RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 GckrQ91X44 587 aa19.66■□□□□ 0.74
Ubp1-206ENSMUST00000216558 Speer4bQ9D9F7 267 aa19.66■□□□□ 0.74
Ubp1-206ENSMUST00000216558 Taf7Q9R1C0 341 aa19.66■□□□□ 0.74
Ubp1-206ENSMUST00000216558 Akap11E9Q777 1895 aa19.66■□□□□ 0.74
Ubp1-206ENSMUST00000216558 Qtrt2B8ZXI1 415 aa19.65■□□□□ 0.74
Ubp1-206ENSMUST00000216558 Cluap1Q8R3P7 413 aa19.65■□□□□ 0.74
Ubp1-206ENSMUST00000216558 Tm6sf1P58749 370 aa19.65■□□□□ 0.74
Ubp1-206ENSMUST00000216558 Iqsec3Q3TES0 1195 aa19.64■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Larp1Q6ZQ58 1072 aaKnown RBP19.64■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Slc5a1Q8C3K6 665 aa19.64■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Ddx54Q8K4L0 874 aaKnown RBP19.64■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Armcx1Q9CX83 456 aa19.64■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Cyp2d11P24457 504 aa19.63■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Morc2aQ69ZX6 1030 aa19.63■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Echdc1Q9D9V3 322 aa19.63■□□□□ 0.73
Ubp1-206ENSMUST00000216558 PappaQ8R4K8 1624 aa19.63■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Fkbp4P30416 458 aa19.62■□□□□ 0.73
Ubp1-206ENSMUST00000216558 SkilQ60665 675 aa19.62■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Gm21663A0A0G2JE01 267 aa19.62■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Gm21680A0A0G2JGR8 267 aa19.62■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Fam71e1A1L3C1 212 aa19.62■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Gm7361D3Z6R1 267 aa19.62■□□□□ 0.73
Ubp1-206ENSMUST00000216558 5031410I06RikE9Q4E0 267 aa19.62■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Gm1979E9QAN3 267 aa19.62■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Gm5862K7N5V5 267 aa19.62■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Gm10220K7N660 267 aa19.62■□□□□ 0.73
Ubp1-206ENSMUST00000216558 HnrnpuQ8VEK3 800 aaKnown RBP19.62■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Hspa1lP16627 641 aa19.61■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Irx6Q9ER75 438 aa19.61■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Kat6bQ8BRB7 1872 aa19.6■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Kcnh4A2A5F7 1018 aa19.6■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Prkar2bP31324 416 aa19.6■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Pdia6Q922R8 440 aaKnown RBP19.6■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Atg3Q9CPX6 314 aa19.6■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Ppp2r3aB2RXC8 1150 aa19.58■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Fgd1P52734 960 aa19.58■□□□□ 0.73
Ubp1-206ENSMUST00000216558 Trim27Q62158 513 aa19.58■□□□□ 0.73
Ubp1-206ENSMUST00000216558 SympkQ80X82 1284 aa19.58■□□□□ 0.73
Ubp1-206ENSMUST00000216558 TefQ9JLC6 301 aa19.58■□□□□ 0.73
Ubp1-206ENSMUST00000216558 LifrP42703 1092 aa19.58■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Tiam2Q6ZPF3 1715 aa19.57■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Flt4P35917 1363 aa19.57■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Stk36Q69ZM6 1316 aa19.57■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Egfem1Q8C088 590 aa19.57■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Triml2E9PW10 424 aa19.56■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Ints5Q8CHT3 1018 aa19.56■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Adcy9P51830 1353 aa19.56■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Mst1rQ62190 1378 aa19.56■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Tjp1P39447 1745 aaKnown RBP19.56■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Gnai2P08752 355 aaKnown RBP19.55■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Fam13aQ8BGI4 693 aa19.55■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Brd1E9PZ26 1189 aaKnown RBP19.54■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Cetn4Q8K4K1 168 aa19.54■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Elp1Q7TT37 1333 aaKnown RBP19.54■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Phlpp2Q8BXA7 1320 aa19.54■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Bcl2l13P59017 434 aa19.54■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Bend3Q6PAL0 825 aa19.54■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Efcab2Q9CQ46 164 aa19.54■□□□□ 0.72
Ubp1-206ENSMUST00000216558 AceP09470 1312 aa19.53■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Ginm1Q91WR6 327 aa19.53■□□□□ 0.72
Ubp1-206ENSMUST00000216558 CarsQ9ER72 831 aaKnown RBP19.53■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Fer1l6E0CZ42 1862 aa19.53■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Shank3Q4ACU6 1730 aa19.53■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Map7O88735 730 aa19.52■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Cnnm1Q0GA42 951 aa19.52■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Irf9Q61179 399 aa19.52■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Aldh8a1Q8BH00 487 aa19.52■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Slc5a4bQ91ZP4 660 aa19.52■□□□□ 0.72
Ubp1-206ENSMUST00000216558 PigbQ9JJQ0 542 aa19.52■□□□□ 0.72
Ubp1-206ENSMUST00000216558 ScaperF8VQ70 1398 aaKnown RBP19.52■□□□□ 0.72
Ubp1-206ENSMUST00000216558 Crb1Q8VHS2 1405 aa19.52■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Shank2Q80Z38 1476 aa19.51■□□□□ 0.71
Ubp1-206ENSMUST00000216558 HellsQ60848 821 aa19.51■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Eif4g2Q62448 906 aaKnown RBP19.51■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Cgnl1Q6AW69 1298 aa19.51■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Flad1Q8R123 492 aa19.51■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Sik1Q60670 779 aa19.5■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Pm20d1Q8C165 503 aa19.5■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Lrp6O88572 1613 aa19.5■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Map3k2Q61083 619 aa19.49■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Prkab2Q6PAM0 271 aa19.49■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Kif18aQ91WD7 886 aa19.49■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Atp8b2P98199 1209 aa19.48■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Ccdc183A2AJB1 534 aa19.47■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Exoc6bA6H5Z3 810 aa19.47■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Pnmal2G3X9N3 661 aa19.47■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Ccdc129Q14B48 1034 aa19.47■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Gcc1Q9D4H2 778 aa19.47■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Erbb4Q61527 1308 aa19.47■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Mast2Q60592 1734 aa19.47■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Trim30dE9PWL0 497 aa19.47■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Vps33bP59016 617 aa19.47■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Cers3Q1A3B0 383 aa19.47■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Zap70P43404 618 aa19.46■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Ankrd23Q812A3 306 aa19.46■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Tmc1Q8R4P5 757 aa19.46■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Sart3Q9JLI8 962 aaKnown RBP19.46■□□□□ 0.71
Ubp1-206ENSMUST00000216558 Cacna1sQ02789 1880 aa19.45■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Igfbp6P47880 238 aa19.45■□□□□ 0.7
Ubp1-206ENSMUST00000216558 Mcm2P97310 904 aa19.45■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 88.1 ms