RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 PALD1Q9ULE6 856 aa16.95■□□□□ 0.3
TUBGCP3-201ENST00000261965 ZFYVE9O95405 1425 aa16.94■□□□□ 0.3
TUBGCP3-201ENST00000261965 TTC21BQ7Z4L5 1316 aa16.94■□□□□ 0.3
TUBGCP3-201ENST00000261965 SURF6O75683 361 aaKnown RBP16.94■□□□□ 0.3
TUBGCP3-201ENST00000261965 HAP1P54257 671 aaPredicted RBP16.94■□□□□ 0.3
TUBGCP3-201ENST00000261965 LMTK2Q8IWU2 1503 aa16.94■□□□□ 0.3
TUBGCP3-201ENST00000261965 TMX3Q96JJ7 454 aa16.94■□□□□ 0.3
TUBGCP3-201ENST00000261965 ZBTB9Q96C00 473 aa16.93■□□□□ 0.3
TUBGCP3-201ENST00000261965 HECW2Q9P2P5 1572 aa16.93■□□□□ 0.3
TUBGCP3-201ENST00000261965 CHL1O00533 1208 aa16.93■□□□□ 0.3
TUBGCP3-201ENST00000261965 LRRCC1Q9C099 1032 aa16.93■□□□□ 0.3
TUBGCP3-201ENST00000261965 ZC3H13Q5T200 1668 aaKnown RBP16.93■□□□□ 0.3
TUBGCP3-201ENST00000261965 CDK11BP21127 795 aaKnown RBP16.93■□□□□ 0.3
TUBGCP3-201ENST00000261965 TTC12Q9H892 705 aaPredicted RBP16.93■□□□□ 0.3
TUBGCP3-201ENST00000261965 LMBRD1Q9NUN5 540 aa16.93■□□□□ 0.3
TUBGCP3-201ENST00000261965 MYO3AQ8NEV4 1616 aa16.92■□□□□ 0.3
TUBGCP3-201ENST00000261965 TSPY26PQ9H489 355 aa16.92■□□□□ 0.3
TUBGCP3-201ENST00000261965 MAP3K19Q56UN5 1328 aa16.92■□□□□ 0.3
TUBGCP3-201ENST00000261965 KDM4AO75164 1064 aa16.92■□□□□ 0.3
TUBGCP3-201ENST00000261965 CAMK4Q16566 473 aa16.92■□□□□ 0.3
TUBGCP3-201ENST00000261965 RTL1A6NKG5 1358 aa16.91■□□□□ 0.3
TUBGCP3-201ENST00000261965 MX1P20591 662 aa16.91■□□□□ 0.3
TUBGCP3-201ENST00000261965 FLIIQ13045 1269 aa16.91■□□□□ 0.3
TUBGCP3-201ENST00000261965 UNC5CLQ8IV45 518 aa16.91■□□□□ 0.3
TUBGCP3-201ENST00000261965 ARHGEF28Q8N1W1 1705 aaKnown RBP16.91■□□□□ 0.3
TUBGCP3-201ENST00000261965 ZNF771Q7L3S4 317 aaPredicted RBP16.91■□□□□ 0.3
TUBGCP3-201ENST00000261965 ADGRB2O60241 1585 aa16.91■□□□□ 0.3
TUBGCP3-201ENST00000261965 HSP90B1P14625 803 aaKnown RBP16.91■□□□□ 0.3
TUBGCP3-201ENST00000261965 CPA1P15085 419 aa16.9■□□□□ 0.3
TUBGCP3-201ENST00000261965 GPT2Q8TD30 523 aa16.9■□□□□ 0.3
TUBGCP3-201ENST00000261965 STK3Q13188 491 aa16.9■□□□□ 0.3
TUBGCP3-201ENST00000261965 VIRMAQ69YN4 1812 aaKnown RBP16.9■□□□□ 0.3
TUBGCP3-201ENST00000261965 IFT172Q9UG01 1749 aa16.9■□□□□ 0.3
TUBGCP3-201ENST00000261965 UBTFL1P0CB47 393 aaPredicted RBP16.9■□□□□ 0.3
TUBGCP3-201ENST00000261965 CCDC39Q9UFE4 941 aa16.9■□□□□ 0.3
TUBGCP3-201ENST00000261965 SMC3Q9UQE7 1217 aa16.9■□□□□ 0.3
TUBGCP3-201ENST00000261965 BRPF1P55201 1214 aaPredicted RBP16.89■□□□□ 0.29
TUBGCP3-201ENST00000261965 JARID2Q92833 1246 aaPredicted RBP16.89■□□□□ 0.29
TUBGCP3-201ENST00000261965 PHAXQ9H814 394 aaKnown RBP16.89■□□□□ 0.29
TUBGCP3-201ENST00000261965 TMEM63CQ9P1W3 806 aa16.89■□□□□ 0.29
TUBGCP3-201ENST00000261965 SIGLEC1Q9BZZ2 1709 aa16.89■□□□□ 0.29
TUBGCP3-201ENST00000261965 PTCH1Q13635 1447 aa16.89■□□□□ 0.29
TUBGCP3-201ENST00000261965 HDGFP51858 240 aaKnown RBP16.89■□□□□ 0.29
TUBGCP3-201ENST00000261965 EYA1Q99502 592 aa16.89■□□□□ 0.29
TUBGCP3-201ENST00000261965 PIK3C2BO00750 1634 aa16.89■□□□□ 0.29
TUBGCP3-201ENST00000261965 HCLS1P14317 486 aaPredicted RBP16.88■□□□□ 0.29
TUBGCP3-201ENST00000261965 ARHGEF40Q8TER5 1519 aa16.88■□□□□ 0.29
TUBGCP3-201ENST00000261965 HDGFL1Q5TGJ6 251 aa16.88■□□□□ 0.29
TUBGCP3-201ENST00000261965 PDCL3Q9H2J4 239 aa16.88■□□□□ 0.29
TUBGCP3-201ENST00000261965 SPG7Q9UQ90 795 aa16.88■□□□□ 0.29
TUBGCP3-201ENST00000261965 ZNF330Q9Y3S2 320 aaPredicted RBP16.88■□□□□ 0.29
TUBGCP3-201ENST00000261965 CWC27Q6UX04 472 aaKnown RBP16.88■□□□□ 0.29
TUBGCP3-201ENST00000261965 ZDHHC9Q9Y397 364 aa16.88■□□□□ 0.29
TUBGCP3-201ENST00000261965 CCT4P50991 539 aaKnown RBP16.87■□□□□ 0.29
TUBGCP3-201ENST00000261965 EDC4Q6P2E9 1401 aaKnown RBP16.87■□□□□ 0.29
TUBGCP3-201ENST00000261965 PHF14O94880 888 aa16.87■□□□□ 0.29
TUBGCP3-201ENST00000261965 DIAPH3Q9NSV4 1193 aa16.87■□□□□ 0.29
TUBGCP3-201ENST00000261965 BICD2Q8TD16 824 aa16.86■□□□□ 0.29
TUBGCP3-201ENST00000261965 ESYT1Q9BSJ8 1104 aa16.86■□□□□ 0.29
TUBGCP3-201ENST00000261965 ALKQ9UM73 1620 aa16.86■□□□□ 0.29
TUBGCP3-201ENST00000261965 SRGAP3O43295 1099 aa16.86■□□□□ 0.29
TUBGCP3-201ENST00000261965 ISY1Q9ULR0 285 aaKnown RBP16.86■□□□□ 0.29
TUBGCP3-201ENST00000261965 CSPP1Q1MSJ5 1256 aa16.86■□□□□ 0.29
TUBGCP3-201ENST00000261965 TCEANC2Q96MN5 208 aa16.86■□□□□ 0.29
TUBGCP3-201ENST00000261965 CCDC30Q5VVM6 783 aa16.85■□□□□ 0.29
TUBGCP3-201ENST00000261965 ABTB2Q8N961 1025 aa16.85■□□□□ 0.29
TUBGCP3-201ENST00000261965 CWC22Q9HCG8 908 aaKnown RBP16.85■□□□□ 0.29
TUBGCP3-201ENST00000261965 NCOA3Q9Y6Q9 1424 aa16.85■□□□□ 0.29
TUBGCP3-201ENST00000261965 GADD45BO75293 160 aaPredicted RBP16.85■□□□□ 0.29
TUBGCP3-201ENST00000261965 PTPRCP08575 1304 aa16.85■□□□□ 0.29
TUBGCP3-201ENST00000261965 CPS1P31327 1500 aa16.85■□□□□ 0.29
TUBGCP3-201ENST00000261965 FMNL2Q96PY5 1086 aa16.85■□□□□ 0.29
TUBGCP3-201ENST00000261965 GNAI3P08754 354 aa16.84■□□□□ 0.29
TUBGCP3-201ENST00000261965 AIMP1Q12904 312 aaKnown RBP16.84■□□□□ 0.29
TUBGCP3-201ENST00000261965 GIMAP6Q6P9H5 292 aa16.83■□□□□ 0.29
TUBGCP3-201ENST00000261965 PPP1R42Q7Z4L9 355 aa16.83■□□□□ 0.29
TUBGCP3-201ENST00000261965 MED14O60244 1454 aa16.83■□□□□ 0.29
TUBGCP3-201ENST00000261965 CKAP2LQ8IYA6 745 aa16.83■□□□□ 0.28
TUBGCP3-201ENST00000261965 IL25Q9H293 177 aa16.83■□□□□ 0.28
TUBGCP3-201ENST00000261965 AMOTL2Q9Y2J4 779 aa16.83■□□□□ 0.28
TUBGCP3-201ENST00000261965 CHMLP26374 656 aa16.83■□□□□ 0.28
TUBGCP3-201ENST00000261965 TRIM5Q9C035 493 aa16.83■□□□□ 0.28
TUBGCP3-201ENST00000261965 MYO5BQ9ULV0 1848 aa16.83■□□□□ 0.28
TUBGCP3-201ENST00000261965 PIK3R4Q99570 1358 aa16.82■□□□□ 0.28
TUBGCP3-201ENST00000261965 LTKP29376 864 aa16.82■□□□□ 0.28
TUBGCP3-201ENST00000261965 TAF7Q15545 349 aaPredicted RBP16.82■□□□□ 0.28
TUBGCP3-201ENST00000261965 TRERF1Q96PN7 1200 aa16.82■□□□□ 0.28
TUBGCP3-201ENST00000261965 PODXL2Q9NZ53 605 aa16.82■□□□□ 0.28
TUBGCP3-201ENST00000261965 MAP2P11137 1827 aaKnown RBP16.82■□□□□ 0.28
TUBGCP3-201ENST00000261965 NEURL4Q96JN8 1562 aa16.82■□□□□ 0.28
TUBGCP3-201ENST00000261965 MBD3O95983 291 aa16.82■□□□□ 0.28
TUBGCP3-201ENST00000261965 STK11IPQ8N1F8 1099 aa16.82■□□□□ 0.28
TUBGCP3-201ENST00000261965 ROBO2Q9HCK4 1378 aa16.81■□□□□ 0.28
TUBGCP3-201ENST00000261965 GNAT3A8MTJ3 354 aa16.81■□□□□ 0.28
TUBGCP3-201ENST00000261965 CCDC83Q8IWF9 413 aa16.81■□□□□ 0.28
TUBGCP3-201ENST00000261965 ATP10DQ9P241 1426 aa16.8■□□□□ 0.28
TUBGCP3-201ENST00000261965 SIL1Q9H173 461 aa16.8■□□□□ 0.28
TUBGCP3-201ENST00000261965 DIP2CQ9Y2E4 1556 aa16.8■□□□□ 0.28
TUBGCP3-201ENST00000261965 TFIP11Q9UBB9 837 aaKnown RBP16.8■□□□□ 0.28
TUBGCP3-201ENST00000261965 CCAR2Q8N163 923 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms