RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Ctnnbl1Q9CWL8 563 aaKnown RBP13.69□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Naip1Q9QWK5 1403 aa13.69□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Ccdc158Q8CDI6 1109 aa13.69□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Polr3dQ91WD1 398 aa13.69□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Rnf216P58283 853 aa13.69□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Plekhg5Q66T02 1073 aa13.69□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Aldh1l1Q8R0Y6 902 aa13.69□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Gm7298A0A0N4SVU1 1476 aa13.69□□□□□ -0.22
Scn8a-208ENSMUST00000200963 TnikP83510 1323 aa13.69□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Mcm3P25206 812 aaKnown RBP13.69□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Rad23bP54728 416 aa13.69□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Tbc1d7Q9D0K0 293 aa13.69□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Bag3Q9JLV1 577 aaKnown RBP13.69□□□□□ -0.22
Scn8a-208ENSMUST00000200963 ScaperF8VQ70 1398 aaKnown RBP13.69□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Mum1Q6DID5 682 aa13.68□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Matr3Q8K310 846 aaKnown RBP13.68□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Ppp1r42Q8R1Z4 357 aa13.68□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Elp1Q7TT37 1333 aaKnown RBP13.68□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Pdia4P08003 638 aaKnown RBP13.68□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Arglu1Q3UL36 271 aaKnown RBP13.68□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Tmem67Q8BR76 992 aa13.68□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Cetn1P41209 172 aa13.68□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Znf653Q6YND2 615 aa13.68□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Lman1Q9D0F3 517 aa13.68□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Sos1Q62245 1319 aa13.68□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Ccdc112A0AUP1 442 aa13.68□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Cavin1O54724 392 aa13.68□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Cul5Q9D5V5 780 aa13.68□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Gm18336A0A140LIU8 765 aa13.67□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Gtf2a1Q99PM3 378 aa13.67□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Exoc8Q6PGF7 716 aa13.67□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Smtnl1Q99LM3 459 aa13.67□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Slc7a3P70423 618 aa13.66□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Cdan1Q8CC12 1239 aa13.66□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Kcnh5Q920E3 988 aa13.66□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Ppp1r15aP17564 657 aa13.66□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Uri1Q3TLD5 531 aa13.66□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Gm42641I6L9G2 585 aa13.66□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Ccdc191J3QQ27 883 aa13.66□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Cbx1P83917 185 aaKnown RBP13.66□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Cep120Q7TSG1 988 aa13.66□□□□□ -0.22
Scn8a-208ENSMUST00000200963 AtripQ8BMG1 785 aa13.66□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Cct2P80314 535 aaKnown RBP13.66□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Ccdc150Q8CDI7 1110 aa13.66□□□□□ -0.22
Scn8a-208ENSMUST00000200963 NinlQ6ZQ12 1394 aa13.66□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Nap1l2P51860 460 aa13.65□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Mex3cQ05A36 652 aaKnown RBP13.65□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Traf3ip1Q149C2 625 aa13.65□□□□□ -0.22
Scn8a-208ENSMUST00000200963 PrxO55103 1391 aa13.65□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Ddx10Q80Y44 875 aaKnown RBP13.65□□□□□ -0.22
Scn8a-208ENSMUST00000200963 GphnQ8BUV3 769 aaKnown RBP13.65□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Slc5a1Q8C3K6 665 aa13.65□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Arhgef5E9Q7D5 1581 aa13.65□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Spata24Q6P926 205 aa13.65□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Nop53Q8BK35 484 aaKnown RBP13.65□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Frat2Q8K025 231 aa13.65□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Klc3Q91W40 508 aa13.65□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Jakmip3Q5DTN8 844 aa13.65□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Maats1Q8BRC6 783 aa13.65□□□□□ -0.22
Scn8a-208ENSMUST00000200963 Abcf1Q6P542 837 aaKnown RBP13.65□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Ccdc155Q80VJ8 648 aa13.65□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Psmd1Q3TXS7 953 aa13.64□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Prkar2bP31324 416 aa13.64□□□□□ -0.23
Scn8a-208ENSMUST00000200963 ImpactO55091 318 aa13.64□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Zbtb21E9Q444 1094 aa13.63□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Map4k4P97820 1233 aaKnown RBP13.63□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Hspa4Q61316 841 aa13.63□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Acsbg1Q99PU5 721 aa13.63□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Atxn3Q9CVD2 355 aa13.63□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Rcan3Q9JKK0 239 aa13.63□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Limch1Q3UH68 1057 aa13.63□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Q3UJC8 639 aa13.63□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Bcar3Q9QZK2 820 aa13.63□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Zfp42P22227 288 aa13.63□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Ctnna2Q61301 953 aa13.63□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Erlin1Q91X78 346 aa13.63□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Slc52a2Q9D8F3 450 aa13.63□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Hvcn1Q3U2S8 269 aa13.63□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Ddx19aQ61655 478 aaKnown RBP13.63□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Bin1O08539 588 aaKnown RBP13.62□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Rnf41Q8BH75 317 aa13.62□□□□□ -0.23
Scn8a-208ENSMUST00000200963 NsmfQ99NF2 532 aa13.62□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Smc1aQ9CU62 1233 aaKnown RBP13.62□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Duox2A2AQ99 1517 aa13.62□□□□□ -0.23
Scn8a-208ENSMUST00000200963 NcapgE9PWG6 1004 aa13.62□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Bag4Q8CI61 457 aa13.62□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Klhl10Q9D5V2 608 aa13.62□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Il1rapl2Q9ERS6 686 aa13.62□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Gjc1P28229 396 aa13.61□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Sdc2P43407 202 aa13.61□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Nf2P46662 596 aa13.61□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Skor1Q8BX46 964 aa13.61□□□□□ -0.23
Scn8a-208ENSMUST00000200963 StambpQ9CQ26 424 aa13.61□□□□□ -0.23
Scn8a-208ENSMUST00000200963 SlmapQ3URD3 845 aa13.61□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Ncapd3Q6ZQK0 1506 aa13.61□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Fgd6Q69ZL1 1399 aa13.61□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Tbc1d2bQ3U0J8 965 aa13.61□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Spg7Q3ULF4 781 aa13.61□□□□□ -0.23
Scn8a-208ENSMUST00000200963 Znf697Q569E7 569 aa13.61□□□□□ -0.23
Scn8a-208ENSMUST00000200963 L1td1Q587J6 782 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms