RNA–Protein interactions for RNA: ENST00000266058.8

SLIT1-201, Transcript of slit guidance ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLIT1, Length 7,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT1-201ENST00000266058 DCAF8L2P0C7V8 631 aa24.19■■□□□ 1.46
SLIT1-201ENST00000266058 PELP1Q8IZL8 1130 aaKnown RBP23.09■■□□□ 1.29
SLIT1-201ENST00000266058 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
SLIT1-201ENST00000266058 EHMT2Q96KQ7 1210 aa22.68■■□□□ 1.22
SLIT1-201ENST00000266058 ERICH6Q7L0X2 663 aa22.59■■□□□ 1.21
SLIT1-201ENST00000266058 SHROOM4Q9ULL8 1493 aa22.42■■□□□ 1.18
SLIT1-201ENST00000266058 MYT1Q01538 1121 aa22.3■■□□□ 1.16
SLIT1-201ENST00000266058 APLP2Q06481 763 aa22.08■■□□□ 1.13
SLIT1-201ENST00000266058 CCER1Q8TC90 406 aaPredicted RBP22.06■■□□□ 1.12
SLIT1-201ENST00000266058 FAM9AQ8IZU1 332 aaPredicted RBP21.98■■□□□ 1.11
SLIT1-201ENST00000266058 TTBK1Q5TCY1 1321 aaPredicted RBP21.94■■□□□ 1.1
SLIT1-201ENST00000266058 NISCHQ9Y2I1 1504 aa21.78■■□□□ 1.08
SLIT1-201ENST00000266058 PCGF6Q9BYE7 350 aa21.73■■□□□ 1.07
SLIT1-201ENST00000266058 RANGAP1P46060 587 aaPredicted RBP21.57■■□□□ 1.04
SLIT1-201ENST00000266058 CENPBP07199 599 aaPredicted RBP21.56■■□□□ 1.04
SLIT1-201ENST00000266058 ATP1B4Q9UN42 357 aaPredicted RBP21.4■■□□□ 1.02
SLIT1-201ENST00000266058 DAXXQ9UER7 740 aaPredicted RBP21.39■■□□□ 1.01
SLIT1-201ENST00000266058 NEFLP07196 543 aa21.31■■□□□ 1
SLIT1-201ENST00000266058 ZEB1P37275 1124 aaPredicted RBP21.28■■□□□ 1
SLIT1-201ENST00000266058 YTHDC1Q96MU7 727 aaKnown RBP21.26■□□□□ 0.99
SLIT1-201ENST00000266058 TRIM41Q8WV44 630 aa21.15■□□□□ 0.98
SLIT1-201ENST00000266058 MYT1LQ9UL68 1186 aa21.08■□□□□ 0.97
SLIT1-201ENST00000266058 UBTFP17480 764 aaKnown RBP21.07■□□□□ 0.96
SLIT1-201ENST00000266058 CHIC1Q5VXU3 224 aa20.97■□□□□ 0.95
SLIT1-201ENST00000266058 PPARGC1BQ86YN6 1023 aaKnown RBP20.93■□□□□ 0.94
SLIT1-201ENST00000266058 POLR3GLQ9BT43 218 aa20.84■□□□□ 0.93
SLIT1-201ENST00000266058 CNGB1Q14028 1251 aaPredicted RBP20.8■□□□□ 0.92
SLIT1-201ENST00000266058 ZNF316A6NFI3 1004 aaPredicted RBP20.77■□□□□ 0.91
SLIT1-201ENST00000266058 SLC4A1APQ9BWU0 796 aaKnown RBP20.75■□□□□ 0.91
SLIT1-201ENST00000266058 CLSPNQ9HAW4 1339 aa20.66■□□□□ 0.9
SLIT1-201ENST00000266058 ITGAEP38570 1179 aa20.63■□□□□ 0.89
SLIT1-201ENST00000266058 RTL5Q5HYW3 569 aaPredicted RBP20.57■□□□□ 0.88
SLIT1-201ENST00000266058 TRIM26Q12899 539 aaPredicted RBP20.54■□□□□ 0.88
SLIT1-201ENST00000266058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.49■□□□□ 0.87
SLIT1-201ENST00000266058 HNRNPUL2Q1KMD3 747 aaKnown RBP20.49■□□□□ 0.87
SLIT1-201ENST00000266058 HRCP23327 699 aa20.47■□□□□ 0.87
SLIT1-201ENST00000266058 BCL11AQ9H165 835 aa20.46■□□□□ 0.87
SLIT1-201ENST00000266058 SLC24A1O60721 1099 aa20.36■□□□□ 0.85
SLIT1-201ENST00000266058 LOC105371045A0A1W2PR82 267 aa20.25■□□□□ 0.83
SLIT1-201ENST00000266058 ZBTB47Q9UFB7 747 aaPredicted RBP20.15■□□□□ 0.82
SLIT1-201ENST00000266058 DIEXFQ68CQ4 756 aaKnown RBP20.08■□□□□ 0.81
SLIT1-201ENST00000266058 EIF5BO60841 1220 aaKnown RBP20.02■□□□□ 0.8
SLIT1-201ENST00000266058 BCANQ96GW7 911 aa19.98■□□□□ 0.79
SLIT1-201ENST00000266058 FAM50AQ14320 339 aaKnown RBP19.96■□□□□ 0.79
SLIT1-201ENST00000266058 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
SLIT1-201ENST00000266058 TRIM52Q96A61 297 aa19.9■□□□□ 0.78
SLIT1-201ENST00000266058 ZNF326Q5BKZ1 582 aaKnown RBP19.79■□□□□ 0.76
SLIT1-201ENST00000266058 GTF3C3Q9Y5Q9 886 aa19.79■□□□□ 0.76
SLIT1-201ENST00000266058 CDK11AQ9UQ88 783 aaPredicted RBP19.76■□□□□ 0.75
SLIT1-201ENST00000266058 CANXP27824 592 aaKnown RBP19.75■□□□□ 0.75
SLIT1-201ENST00000266058 ANP32CO43423 234 aa19.72■□□□□ 0.75
SLIT1-201ENST00000266058 ANP32BQ92688 251 aaKnown RBP19.72■□□□□ 0.75
SLIT1-201ENST00000266058 CDK11BP21127 795 aaKnown RBP19.69■□□□□ 0.74
SLIT1-201ENST00000266058 PLPPR3Q6T4P5 718 aa19.68■□□□□ 0.74
SLIT1-201ENST00000266058 GLIPR1L2Q4G1C9 344 aa19.62■□□□□ 0.73
SLIT1-201ENST00000266058 HSP90AA1P07900 732 aaKnown RBP19.6■□□□□ 0.73
SLIT1-201ENST00000266058 NEFMP07197 916 aa19.57■□□□□ 0.72
SLIT1-201ENST00000266058 NPM2Q86SE8 214 aaKnown RBP19.57■□□□□ 0.72
SLIT1-201ENST00000266058 ARXQ96QS3 562 aa19.56■□□□□ 0.72
SLIT1-201ENST00000266058 TULP1O00294 542 aaPredicted RBP19.54■□□□□ 0.72
SLIT1-201ENST00000266058 A0A0G2JS52 829 aa19.51■□□□□ 0.71
SLIT1-201ENST00000266058 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
SLIT1-201ENST00000266058 ANP32AP39687 249 aaKnown RBP19.47■□□□□ 0.71
SLIT1-201ENST00000266058 FBLN2P98095 1184 aa19.43■□□□□ 0.7
SLIT1-201ENST00000266058 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
SLIT1-201ENST00000266058 ARID3CA6NKF2 412 aa19.37■□□□□ 0.69
SLIT1-201ENST00000266058 PABPN1Q86U42 306 aaKnown RBP eCLIP19.35■□□□□ 0.69
SLIT1-201ENST00000266058 ESF1Q9H501 851 aaKnown RBP19.34■□□□□ 0.69
SLIT1-201ENST00000266058 ACIN1Q9UKV3 1341 aaKnown RBP19.31■□□□□ 0.68
SLIT1-201ENST00000266058 P3H3Q8IVL6 736 aa19.31■□□□□ 0.68
SLIT1-201ENST00000266058 ZNF777Q9ULD5 760 aaPredicted RBP19.24■□□□□ 0.67
SLIT1-201ENST00000266058 FKBP8Q14318 412 aa19.24■□□□□ 0.67
SLIT1-201ENST00000266058 STAG3Q9UJ98 1225 aa19.19■□□□□ 0.66
SLIT1-201ENST00000266058 AMER1Q5JTC6 1135 aaPredicted RBP19.17■□□□□ 0.66
SLIT1-201ENST00000266058 NBR1Q14596 966 aa19.15■□□□□ 0.66
SLIT1-201ENST00000266058 PLEKHG5O94827 1062 aa19.15■□□□□ 0.66
SLIT1-201ENST00000266058 SALL2Q9Y467 1007 aaPredicted RBP19.15■□□□□ 0.66
SLIT1-201ENST00000266058 UPF2Q9HAU5 1272 aaKnown RBP19.14■□□□□ 0.66
SLIT1-201ENST00000266058 HNRNPUQ00839 825 aaKnown RBP eCLIP19.12■□□□□ 0.65
SLIT1-201ENST00000266058 FAM9BQ8IZU0 186 aa19.12■□□□□ 0.65
SLIT1-201ENST00000266058 ABCC9O60706 1549 aa19.1■□□□□ 0.65
SLIT1-201ENST00000266058 CHGAP10645 457 aaKnown RBP19.09■□□□□ 0.65
SLIT1-201ENST00000266058 TNNT2P45379 298 aaPredicted RBP19.07■□□□□ 0.64
SLIT1-201ENST00000266058 TPRNQ4KMQ1 711 aa19.06■□□□□ 0.64
SLIT1-201ENST00000266058 TONSLQ96HA7 1378 aa19.04■□□□□ 0.64
SLIT1-201ENST00000266058 DDX10Q13206 875 aaKnown RBP19.03■□□□□ 0.64
SLIT1-201ENST00000266058 CCDC136Q96JN2 1154 aa18.98■□□□□ 0.63
SLIT1-201ENST00000266058 ZBTB7CA1YPR0 619 aa18.98■□□□□ 0.63
SLIT1-201ENST00000266058 TAOK2Q9UL54 1235 aa18.97■□□□□ 0.63
SLIT1-201ENST00000266058 CSRNP3Q8WYN3 585 aa18.95■□□□□ 0.62
SLIT1-201ENST00000266058 TMC1Q8TDI8 760 aa18.93■□□□□ 0.62
SLIT1-201ENST00000266058 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.92■□□□□ 0.62
SLIT1-201ENST00000266058 PRM3Q9NNZ6 103 aa18.92■□□□□ 0.62
SLIT1-201ENST00000266058 DNTTIP2Q5QJE6 756 aaKnown RBP18.92■□□□□ 0.62
SLIT1-201ENST00000266058 TRIM44Q96DX7 344 aaPredicted RBP18.89■□□□□ 0.61
SLIT1-201ENST00000266058 CLSTN1O94985 981 aa18.88■□□□□ 0.61
SLIT1-201ENST00000266058 IRX6P78412 446 aaPredicted RBP18.87■□□□□ 0.61
SLIT1-201ENST00000266058 WDR43Q15061 677 aaKnown RBP eCLIP18.87■□□□□ 0.61
SLIT1-201ENST00000266058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.87■□□□□ 0.61
SLIT1-201ENST00000266058 ZRSR1Q15695 479 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 374.4 ms