RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 DDIT3P35638 169 aa20.61■□□□□ 0.89
PTPN18-201ENST00000175756 CAMK4Q16566 473 aa20.61■□□□□ 0.89
PTPN18-201ENST00000175756 CNTROBQ8N137 903 aa20.61■□□□□ 0.89
PTPN18-201ENST00000175756 GIMAP6Q6P9H5 292 aa20.61■□□□□ 0.89
PTPN18-201ENST00000175756 JAKMIP1Q96N16 626 aaKnown RBP20.61■□□□□ 0.89
PTPN18-201ENST00000175756 ZNF592Q92610 1267 aa20.6■□□□□ 0.89
PTPN18-201ENST00000175756 CHL1O00533 1208 aa20.6■□□□□ 0.89
PTPN18-201ENST00000175756 ZKSCAN1P17029 563 aaPredicted RBP20.6■□□□□ 0.89
PTPN18-201ENST00000175756 SHROOM2Q13796 1616 aa20.6■□□□□ 0.89
PTPN18-201ENST00000175756 EFCAB6Q5THR3 1501 aa20.6■□□□□ 0.89
PTPN18-201ENST00000175756 SRCIN1Q9C0H9 1055 aa20.6■□□□□ 0.89
PTPN18-201ENST00000175756 ZNF853P0CG23 659 aa20.59■□□□□ 0.89
PTPN18-201ENST00000175756 CHMLP26374 656 aa20.59■□□□□ 0.89
PTPN18-201ENST00000175756 NOL7Q9UMY1 257 aaKnown RBP20.59■□□□□ 0.89
PTPN18-201ENST00000175756 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.59■□□□□ 0.89
PTPN18-201ENST00000175756 PPP1R42Q7Z4L9 355 aa20.59■□□□□ 0.89
PTPN18-201ENST00000175756 SIL1Q9H173 461 aa20.59■□□□□ 0.89
PTPN18-201ENST00000175756 ADCY5O95622 1261 aa20.59■□□□□ 0.89
PTPN18-201ENST00000175756 GPATCH3Q96I76 525 aa20.59■□□□□ 0.89
PTPN18-201ENST00000175756 TCEANC2Q96MN5 208 aa20.59■□□□□ 0.89
PTPN18-201ENST00000175756 RTL1A6NKG5 1358 aa20.59■□□□□ 0.89
PTPN18-201ENST00000175756 PRPF40BQ6NWY9 871 aaKnown RBP20.58■□□□□ 0.89
PTPN18-201ENST00000175756 POGZQ7Z3K3 1410 aa20.58■□□□□ 0.89
PTPN18-201ENST00000175756 CLASRPQ8N2M8 674 aaKnown RBP20.58■□□□□ 0.89
PTPN18-201ENST00000175756 ZFYVE9O95405 1425 aa20.58■□□□□ 0.89
PTPN18-201ENST00000175756 CEBPZQ03701 1054 aaKnown RBP20.58■□□□□ 0.89
PTPN18-201ENST00000175756 AK9Q5TCS8 1911 aa20.58■□□□□ 0.88
PTPN18-201ENST00000175756 TAF7Q15545 349 aaPredicted RBP20.57■□□□□ 0.88
PTPN18-201ENST00000175756 UNC5CLQ8IV45 518 aa20.57■□□□□ 0.88
PTPN18-201ENST00000175756 ABTB2Q8N961 1025 aa20.57■□□□□ 0.88
PTPN18-201ENST00000175756 QRICH2Q9H0J4 1663 aa20.57■□□□□ 0.88
PTPN18-201ENST00000175756 TULP4Q9NRJ4 1543 aa20.57■□□□□ 0.88
PTPN18-201ENST00000175756 BICD2Q8TD16 824 aa20.57■□□□□ 0.88
PTPN18-201ENST00000175756 RUFY2Q8WXA3 655 aa20.57■□□□□ 0.88
PTPN18-201ENST00000175756 ZDHHC9Q9Y397 364 aa20.57■□□□□ 0.88
PTPN18-201ENST00000175756 TTC21BQ7Z4L5 1316 aa20.56■□□□□ 0.88
PTPN18-201ENST00000175756 ZRSR1Q15695 479 aaKnown RBP20.56■□□□□ 0.88
PTPN18-201ENST00000175756 NECAB1Q8N987 351 aa20.56■□□□□ 0.88
PTPN18-201ENST00000175756 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.56■□□□□ 0.885e-6■■□□□ 13.3
PTPN18-201ENST00000175756 BRPF1P55201 1214 aaPredicted RBP20.56■□□□□ 0.88
PTPN18-201ENST00000175756 RBM33Q96EV2 1170 aaKnown RBP20.56■□□□□ 0.88
PTPN18-201ENST00000175756 GOLGA6L6A8MZA4 724 aa20.55■□□□□ 0.88
PTPN18-201ENST00000175756 GNAT3A8MTJ3 354 aa20.55■□□□□ 0.88
PTPN18-201ENST00000175756 PHAXQ9H814 394 aaKnown RBP20.55■□□□□ 0.88
PTPN18-201ENST00000175756 SASS6Q6UVJ0 657 aa20.55■□□□□ 0.88
PTPN18-201ENST00000175756 EID1Q9Y6B2 187 aa20.55■□□□□ 0.88
PTPN18-201ENST00000175756 LARP1BQ659C4 914 aaKnown RBP20.54■□□□□ 0.88
PTPN18-201ENST00000175756 PDRG1Q9NUG6 133 aa20.54■□□□□ 0.88
PTPN18-201ENST00000175756 TFIP11Q9UBB9 837 aaKnown RBP20.54■□□□□ 0.88
PTPN18-201ENST00000175756 STX6O43752 255 aa20.54■□□□□ 0.88
PTPN18-201ENST00000175756 CKAP2LQ8IYA6 745 aa20.54■□□□□ 0.88
PTPN18-201ENST00000175756 ATP8B2P98198 1209 aa20.53■□□□□ 0.88
PTPN18-201ENST00000175756 H3BQV1 296 aa20.53■□□□□ 0.88
PTPN18-201ENST00000175756 IFFO2Q5TF58 517 aa20.53■□□□□ 0.88
PTPN18-201ENST00000175756 MAP7D2Q96T17 732 aa20.53■□□□□ 0.88
PTPN18-201ENST00000175756 CYP46A1Q9Y6A2 500 aa20.53■□□□□ 0.88
PTPN18-201ENST00000175756 FAM135BQ49AJ0 1406 aa20.52■□□□□ 0.88
PTPN18-201ENST00000175756 CCDC183Q5T5S1 534 aa20.52■□□□□ 0.88
PTPN18-201ENST00000175756 PPFIA3O75145 1194 aa20.52■□□□□ 0.88
PTPN18-201ENST00000175756 CBX1P83916 185 aa20.52■□□□□ 0.88
PTPN18-201ENST00000175756 TRIM5Q9C035 493 aa20.52■□□□□ 0.88
PTPN18-201ENST00000175756 LIMCH1Q9UPQ0 1083 aa20.52■□□□□ 0.88
PTPN18-201ENST00000175756 DNM1Q05193 864 aaKnown RBP20.51■□□□□ 0.87
PTPN18-201ENST00000175756 RHPN1Q8TCX5 695 aa20.51■□□□□ 0.87
PTPN18-201ENST00000175756 PI4KAP2A4QPH2 592 aa20.51■□□□□ 0.87
PTPN18-201ENST00000175756 AK2P54819 239 aa20.51■□□□□ 0.87
PTPN18-201ENST00000175756 G3BP1Q13283 466 aaKnown RBP eCLIP20.51■□□□□ 0.87
PTPN18-201ENST00000175756 PI4KAP1Q8N8J0 262 aa20.51■□□□□ 0.87
PTPN18-201ENST00000175756 FSD1Q9BTV5 496 aa20.51■□□□□ 0.87
PTPN18-201ENST00000175756 BRD1O95696 1058 aa20.51■□□□□ 0.87
PTPN18-201ENST00000175756 FAM173BQ6P4H8 233 aa20.51■□□□□ 0.87
PTPN18-201ENST00000175756 AACSQ86V21 672 aa20.51■□□□□ 0.87
PTPN18-201ENST00000175756 EYA1Q99502 592 aa20.51■□□□□ 0.87
PTPN18-201ENST00000175756 GLI2P10070 1586 aa20.51■□□□□ 0.87
PTPN18-201ENST00000175756 GJB2P29033 226 aa20.5■□□□□ 0.87
PTPN18-201ENST00000175756 MAP3K19Q56UN5 1328 aa20.5■□□□□ 0.87
PTPN18-201ENST00000175756 KIF1BPQ96EK5 621 aa20.5■□□□□ 0.87
PTPN18-201ENST00000175756 UHRF1BP1LA0JNW5 1464 aa20.49■□□□□ 0.87
PTPN18-201ENST00000175756 JARID2Q92833 1246 aaPredicted RBP20.49■□□□□ 0.87
PTPN18-201ENST00000175756 CCDC8Q9H0W5 538 aaPredicted RBP20.49■□□□□ 0.87
PTPN18-201ENST00000175756 PPRC1Q5VV67 1664 aaKnown RBP20.49■□□□□ 0.87
PTPN18-201ENST00000175756 PTCH1Q13635 1447 aa20.49■□□□□ 0.87
PTPN18-201ENST00000175756 ZSCAN22P10073 491 aaPredicted RBP20.49■□□□□ 0.87
PTPN18-201ENST00000175756 FAM184AQ8NB25 1140 aa20.49■□□□□ 0.87
PTPN18-201ENST00000175756 LRRC7Q96NW7 1537 aa20.48■□□□□ 0.87
PTPN18-201ENST00000175756 SYT1P21579 422 aa20.48■□□□□ 0.87
PTPN18-201ENST00000175756 NOLC1Q14978 699 aaKnown RBP eCLIP20.48■□□□□ 0.87
PTPN18-201ENST00000175756 YEATS2Q9ULM3 1422 aa20.48■□□□□ 0.87
PTPN18-201ENST00000175756 NCOA3Q9Y6Q9 1424 aa20.48■□□□□ 0.87
PTPN18-201ENST00000175756 ZHX1Q9UKY1 873 aaPredicted RBP20.48■□□□□ 0.87
PTPN18-201ENST00000175756 HS1BP3Q53T59 392 aa20.48■□□□□ 0.87
PTPN18-201ENST00000175756 BOLA2Q9H3K6 86 aa20.48■□□□□ 0.87
PTPN18-201ENST00000175756 PA2G4Q9UQ80 394 aaKnown RBP20.48■□□□□ 0.87
PTPN18-201ENST00000175756 CEBPAP49715 358 aaPredicted RBP20.47■□□□□ 0.87
PTPN18-201ENST00000175756 ADGRB3O60242 1522 aa20.47■□□□□ 0.87
PTPN18-201ENST00000175756 PNPLA6Q8IY17 1366 aa20.47■□□□□ 0.87
PTPN18-201ENST00000175756 CCDC192P0DO97 292 aa20.47■□□□□ 0.87
PTPN18-201ENST00000175756 HSP90AB4PQ58FF6 505 aa20.47■□□□□ 0.87
PTPN18-201ENST00000175756 DDX11Q96FC9 970 aa20.47■□□□□ 0.87
PTPN18-201ENST00000175756 SPDYE4A6NLX3 237 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms