RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 C1orf141Q5JVX7 400 aa18.84■□□□□ 0.61
DDX49-201ENST00000247003 ZNF530Q6P9A1 599 aaPredicted RBP18.84■□□□□ 0.61
DDX49-201ENST00000247003 ALS2Q96Q42 1657 aa18.84■□□□□ 0.61
DDX49-201ENST00000247003 MST1RQ04912 1400 aa18.84■□□□□ 0.61
DDX49-201ENST00000247003 NCOA3Q9Y6Q9 1424 aa18.84■□□□□ 0.61
DDX49-201ENST00000247003 TEFQ10587 303 aa18.84■□□□□ 0.61
DDX49-201ENST00000247003 ANKRD24Q8TF21 1146 aa18.84■□□□□ 0.61
DDX49-201ENST00000247003 LRRC59Q96AG4 307 aaKnown RBP18.84■□□□□ 0.61
DDX49-201ENST00000247003 F6X3S4 739 aa18.83■□□□□ 0.6
DDX49-201ENST00000247003 HDGFL1Q5TGJ6 251 aa18.83■□□□□ 0.6
DDX49-201ENST00000247003 OVOS2A0A0G2JMS6 1433 aa18.82■□□□□ 0.6
DDX49-201ENST00000247003 TMEM94Q12767 1356 aa18.82■□□□□ 0.6
DDX49-201ENST00000247003 GNAI3P08754 354 aa18.81■□□□□ 0.6
DDX49-201ENST00000247003 NECTIN2Q92692 538 aa18.81■□□□□ 0.6
DDX49-201ENST00000247003 GNAI2P04899 355 aa18.81■□□□□ 0.6
DDX49-201ENST00000247003 HOXB7P09629 217 aa18.81■□□□□ 0.6
DDX49-201ENST00000247003 CDC45O75419 566 aa18.79■□□□□ 0.6
DDX49-201ENST00000247003 STRCP1A6NGW2 1772 aa18.78■□□□□ 0.6
DDX49-201ENST00000247003 BTBD11A6QL63 1104 aa18.78■□□□□ 0.6
DDX49-201ENST00000247003 DEKP35659 375 aaKnown RBP18.78■□□□□ 0.6
DDX49-201ENST00000247003 NFKBIBQ15653 356 aa18.78■□□□□ 0.6
DDX49-201ENST00000247003 CADPS2Q86UW7 1296 aa18.78■□□□□ 0.6
DDX49-201ENST00000247003 LGR6Q9HBX8 967 aa18.77■□□□□ 0.6
DDX49-201ENST00000247003 NPHP3Q7Z494 1330 aa18.77■□□□□ 0.6
DDX49-201ENST00000247003 EIF4A1P60842 406 aaKnown RBP18.77■□□□□ 0.59
DDX49-201ENST00000247003 PLEKHM2Q8IWE5 1019 aa18.77■□□□□ 0.59
DDX49-201ENST00000247003 TBC1D2Q9BYX2 928 aa18.77■□□□□ 0.59
DDX49-201ENST00000247003 RGPD5Q99666 1765 aa18.76■□□□□ 0.59
DDX49-201ENST00000247003 PXDNQ92626 1479 aa18.76■□□□□ 0.59
DDX49-201ENST00000247003 RBM25P49756 843 aaKnown RBP18.76■□□□□ 0.59
DDX49-201ENST00000247003 MPRIPQ6WCQ1 1025 aa18.76■□□□□ 0.59
DDX49-201ENST00000247003 BCL11AQ9H165 835 aa18.76■□□□□ 0.59
DDX49-201ENST00000247003 ERBB3P21860 1342 aa18.76■□□□□ 0.59
DDX49-201ENST00000247003 RNMTO43148 476 aaKnown RBP18.75■□□□□ 0.59
DDX49-201ENST00000247003 TTC22Q5TAA0 569 aa18.75■□□□□ 0.59
DDX49-201ENST00000247003 TBC1D9Q6ZT07 1266 aa18.75■□□□□ 0.59
DDX49-201ENST00000247003 HSCBQ8IWL3 235 aa18.75■□□□□ 0.59
DDX49-201ENST00000247003 APBB1O00213 710 aa18.74■□□□□ 0.59
DDX49-201ENST00000247003 EIF2S2P20042 333 aaKnown RBP18.74■□□□□ 0.59
DDX49-201ENST00000247003 CASC1Q6TDU7 716 aa18.74■□□□□ 0.59
DDX49-201ENST00000247003 TNS3Q68CZ2 1445 aa18.74■□□□□ 0.59
DDX49-201ENST00000247003 ABCC6O95255 1503 aa18.74■□□□□ 0.59
DDX49-201ENST00000247003 ZC3H6P61129 1189 aaKnown RBP18.74■□□□□ 0.59
DDX49-201ENST00000247003 RAPGEF4Q8WZA2 1011 aa18.73■□□□□ 0.59
DDX49-201ENST00000247003 SLKQ9H2G2 1235 aaPredicted RBP18.73■□□□□ 0.59
DDX49-201ENST00000247003 AXIN2Q9Y2T1 843 aa18.73■□□□□ 0.59
DDX49-201ENST00000247003 UBTFL1P0CB47 393 aaPredicted RBP18.72■□□□□ 0.59
DDX49-201ENST00000247003 GSPT1P15170 499 aaKnown RBP18.72■□□□□ 0.59
DDX49-201ENST00000247003 SRCIN1Q9C0H9 1055 aa18.71■□□□□ 0.59
DDX49-201ENST00000247003 PHAXQ9H814 394 aaKnown RBP18.71■□□□□ 0.59
DDX49-201ENST00000247003 CHPF2Q9P2E5 772 aa18.71■□□□□ 0.59
DDX49-201ENST00000247003 SIPA1L3O60292 1781 aaPredicted RBP18.71■□□□□ 0.59
DDX49-201ENST00000247003 ADAMTS7Q9UKP4 1686 aa18.7■□□□□ 0.58
DDX49-201ENST00000247003 SMARCA5O60264 1052 aaPredicted RBP18.7■□□□□ 0.58
DDX49-201ENST00000247003 TATP17735 454 aaPredicted RBP18.7■□□□□ 0.58
DDX49-201ENST00000247003 C16orf71Q8IYS4 520 aaPredicted RBP18.7■□□□□ 0.58
DDX49-201ENST00000247003 NLRP2Q9NX02 1062 aa18.7■□□□□ 0.58
DDX49-201ENST00000247003 CSB-PGBD3P0DP91 1061 aa18.69■□□□□ 0.58
DDX49-201ENST00000247003 ATP8B2P98198 1209 aa18.69■□□□□ 0.58
DDX49-201ENST00000247003 LRRCC1Q9C099 1032 aa18.69■□□□□ 0.58
DDX49-201ENST00000247003 DBF4Q9UBU7 674 aaPredicted RBP18.69■□□□□ 0.58
DDX49-201ENST00000247003 LRRFIP2Q9Y608 721 aaKnown RBP18.69■□□□□ 0.58
DDX49-201ENST00000247003 PLEKHG2Q9H7P9 1386 aa18.68■□□□□ 0.58
DDX49-201ENST00000247003 SPG7Q9UQ90 795 aa18.68■□□□□ 0.58
DDX49-201ENST00000247003 DNAAF4Q8WXU2 420 aa18.67■□□□□ 0.58
DDX49-201ENST00000247003 CRYBG1Q9Y4K1 1723 aa18.67■□□□□ 0.58
DDX49-201ENST00000247003 KCNQ3O43525 872 aa18.67■□□□□ 0.58
DDX49-201ENST00000247003 DDX17Q92841 729 aaKnown RBP18.67■□□□□ 0.58
DDX49-201ENST00000247003 EXOC6BQ9Y2D4 811 aa18.67■□□□□ 0.58
DDX49-201ENST00000247003 COL18A1P39060 1754 aa18.66■□□□□ 0.58
DDX49-201ENST00000247003 OTUD7AQ8TE49 926 aaPredicted RBP18.66■□□□□ 0.58
DDX49-201ENST00000247003 SNX21Q969T3 373 aa18.66■□□□□ 0.58
DDX49-201ENST00000247003 USP44Q9H0E7 712 aa18.66■□□□□ 0.58
DDX49-201ENST00000247003 XIRP1Q702N8 1843 aaKnown RBP18.66■□□□□ 0.58
DDX49-201ENST00000247003 SCN11AQ9UI33 1791 aa18.66■□□□□ 0.58
DDX49-201ENST00000247003 OSBPL3Q9H4L5 887 aa18.65■□□□□ 0.58
DDX49-201ENST00000247003 IBTKQ9P2D0 1353 aaPredicted RBP18.65■□□□□ 0.58
DDX49-201ENST00000247003 SPATA31A3Q5VYP0 1347 aa18.65■□□□□ 0.58
DDX49-201ENST00000247003 PNMA6EA0A0J9YXQ4 647 aa18.65■□□□□ 0.58
DDX49-201ENST00000247003 FRAT2O75474 233 aaPredicted RBP18.65■□□□□ 0.58
DDX49-201ENST00000247003 SDSP20132 328 aa18.65■□□□□ 0.58
DDX49-201ENST00000247003 ANTXR1Q9H6X2 564 aa18.65■□□□□ 0.58
DDX49-201ENST00000247003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.65■□□□□ 0.58
DDX49-201ENST00000247003 PI4KAP2A4QPH2 592 aa18.64■□□□□ 0.57
DDX49-201ENST00000247003 GIGYF1O75420 1035 aaPredicted RBP18.64■□□□□ 0.57
DDX49-201ENST00000247003 PI4KAP1Q8N8J0 262 aa18.64■□□□□ 0.57
DDX49-201ENST00000247003 HSP90AB1P08238 724 aaKnown RBP18.63■□□□□ 0.57
DDX49-201ENST00000247003 PDE1AP54750 535 aa18.63■□□□□ 0.57
DDX49-201ENST00000247003 SPRYD3Q8NCJ5 442 aa18.63■□□□□ 0.57
DDX49-201ENST00000247003 HYPKQ9NX55 129 aa18.63■□□□□ 0.57
DDX49-201ENST00000247003 HDAC5Q9UQL6 1122 aa18.63■□□□□ 0.57
DDX49-201ENST00000247003 HEG1Q9ULI3 1381 aa18.62■□□□□ 0.57
DDX49-201ENST00000247003 MEGF6O75095 1541 aa18.62■□□□□ 0.57
DDX49-201ENST00000247003 REC8O95072 547 aa18.62■□□□□ 0.57
DDX49-201ENST00000247003 BEND3Q5T5X7 828 aa18.62■□□□□ 0.57
DDX49-201ENST00000247003 IFNL2Q8IZJ0 200 aa18.62■□□□□ 0.57
DDX49-201ENST00000247003 CHMP5Q9NZZ3 219 aa18.62■□□□□ 0.57
DDX49-201ENST00000247003 CPDO75976 1380 aa18.62■□□□□ 0.57
DDX49-201ENST00000247003 RAB11FIP3O75154 756 aa18.61■□□□□ 0.57
DDX49-201ENST00000247003 DDX58O95786 925 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms