RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 CAMSAP1Q5T5Y3 1602 aa20.4■□□□□ 0.86
SGPP1-201ENST00000247225 PTCH1Q13635 1447 aa20.4■□□□□ 0.86
SGPP1-201ENST00000247225 HAP1P54257 671 aaPredicted RBP20.4■□□□□ 0.86
SGPP1-201ENST00000247225 CD163L1Q9NR16 1453 aa20.4■□□□□ 0.86
SGPP1-201ENST00000247225 MBD3O95983 291 aa20.39■□□□□ 0.86
SGPP1-201ENST00000247225 UBTFL1P0CB47 393 aaPredicted RBP20.39■□□□□ 0.86
SGPP1-201ENST00000247225 SYAP1Q96A49 352 aaPredicted RBP20.39■□□□□ 0.86
SGPP1-201ENST00000247225 INO80Q9ULG1 1556 aaPredicted RBP20.39■□□□□ 0.85
SGPP1-201ENST00000247225 UHRF1BP1LA0JNW5 1464 aa20.39■□□□□ 0.85
SGPP1-201ENST00000247225 PHAXQ9H814 394 aaKnown RBP20.38■□□□□ 0.85
SGPP1-201ENST00000247225 CAMK4Q16566 473 aa20.38■□□□□ 0.85
SGPP1-201ENST00000247225 FAM173BQ6P4H8 233 aa20.38■□□□□ 0.85
SGPP1-201ENST00000247225 CCDC83Q8IWF9 413 aa20.38■□□□□ 0.85
SGPP1-201ENST00000247225 DEPDC5O75140 1603 aa20.37■□□□□ 0.85
SGPP1-201ENST00000247225 FOSBP53539 338 aa20.37■□□□□ 0.85
SGPP1-201ENST00000247225 RBM33Q96EV2 1170 aaKnown RBP20.37■□□□□ 0.85
SGPP1-201ENST00000247225 ACEP12821 1306 aa20.37■□□□□ 0.85
SGPP1-201ENST00000247225 ADGRB2O60241 1585 aa20.37■□□□□ 0.85
SGPP1-201ENST00000247225 SRGAP3O43295 1099 aa20.37■□□□□ 0.85
SGPP1-201ENST00000247225 CCT4P50991 539 aaKnown RBP20.37■□□□□ 0.85
SGPP1-201ENST00000247225 SETBP1Q9Y6X0 1596 aa20.36■□□□□ 0.85
SGPP1-201ENST00000247225 KIDINS220Q9ULH0 1771 aa20.36■□□□□ 0.85
SGPP1-201ENST00000247225 ADCY5O95622 1261 aa20.36■□□□□ 0.85
SGPP1-201ENST00000247225 OSCARQ8IYS5 282 aa20.36■□□□□ 0.85
SGPP1-201ENST00000247225 SMC3Q9UQE7 1217 aa20.36■□□□□ 0.85
SGPP1-201ENST00000247225 FAM69CQ0P6D2 419 aa20.36■□□□□ 0.85
SGPP1-201ENST00000247225 NECAB1Q8N987 351 aa20.36■□□□□ 0.85
SGPP1-201ENST00000247225 SRCIN1Q9C0H9 1055 aa20.36■□□□□ 0.85
SGPP1-201ENST00000247225 BRD1O95696 1058 aa20.35■□□□□ 0.85
SGPP1-201ENST00000247225 ZHX1Q9UKY1 873 aaPredicted RBP20.35■□□□□ 0.85
SGPP1-201ENST00000247225 PPFIA3O75145 1194 aa20.35■□□□□ 0.85
SGPP1-201ENST00000247225 ABCC3O15438 1527 aa20.35■□□□□ 0.85
SGPP1-201ENST00000247225 DRC7Q8IY82 874 aa20.35■□□□□ 0.85
SGPP1-201ENST00000247225 MAP3K19Q56UN5 1328 aa20.35■□□□□ 0.85
SGPP1-201ENST00000247225 CASTP20810 708 aaKnown RBP20.34■□□□□ 0.85
SGPP1-201ENST00000247225 ZFYVE9O95405 1425 aa20.34■□□□□ 0.85
SGPP1-201ENST00000247225 PPP1R42Q7Z4L9 355 aa20.34■□□□□ 0.85
SGPP1-201ENST00000247225 MED14O60244 1454 aa20.34■□□□□ 0.85
SGPP1-201ENST00000247225 NLRP6P59044 892 aa20.33■□□□□ 0.85
SGPP1-201ENST00000247225 CBX1P83916 185 aa20.33■□□□□ 0.85
SGPP1-201ENST00000247225 HDGFL1Q5TGJ6 251 aa20.33■□□□□ 0.85
SGPP1-201ENST00000247225 CLEC17AQ6ZS10 378 aa20.33■□□□□ 0.85
SGPP1-201ENST00000247225 CFAP74Q9C0B2 1584 aa20.33■□□□□ 0.84
SGPP1-201ENST00000247225 PTPRCP08575 1304 aa20.33■□□□□ 0.84
SGPP1-201ENST00000247225 IGSF3O75054 1194 aa20.33■□□□□ 0.84
SGPP1-201ENST00000247225 STK3Q13188 491 aa20.33■□□□□ 0.84
SGPP1-201ENST00000247225 LMOD2Q6P5Q4 547 aa20.33■□□□□ 0.84
SGPP1-201ENST00000247225 FBXW7Q969H0 707 aa20.33■□□□□ 0.84
SGPP1-201ENST00000247225 RASEFQ8IZ41 740 aa20.32■□□□□ 0.84
SGPP1-201ENST00000247225 PTPRMP28827 1452 aa20.32■□□□□ 0.84
SGPP1-201ENST00000247225 METP08581 1390 aa20.32■□□□□ 0.84
SGPP1-201ENST00000247225 PRR36Q9H6K5 1346 aa20.32■□□□□ 0.84
SGPP1-201ENST00000247225 GNAI3P08754 354 aa20.32■□□□□ 0.84
SGPP1-201ENST00000247225 CSPP1Q1MSJ5 1256 aa20.32■□□□□ 0.84
SGPP1-201ENST00000247225 ATP10DQ9P241 1426 aa20.32■□□□□ 0.84
SGPP1-201ENST00000247225 PIK3R4Q99570 1358 aa20.32■□□□□ 0.84
SGPP1-201ENST00000247225 TTC21BQ7Z4L5 1316 aa20.32■□□□□ 0.84
SGPP1-201ENST00000247225 DNM1Q05193 864 aaKnown RBP20.32■□□□□ 0.84
SGPP1-201ENST00000247225 AK2P54819 239 aa20.31■□□□□ 0.84
SGPP1-201ENST00000247225 WDR33Q9C0J8 1336 aaKnown RBP20.31■□□□□ 0.84
SGPP1-201ENST00000247225 PRPF40BQ6NWY9 871 aaKnown RBP20.31■□□□□ 0.84
SGPP1-201ENST00000247225 PDLIM2Q96JY6 352 aa20.31■□□□□ 0.84
SGPP1-201ENST00000247225 DIAPH3Q9NSV4 1193 aa20.31■□□□□ 0.84
SGPP1-201ENST00000247225 SPDYE4A6NLX3 237 aa20.3■□□□□ 0.84
SGPP1-201ENST00000247225 CCDC30Q5VVM6 783 aa20.3■□□□□ 0.84
SGPP1-201ENST00000247225 JAKMIP1Q96N16 626 aaKnown RBP20.3■□□□□ 0.84
SGPP1-201ENST00000247225 EYA1Q99502 592 aa20.3■□□□□ 0.84
SGPP1-201ENST00000247225 CKAP2LQ8IYA6 745 aa20.3■□□□□ 0.84
SGPP1-201ENST00000247225 TFIP11Q9UBB9 837 aaKnown RBP20.3■□□□□ 0.84
SGPP1-201ENST00000247225 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
SGPP1-201ENST00000247225 NAP1L2Q9ULW6 460 aaPredicted RBP20.29■□□□□ 0.84
SGPP1-201ENST00000247225 PHF14O94880 888 aa20.29■□□□□ 0.84
SGPP1-201ENST00000247225 ATP8B2P98198 1209 aa20.29■□□□□ 0.84
SGPP1-201ENST00000247225 SASS6Q6UVJ0 657 aa20.29■□□□□ 0.84
SGPP1-201ENST00000247225 ZNF500O60304 480 aaPredicted RBP20.29■□□□□ 0.84
SGPP1-201ENST00000247225 SYT1P21579 422 aa20.29■□□□□ 0.84
SGPP1-201ENST00000247225 CEBPZQ03701 1054 aaKnown RBP20.29■□□□□ 0.84
SGPP1-201ENST00000247225 AIMP1Q12904 312 aaKnown RBP20.29■□□□□ 0.84
SGPP1-201ENST00000247225 SIL1Q9H173 461 aa20.29■□□□□ 0.84
SGPP1-201ENST00000247225 PA2G4Q9UQ80 394 aaKnown RBP20.29■□□□□ 0.84
SGPP1-201ENST00000247225 NEXMIFQ5QGS0 1516 aa20.28■□□□□ 0.84
SGPP1-201ENST00000247225 MYO3AQ8NEV4 1616 aa20.28■□□□□ 0.84
SGPP1-201ENST00000247225 GOLGA6L4A6NEF3 574 aa20.28■□□□□ 0.84
SGPP1-201ENST00000247225 LARGE1O95461 756 aa20.28■□□□□ 0.84
SGPP1-201ENST00000247225 NBPF7P0C2Y1 421 aaPredicted RBP20.28■□□□□ 0.84
SGPP1-201ENST00000247225 MCM2P49736 904 aa20.28■□□□□ 0.84
SGPP1-201ENST00000247225 PPLO60437 1756 aa20.28■□□□□ 0.84
SGPP1-201ENST00000247225 STX6O43752 255 aa20.27■□□□□ 0.84
SGPP1-201ENST00000247225 NOLC1Q14978 699 aaKnown RBP eCLIP20.27■□□□□ 0.84
SGPP1-201ENST00000247225 USP44Q9H0E7 712 aa20.27■□□□□ 0.83
SGPP1-201ENST00000247225 ZC3H13Q5T200 1668 aaKnown RBP20.27■□□□□ 0.83
SGPP1-201ENST00000247225 GJB2P29033 226 aa20.25■□□□□ 0.83
SGPP1-201ENST00000247225 RHPN1Q8TCX5 695 aa20.25■□□□□ 0.83
SGPP1-201ENST00000247225 ARHGEF28Q8N1W1 1705 aaKnown RBP20.25■□□□□ 0.83
SGPP1-201ENST00000247225 PI4KAP2A4QPH2 592 aa20.25■□□□□ 0.83
SGPP1-201ENST00000247225 CEBPAP49715 358 aaPredicted RBP20.25■□□□□ 0.83
SGPP1-201ENST00000247225 PI4KAP1Q8N8J0 262 aa20.25■□□□□ 0.83
SGPP1-201ENST00000247225 ZNF592Q92610 1267 aa20.25■□□□□ 0.83
SGPP1-201ENST00000247225 SNX14Q9Y5W7 946 aa20.25■□□□□ 0.83
SGPP1-201ENST00000247225 IBTKQ9P2D0 1353 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms