H0 1117 aa16.51■□□□□ 0.23
SLIT1-201ENST00000266058 ESPNB1AK53 854 aa16.51■□□□□ 0.23
SLIT1-201ENST00000266058 RRS1Q15050 365 aaKnown RBP16.51■□□□□ 0.23
SLIT1-201ENST00000266058 SPG7Q9UQ90 795 aa16.51■□□□□ 0.23
SLIT1-201ENST00000266058 RNF187Q5TA31 235 aaPredicted RBP16.51■□□□□ 0.23
SLIT1-201ENST00000266058 WDR63Q8IWG1 891 aa16.51■□□□□ 0.23
SLIT1-201ENST00000266058 AFAP1Q8N556 730 aa16.51■□□□□ 0.23
SLIT1-201ENST00000266058 UBXN4Q92575 508 aa16.51■□□□□ 0.23
SLIT1-201ENST00000266058 FERMT3Q86UX7 667 aa16.5■□□□□ 0.23
SLIT1-201ENST00000266058 CCDC148Q8NFR7 591 aa16.5■□□□□ 0.23
SLIT1-201ENST00000266058 LRRC9Q6ZRR7 1453 aa16.5■□□□□ 0.23
SLIT1-201ENST00000266058 CFAP58Q5T655 872 aa16.5■□□□□ 0.23
SLIT1-201ENST00000266058 ZNF397Q8NF99 534 aaPredicted RBP16.5■□□□□ 0.23
SLIT1-201ENST00000266058 SH3BP5O60239 455 aa16.5■□□□□ 0.23
SLIT1-201ENST00000266058 DNA2P51530 1060 aa16.5■□□□□ 0.23
SLIT1-201ENST00000266058 KRT32Q14532 448 aa16.5■□□□□ 0.23
SLIT1-201ENST00000266058 BICDL1Q6ZP65 573 aa16.5■□□□□ 0.23
SLIT1-201ENST00000266058 SRRTQ9BXP5 876 aaKnown RBP16.5■□□□□ 0.23
SLIT1-201ENST00000266058 IFFO1Q0D2I5 559 aa16.5■□□□□ 0.23
SLIT1-201ENST00000266058 ZNF354CQ86Y25 554 aa16.49■□□□□ 0.23
SLIT1-201ENST00000266058 KLHL10Q6JEL2 608 aa16.49■□□□□ 0.23
SLIT1-201ENST00000266058 PDCL2Q8N4E4 241 aa16.49■□□□□ 0.23
SLIT1-201ENST00000266058 EXOC6BQ9Y2D4 811 aa16.49■□□□□ 0.23
SLIT1-201ENST00000266058 CLGNO14967 610 aa16.49■□□□□ 0.23
SLIT1-201ENST00000266058 CTNNA2P26232 953 aa16.49■□□□□ 0.23
SLIT1-201ENST00000266058 IMMTQ16891 758 aaKnown RBP16.49■□□□□ 0.23
SLIT1-201ENST00000266058 CCDC83Q8IWF9 413 aa16.49■□□□□ 0.23
SLIT1-201ENST00000266058 ABCF2Q9UG63 623 aa16.49■□□□□ 0.23
SLIT1-201ENST00000266058 CCDC178Q5BJE1 867 aa16.49■□□□□ 0.23
SLIT1-201ENST00000266058 WASF1Q92558 559 aa16.49■□□□□ 0.23
SLIT1-201ENST00000266058 AIDAQ96BJ3 306 aa16.49■□□□□ 0.23
SLIT1-201ENST00000266058 NCOA2Q15596 1464 aa16.49■□□□□ 0.23
SLIT1-201ENST00000266058 CETN2P41208 172 aa16.48■□□□□ 0.23
SLIT1-201ENST00000266058 PSMC4P43686 418 aa16.48■□□□□ 0.23
SLIT1-201ENST00000266058 CRACR2AQ9BSW2 395 aa16.48■□□□□ 0.23
SLIT1-201ENST00000266058 PPP4R3AQ6IN85 833 aa16.48■□□□□ 0.23
SLIT1-201ENST00000266058 GIGYF2Q6Y7W6 1299 aaKnown RBP16.48■□□□□ 0.23
SLIT1-201ENST00000266058 VTI1AQ96AJ9 217 aa16.48■□□□□ 0.23
SLIT1-201ENST00000266058 NAP1L3Q99457 506 aaPredicted RBP16.47■□□□□ 0.23
SLIT1-201ENST00000266058 CEP131Q9UPN4 1083 aa16.47■□□□□ 0.23
SLIT1-201ENST00000266058 MIS18AQ9NYP9 233 aa16.47■□□□□ 0.23
SLIT1-201ENST00000266058 TMEM57Q8N5G2 664 aa16.47■□□□□ 0.23
SLIT1-201ENST00000266058 LARP1Q6PKG0 1096 aaKnown RBP16.46■□□□□ 0.23
SLIT1-201ENST00000266058 C16orf71Q8IYS4 520 aaPredicted RBP16.46■□□□□ 0.23
SLIT1-201ENST00000266058 FGD5Q6ZNL6 1462 aa16.46■□□□□ 0.23
SLIT1-201ENST00000266058 LRSAM1Q6UWE0 723 aa16.46■□□□□ 0.23
SLIT1-201ENST00000266058 CIZ1Q9ULV3 898 aaPredicted RBP16.46■□□□□ 0.23
SLIT1-201ENST00000266058 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
SLIT1-201ENST00000266058 LMAN1P49257 510 aa16.46■□□□□ 0.22
SLIT1-201ENST00000266058 SPA17Q15506 151 aa16.46■□□□□ 0.22
SLIT1-201ENST00000266058 PTPN14Q15678 1187 aa16.46■□□□□ 0.22
SLIT1-201ENST00000266058 RAD54L2Q9Y4B4 1467 aa16.45■□□□□ 0.22
SLIT1-201ENST00000266058 CASQ1P31415 396 aa16.45■□□□□ 0.22
SLIT1-201ENST00000266058 SMARCA5O60264 1052 aaPredicted RBP16.45■□□□□ 0.22
SLIT1-201ENST00000266058 SFPQP23246 707 aaKnown RBP eCLIP16.45■□□□□ 0.22
SLIT1-201ENST00000266058 ZNF692Q9BU19 519 aaPredicted RBP16.45■□□□□ 0.22
SLIT1-201ENST00000266058 SHTN1A0MZ66 631 aa16.45■□□□□ 0.22
SLIT1-201ENST00000266058 SEPT6Q14141 434 aa16.45■□□□□ 0.22
SLIT1-201ENST00000266058 FERMT2Q96AC1 680 aa16.45■□□□□ 0.22
SLIT1-201ENST00000266058 MINDY4BA8MYZ0 360 aa16.45■□□□□ 0.22
SLIT1-201ENST00000266058 IGHMBP2P38935 993 aaKnown RBP16.45■□□□□ 0.22
SLIT1-201ENST00000266058 TRERF1Q96PN7 1200 aa16.45■□□□□ 0.22
SLIT1-201ENST00000266058 TMX1Q9H3N1 280 aa16.45■□□□□ 0.22
SLIT1-201ENST00000266058 RFX1P22670 979 aa16.44■□□□□ 0.22
SLIT1-201ENST00000266058 PRPF40BQ6NWY9 871 aaKnown RBP16.44■□□□□ 0.22
SLIT1-201ENST00000266058 GUCY1B3Q02153 619 aa16.44■□□□□ 0.22
SLIT1-201ENST00000266058 SEC63Q9UGP8 760 aaKnown RBP16.44■□□□□ 0.22
SLIT1-201ENST00000266058 PPP1R12BO60237 982 aaPredicted RBP16.44■□□□□ 0.22
SLIT1-201ENST00000266058 METTL24Q5JXM2 366 aa16.44■□□□□ 0.22
SLIT1-201ENST00000266058 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
SLIT1-201ENST00000266058 PRDM10Q9NQV6 1147 aa16.44■□□□□ 0.22
SLIT1-201ENST00000266058 LIG1P18858 919 aa16.43■□□□□ 0.22
SLIT1-201ENST00000266058 UBA5Q9GZZ9 404 aa16.43■□□□□ 0.22
SLIT1-201ENST00000266058 XPCQ01831 940 aaPredicted RBP16.43■□□□□ 0.22
SLIT1-201ENST00000266058 GTPBP4Q9BZE4 634 aaKnown RBP16.43■□□□□ 0.22
SLIT1-201ENST00000266058 SEPT10Q9P0V9 454 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms