RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 TRIM5Q9C035 493 aa13.43□□□□□ -0.26
ACTN1-201ENST00000193403 PLXNC1O60486 1568 aa13.43□□□□□ -0.26
ACTN1-201ENST00000193403 ATP7AQ04656 1500 aa13.43□□□□□ -0.26
ACTN1-201ENST00000193403 MCM5P33992 734 aa13.43□□□□□ -0.26
ACTN1-201ENST00000193403 HSPA2P54652 639 aa13.43□□□□□ -0.26
ACTN1-201ENST00000193403 CCDC183Q5T5S1 534 aa13.43□□□□□ -0.26
ACTN1-201ENST00000193403 IQGAP1P46940 1657 aa13.42□□□□□ -0.26
ACTN1-201ENST00000193403 CEBPZQ03701 1054 aaKnown RBP13.42□□□□□ -0.26
ACTN1-201ENST00000193403 STK3Q13188 491 aa13.42□□□□□ -0.26
ACTN1-201ENST00000193403 C16orf45Q96MC5 204 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-201ENST00000193403 CASTP20810 708 aaKnown RBP13.42□□□□□ -0.26
ACTN1-201ENST00000193403 POGZQ7Z3K3 1410 aa13.41□□□□□ -0.26
ACTN1-201ENST00000193403 MAPK8IP2Q13387 824 aaPredicted RBP13.41□□□□□ -0.26
ACTN1-201ENST00000193403 TCEANC2Q96MN5 208 aa13.41□□□□□ -0.26
ACTN1-201ENST00000193403 SRCIN1Q9C0H9 1055 aa13.41□□□□□ -0.26
ACTN1-201ENST00000193403 RNF17Q9BXT8 1623 aaKnown RBP13.41□□□□□ -0.26
ACTN1-201ENST00000193403 HSP90B1P14625 803 aaKnown RBP13.41□□□□□ -0.26
ACTN1-201ENST00000193403 JAKMIP1Q96N16 626 aaKnown RBP13.41□□□□□ -0.26
ACTN1-201ENST00000193403 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-201ENST00000193403 ABCA6Q8N139 1617 aa13.4□□□□□ -0.26
ACTN1-201ENST00000193403 GNAI3P08754 354 aa13.4□□□□□ -0.26
ACTN1-201ENST00000193403 CCT4P50991 539 aaKnown RBP13.4□□□□□ -0.26
ACTN1-201ENST00000193403 DNM1Q05193 864 aaKnown RBP13.4□□□□□ -0.26
ACTN1-201ENST00000193403 AIMP1Q12904 312 aaKnown RBP13.4□□□□□ -0.26
ACTN1-201ENST00000193403 HSP90AB2PQ58FF8 381 aa13.4□□□□□ -0.26
ACTN1-201ENST00000193403 BRD1O95696 1058 aa13.4□□□□□ -0.27
ACTN1-201ENST00000193403 CDK11BP21127 795 aaKnown RBP13.4□□□□□ -0.27
ACTN1-201ENST00000193403 ZRSR1Q15695 479 aaKnown RBP13.4□□□□□ -0.27
ACTN1-201ENST00000193403 NECAB1Q8N987 351 aa13.4□□□□□ -0.27
ACTN1-201ENST00000193403 FAM184AQ8NB25 1140 aa13.4□□□□□ -0.27
ACTN1-201ENST00000193403 STX6O43752 255 aa13.39□□□□□ -0.27
ACTN1-201ENST00000193403 FAM173BQ6P4H8 233 aa13.39□□□□□ -0.27
ACTN1-201ENST00000193403 CCDC94Q9BW85 323 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-201ENST00000193403 SRGAP3O43295 1099 aa13.39□□□□□ -0.27
ACTN1-201ENST00000193403 NUDT16Q96DE0 195 aaKnown RBP13.39□□□□□ -0.27
ACTN1-201ENST00000193403 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.39□□□□□ -0.27
ACTN1-201ENST00000193403 TFIP11Q9UBB9 837 aaKnown RBP13.39□□□□□ -0.27
ACTN1-201ENST00000193403 ABCC1P33527 1531 aa13.39□□□□□ -0.27
ACTN1-201ENST00000193403 CEP152O94986 1710 aa13.39□□□□□ -0.27
ACTN1-201ENST00000193403 IL13P35225 146 aa13.39□□□□□ -0.27
ACTN1-201ENST00000193403 PDLIM2Q96JY6 352 aa13.39□□□□□ -0.27
ACTN1-201ENST00000193403 PNMA6EA0A0J9YXQ4 647 aa13.38□□□□□ -0.27
ACTN1-201ENST00000193403 CHMLP26374 656 aa13.38□□□□□ -0.27
ACTN1-201ENST00000193403 TPD52L1Q16890 204 aaPredicted RBP13.38□□□□□ -0.27
ACTN1-201ENST00000193403 PRPF40BQ6NWY9 871 aaKnown RBP13.38□□□□□ -0.27
ACTN1-201ENST00000193403 IBTKQ9P2D0 1353 aaPredicted RBP13.38□□□□□ -0.27
ACTN1-201ENST00000193403 CCDC192P0DO97 292 aa13.38□□□□□ -0.27
ACTN1-201ENST00000193403 UNC5CLQ8IV45 518 aa13.38□□□□□ -0.27
ACTN1-201ENST00000193403 MAP3K4Q9Y6R4 1608 aa13.38□□□□□ -0.27
ACTN1-201ENST00000193403 MYOM1P52179 1685 aa13.38□□□□□ -0.27
ACTN1-201ENST00000193403 NPATQ14207 1427 aa13.38□□□□□ -0.27
ACTN1-201ENST00000193403 PPFIA3O75145 1194 aa13.37□□□□□ -0.27
ACTN1-201ENST00000193403 U2AF2P26368 475 aaKnown RBP eCLIP13.37□□□□□ -0.271e-13■■■□□ 15
ACTN1-201ENST00000193403 LARP1BQ659C4 914 aaKnown RBP13.37□□□□□ -0.27
ACTN1-201ENST00000193403 GOLGA6L19H0YKK7 550 aa13.37□□□□□ -0.27
ACTN1-201ENST00000193403 CYP2E1P05181 493 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-201ENST00000193403 ZKSCAN1P17029 563 aaPredicted RBP13.37□□□□□ -0.27
ACTN1-201ENST00000193403 CNTROBQ8N137 903 aa13.37□□□□□ -0.27
ACTN1-201ENST00000193403 MYRIPQ8NFW9 859 aa13.37□□□□□ -0.27
ACTN1-201ENST00000193403 SLC52A1Q9NWF4 448 aa13.37□□□□□ -0.27
ACTN1-201ENST00000193403 GJB2P29033 226 aa13.36□□□□□ -0.27
ACTN1-201ENST00000193403 NLRP6P59044 892 aa13.36□□□□□ -0.27
ACTN1-201ENST00000193403 FLIIQ13045 1269 aa13.36□□□□□ -0.27
ACTN1-201ENST00000193403 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.36□□□□□ -0.272e-6■■■□□ 15.7
ACTN1-201ENST00000193403 V9GYY5 206 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-201ENST00000193403 RIMS2Q9UQ26 1411 aa13.36□□□□□ -0.27
ACTN1-201ENST00000193403 MYOM2P54296 1465 aa13.36□□□□□ -0.27
ACTN1-201ENST00000193403 ANXA1P04083 346 aa13.36□□□□□ -0.27
ACTN1-201ENST00000193403 ZSCAN22P10073 491 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-201ENST00000193403 TERF1P54274 439 aa13.36□□□□□ -0.27
ACTN1-201ENST00000193403 AK2P54819 239 aa13.36□□□□□ -0.27
ACTN1-201ENST00000193403 RTL1A6NKG5 1358 aa13.36□□□□□ -0.27
ACTN1-201ENST00000193403 VIRMAQ69YN4 1812 aaKnown RBP13.36□□□□□ -0.27
ACTN1-201ENST00000193403 SPHKAPQ2M3C7 1700 aa13.36□□□□□ -0.27
ACTN1-201ENST00000193403 BECN2A8MW95 431 aa13.36□□□□□ -0.27
ACTN1-201ENST00000193403 IFIT2P09913 472 aaKnown RBP13.36□□□□□ -0.27
ACTN1-201ENST00000193403 PTGS1P23219 599 aa13.36□□□□□ -0.27
ACTN1-201ENST00000193403 TNMDQ9H2S6 317 aa13.36□□□□□ -0.27
ACTN1-201ENST00000193403 H3BQV1 296 aa13.35□□□□□ -0.27
ACTN1-201ENST00000193403 SYT1P21579 422 aa13.35□□□□□ -0.27
ACTN1-201ENST00000193403 EIF4A2Q14240 407 aaKnown RBP13.35□□□□□ -0.27
ACTN1-201ENST00000193403 IFFO2Q5TF58 517 aa13.35□□□□□ -0.27
ACTN1-201ENST00000193403 HDGFL1Q5TGJ6 251 aa13.35□□□□□ -0.27
ACTN1-201ENST00000193403 PIBF1Q8WXW3 757 aa13.35□□□□□ -0.27
ACTN1-201ENST00000193403 PDRG1Q9NUG6 133 aa13.35□□□□□ -0.27
ACTN1-201ENST00000193403 KDM4AO75164 1064 aa13.35□□□□□ -0.27
ACTN1-201ENST00000193403 PRIMPOLQ96LW4 560 aa13.35□□□□□ -0.27
ACTN1-201ENST00000193403 NUP62CLQ9H1M0 184 aa13.35□□□□□ -0.27
ACTN1-201ENST00000193403 HDGFP51858 240 aaKnown RBP13.35□□□□□ -0.27
ACTN1-201ENST00000193403 UBE2HP62256 183 aa13.35□□□□□ -0.27
ACTN1-201ENST00000193403 CCDC30Q5VVM6 783 aa13.35□□□□□ -0.27
ACTN1-201ENST00000193403 FILIP1Q7Z7B0 1213 aa13.35□□□□□ -0.27
ACTN1-201ENST00000193403 USHBP1Q8N6Y0 703 aa13.35□□□□□ -0.27
ACTN1-201ENST00000193403 RIOK3O14730 519 aaKnown RBP13.34□□□□□ -0.27
ACTN1-201ENST00000193403 BCL2L12Q9HB09 334 aa13.34□□□□□ -0.27
ACTN1-201ENST00000193403 C9orf78Q9NZ63 289 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-201ENST00000193403 LIMCH1Q9UPQ0 1083 aa13.34□□□□□ -0.27
ACTN1-201ENST00000193403 PTPRCP08575 1304 aa13.34□□□□□ -0.27
ACTN1-201ENST00000193403 LETM1O95202 739 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-201ENST00000193403 NCBP3Q53F19 620 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms