RNA–Protein interactions for RNA: ENST00000214869.6

TMED1-201, Transcript of transmembrane p24 trafficking protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED1, Length 1,340 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-201ENST00000214869 TOGARAM1Q9Y4F4 1720 aa20.29■□□□□ 0.84
TMED1-201ENST00000214869 ERVV-2B6SEH9 535 aa20.28■□□□□ 0.84
TMED1-201ENST00000214869 ATRNO75882 1429 aa20.28■□□□□ 0.84
TMED1-201ENST00000214869 ALDH1L2Q3SY69 923 aa20.28■□□□□ 0.84
TMED1-201ENST00000214869 MIS18AQ9NYP9 233 aa20.28■□□□□ 0.84
TMED1-201ENST00000214869 THSD7AQ9UPZ6 1657 aa20.28■□□□□ 0.84
TMED1-201ENST00000214869 AFF2P51816 1311 aa20.28■□□□□ 0.84
TMED1-201ENST00000214869 EXOC5O00471 708 aa20.27■□□□□ 0.84
TMED1-201ENST00000214869 BRPF1P55201 1214 aaPredicted RBP20.27■□□□□ 0.84
TMED1-201ENST00000214869 TWISTNBQ3B726 338 aaPredicted RBP20.27■□□□□ 0.84
TMED1-201ENST00000214869 ERICH6BQ5W0A0 696 aa20.27■□□□□ 0.83
TMED1-201ENST00000214869 TSPYL6Q8N831 410 aa20.27■□□□□ 0.83
TMED1-201ENST00000214869 ITGB4P16144 1822 aa20.26■□□□□ 0.83
TMED1-201ENST00000214869 GLI3P10071 1580 aa20.26■□□□□ 0.83
TMED1-201ENST00000214869 BCAR3O75815 825 aa20.26■□□□□ 0.83
TMED1-201ENST00000214869 POTEAQ6S8J7 498 aa20.26■□□□□ 0.83
TMED1-201ENST00000214869 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.26■□□□□ 0.83
TMED1-201ENST00000214869 HEG1Q9ULI3 1381 aa20.25■□□□□ 0.83
TMED1-201ENST00000214869 PAPPAQ13219 1627 aa20.25■□□□□ 0.83
TMED1-201ENST00000214869 BTBD11A6QL63 1104 aa20.25■□□□□ 0.83
TMED1-201ENST00000214869 DDX54Q8TDD1 881 aaKnown RBP20.25■□□□□ 0.83
TMED1-201ENST00000214869 SSH1Q8WYL5 1049 aa20.25■□□□□ 0.83
TMED1-201ENST00000214869 CCDC9Q9Y3X0 531 aaKnown RBP20.25■□□□□ 0.83
TMED1-201ENST00000214869 UBR2Q8IWV8 1755 aa20.24■□□□□ 0.83
TMED1-201ENST00000214869 EIF4A1P60842 406 aaKnown RBP20.24■□□□□ 0.83
TMED1-201ENST00000214869 DDB1Q16531 1140 aa20.24■□□□□ 0.83
TMED1-201ENST00000214869 HOXB7P09629 217 aa20.23■□□□□ 0.83
TMED1-201ENST00000214869 NFATC2IPQ8NCF5 419 aa20.23■□□□□ 0.83
TMED1-201ENST00000214869 TRPC5Q9UL62 973 aaPredicted RBP20.23■□□□□ 0.83
TMED1-201ENST00000214869 ONECUT3O60422 494 aaPredicted RBP20.22■□□□□ 0.83
TMED1-201ENST00000214869 CABP4P57796 275 aa20.22■□□□□ 0.83
TMED1-201ENST00000214869 GJD4Q96KN9 370 aaPredicted RBP20.22■□□□□ 0.83
TMED1-201ENST00000214869 FKBP8Q14318 412 aa20.21■□□□□ 0.83
TMED1-201ENST00000214869 KRT24Q2M2I5 525 aa20.21■□□□□ 0.83
TMED1-201ENST00000214869 CHMP4AQ9BY43 222 aa20.21■□□□□ 0.83
TMED1-201ENST00000214869 SMC4Q9NTJ3 1288 aa20.21■□□□□ 0.83
TMED1-201ENST00000214869 FAM98CQ17RN3 349 aaKnown RBP20.2■□□□□ 0.82
TMED1-201ENST00000214869 ZNF790Q6PG37 636 aa20.2■□□□□ 0.82
TMED1-201ENST00000214869 DOT1LQ8TEK3 1739 aa20.19■□□□□ 0.82
TMED1-201ENST00000214869 ELL2O00472 640 aaPredicted RBP20.19■□□□□ 0.82
TMED1-201ENST00000214869 KCNQ3O43525 872 aa20.19■□□□□ 0.82
TMED1-201ENST00000214869 PDE3AQ14432 1141 aa20.19■□□□□ 0.82
TMED1-201ENST00000214869 MRPL50Q8N5N7 158 aaKnown RBP20.19■□□□□ 0.82
TMED1-201ENST00000214869 KIF16BQ96L93 1317 aa20.19■□□□□ 0.82
TMED1-201ENST00000214869 PLIN1O60240 522 aa20.18■□□□□ 0.82
TMED1-201ENST00000214869 MARCH10Q8NA82 808 aaPredicted RBP20.17■□□□□ 0.82
TMED1-201ENST00000214869 KAT6BQ8WYB5 2073 aa20.17■□□□□ 0.82
TMED1-201ENST00000214869 ARHGAP45Q92619 1136 aa20.16■□□□□ 0.82
TMED1-201ENST00000214869 BCL2L13Q9BXK5 485 aa20.16■□□□□ 0.82
TMED1-201ENST00000214869 BCL9O00512 1426 aa20.16■□□□□ 0.82
TMED1-201ENST00000214869 C5P01031 1676 aa20.15■□□□□ 0.82
TMED1-201ENST00000214869 IPO8O15397 1037 aaKnown RBP20.15■□□□□ 0.82
TMED1-201ENST00000214869 GIGYF1O75420 1035 aaPredicted RBP20.15■□□□□ 0.82
TMED1-201ENST00000214869 IRX6P78412 446 aaPredicted RBP20.15■□□□□ 0.82
TMED1-201ENST00000214869 ZKSCAN2Q63HK3 967 aa20.15■□□□□ 0.82
TMED1-201ENST00000214869 QTRT2Q9H974 415 aaKnown RBP20.15■□□□□ 0.82
TMED1-201ENST00000214869 LAMB4A4D0S4 1761 aa20.15■□□□□ 0.82
TMED1-201ENST00000214869 KCPQ6ZWJ8 1503 aa20.15■□□□□ 0.82
TMED1-201ENST00000214869 MS4A1P11836 297 aa20.14■□□□□ 0.81
TMED1-201ENST00000214869 CCDC30Q5VVM6 783 aa20.14■□□□□ 0.81
TMED1-201ENST00000214869 TMOD3Q9NYL9 352 aa20.14■□□□□ 0.81
TMED1-201ENST00000214869 SLC39A6Q13433 755 aa20.13■□□□□ 0.81
TMED1-201ENST00000214869 ZNF772Q68DY9 489 aaPredicted RBP20.13■□□□□ 0.81
TMED1-201ENST00000214869 C20orf194Q5TEA3 1177 aa20.12■□□□□ 0.81
TMED1-201ENST00000214869 ATF7IPQ6VMQ6 1270 aa20.12■□□□□ 0.81
TMED1-201ENST00000214869 TTC5Q8N0Z6 440 aa20.12■□□□□ 0.81
TMED1-201ENST00000214869 ZNF496Q96IT1 587 aaPredicted RBP20.12■□□□□ 0.81
TMED1-201ENST00000214869 FMNL2Q96PY5 1086 aa20.12■□□□□ 0.81
TMED1-201ENST00000214869 NOB1Q9ULX3 412 aaKnown RBP20.12■□□□□ 0.81
TMED1-201ENST00000214869 CANXP27824 592 aaKnown RBP20.11■□□□□ 0.81
TMED1-201ENST00000214869 PIGBQ92521 554 aa20.11■□□□□ 0.81
TMED1-201ENST00000214869 FRAT1Q92837 279 aaPredicted RBP20.11■□□□□ 0.81
TMED1-201ENST00000214869 HDGFL1Q5TGJ6 251 aa20.1■□□□□ 0.81
TMED1-201ENST00000214869 SBF2Q86WG5 1849 aa20.09■□□□□ 0.81
TMED1-201ENST00000214869 PTPRCP08575 1304 aa20.09■□□□□ 0.81
TMED1-201ENST00000214869 SNRPA1P09661 255 aaKnown RBP20.09■□□□□ 0.81
TMED1-201ENST00000214869 TRIM27P14373 513 aa20.09■□□□□ 0.81
TMED1-201ENST00000214869 STK31Q9BXU1 1019 aa20.09■□□□□ 0.81
TMED1-201ENST00000214869 BRWD3Q6RI45 1802 aa20.09■□□□□ 0.81
TMED1-201ENST00000214869 SLC4A2P04920 1241 aa20.08■□□□□ 0.81
TMED1-201ENST00000214869 NHSQ6T4R5 1651 aa20.08■□□□□ 0.8
TMED1-201ENST00000214869 CICQ96RK0 1608 aaPredicted RBP20.08■□□□□ 0.8
TMED1-201ENST00000214869 TCERG1O14776 1098 aaKnown RBP20.07■□□□□ 0.8
TMED1-201ENST00000214869 PRIM1P49642 420 aaKnown RBP20.07■□□□□ 0.8
TMED1-201ENST00000214869 DZIP1LQ8IYY4 767 aaKnown RBP20.07■□□□□ 0.8
TMED1-201ENST00000214869 CRBNQ96SW2 442 aa20.07■□□□□ 0.8
TMED1-201ENST00000214869 API5Q9BZZ5 524 aaKnown RBP20.07■□□□□ 0.8
TMED1-201ENST00000214869 ATG3Q9NT62 314 aa20.07■□□□□ 0.8
TMED1-201ENST00000214869 N4BP2Q86UW6 1770 aaPredicted RBP20.07■□□□□ 0.8
TMED1-201ENST00000214869 RBM6P78332 1123 aaKnown RBP20.06■□□□□ 0.8
TMED1-201ENST00000214869 SEPT12Q8IYM1 358 aa20.06■□□□□ 0.8
TMED1-201ENST00000214869 VSIG10Q8N0Z9 540 aa20.06■□□□□ 0.8
TMED1-201ENST00000214869 EXOC6Q8TAG9 804 aa20.06■□□□□ 0.8
TMED1-201ENST00000214869 PPP4R2Q9NY27 417 aa20.06■□□□□ 0.8
TMED1-201ENST00000214869 ZNF831Q5JPB2 1677 aa20.06■□□□□ 0.8
TMED1-201ENST00000214869 RGS12O14924 1447 aa20.06■□□□□ 0.8
TMED1-201ENST00000214869 RLBP1P12271 317 aa20.05■□□□□ 0.8
TMED1-201ENST00000214869 PANK1Q8TE04 598 aa20.05■□□□□ 0.8
TMED1-201ENST00000214869 DBF4Q9UBU7 674 aaPredicted RBP20.05■□□□□ 0.8
TMED1-201ENST00000214869 ABCC4O15439 1325 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms