RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Cetn4Q8K4K1 168 aa22.78■■□□□ 1.24
Trim47-202ENSMUST00000106441 Aldh1l1Q8R0Y6 902 aa22.78■■□□□ 1.24
Trim47-202ENSMUST00000106441 Psrc1Q9D0P7 329 aa22.78■■□□□ 1.24
Trim47-202ENSMUST00000106441 Larp1bA0A0A6YXJ7 370 aaKnown RBP22.77■■□□□ 1.24
Trim47-202ENSMUST00000106441 Fnbp4Q6ZQ03 1031 aa22.77■■□□□ 1.24
Trim47-202ENSMUST00000106441 Catsper2A2ARP9 588 aa22.76■■□□□ 1.23
Trim47-202ENSMUST00000106441 Znf330Q922H9 316 aa22.76■■□□□ 1.23
Trim47-202ENSMUST00000106441 MvpQ9EQK5 861 aa22.76■■□□□ 1.23
Trim47-202ENSMUST00000106441 Ahnak2E9PYB0 1738 aaKnown RBP22.76■■□□□ 1.23
Trim47-202ENSMUST00000106441 Trpm3Q5F4S9 1721 aa22.75■■□□□ 1.23
Trim47-202ENSMUST00000106441 Plekhm2Q80TQ5 1018 aa22.74■■□□□ 1.23
Trim47-202ENSMUST00000106441 Eno4Q8C042 619 aa22.74■■□□□ 1.23
Trim47-202ENSMUST00000106441 Cog6Q8R3I3 657 aa22.74■■□□□ 1.23
Trim47-202ENSMUST00000106441 Q3UPC7 1272 aa22.74■■□□□ 1.23
Trim47-202ENSMUST00000106441 TmpoQ61033 693 aaKnown RBP22.74■■□□□ 1.23
Trim47-202ENSMUST00000106441 Cc2d1aQ8K1A6 943 aa22.74■■□□□ 1.23
Trim47-202ENSMUST00000106441 Nsd3Q6P2L6 1439 aa22.74■■□□□ 1.23
Trim47-202ENSMUST00000106441 Gm10093D3YYI8 482 aa22.73■■□□□ 1.23
Trim47-202ENSMUST00000106441 Hdac1O09106 482 aaKnown RBP22.73■■□□□ 1.23
Trim47-202ENSMUST00000106441 Cdc37l1Q9CZP7 335 aa22.73■■□□□ 1.23
Trim47-202ENSMUST00000106441 Cypt2Q6P924 180 aa22.73■■□□□ 1.23
Trim47-202ENSMUST00000106441 Akap11E9Q777 1895 aa22.73■■□□□ 1.23
Trim47-202ENSMUST00000106441 Gnai1B2RSH2 354 aa22.72■■□□□ 1.23
Trim47-202ENSMUST00000106441 InhbeO08717 350 aa22.72■■□□□ 1.23
Trim47-202ENSMUST00000106441 Tnrc6cQ3UHC0 1690 aaKnown RBP22.72■■□□□ 1.23
Trim47-202ENSMUST00000106441 Sf3b2Q3UJB0 878 aaKnown RBP22.72■■□□□ 1.23
Trim47-202ENSMUST00000106441 Gnai3Q9DC51 354 aa22.72■■□□□ 1.23
Trim47-202ENSMUST00000106441 LifrP42703 1092 aa22.72■■□□□ 1.23
Trim47-202ENSMUST00000106441 Ccdc129Q14B48 1034 aa22.72■■□□□ 1.23
Trim47-202ENSMUST00000106441 Amotl1Q9D4H4 968 aa22.72■■□□□ 1.23
Trim47-202ENSMUST00000106441 Adgrb1Q3UHD1 1582 aa22.71■■□□□ 1.23
Trim47-202ENSMUST00000106441 Ankrd44B2RXR6 993 aa22.71■■□□□ 1.23
Trim47-202ENSMUST00000106441 Vamp4O70480 141 aa22.71■■□□□ 1.23
Trim47-202ENSMUST00000106441 ThemisQ8BGW0 636 aa22.71■■□□□ 1.23
Trim47-202ENSMUST00000106441 Kat6bQ8BRB7 1872 aa22.71■■□□□ 1.23
Trim47-202ENSMUST00000106441 Cacna1sQ02789 1880 aa22.7■■□□□ 1.22
Trim47-202ENSMUST00000106441 Fam50bQ9WTJ8 334 aa22.7■■□□□ 1.22
Trim47-202ENSMUST00000106441 Tnks1bp1P58871 1720 aa22.7■■□□□ 1.22
Trim47-202ENSMUST00000106441 Mcm4P49717 862 aa22.69■■□□□ 1.22
Trim47-202ENSMUST00000106441 Fer1l6E0CZ42 1862 aa22.69■■□□□ 1.22
Trim47-202ENSMUST00000106441 Cavin2Q63918 418 aaKnown RBP22.69■■□□□ 1.22
Trim47-202ENSMUST00000106441 Tmco5bQ80X59 307 aa22.69■■□□□ 1.22
Trim47-202ENSMUST00000106441 Pm20d1Q8C165 503 aa22.68■■□□□ 1.22
Trim47-202ENSMUST00000106441 4930572O03RikQ8C5Y0 211 aa22.68■■□□□ 1.22
Trim47-202ENSMUST00000106441 Sos1Q62245 1319 aa22.67■■□□□ 1.22
Trim47-202ENSMUST00000106441 Isy1Q69ZQ2 285 aaKnown RBP22.67■■□□□ 1.22
Trim47-202ENSMUST00000106441 Ssh1Q76I79 1042 aa22.67■■□□□ 1.22
Trim47-202ENSMUST00000106441 Dmrt2Q8BG36 561 aa22.67■■□□□ 1.22
Trim47-202ENSMUST00000106441 Nutm1Q8BHP2 1126 aa22.67■■□□□ 1.22
Trim47-202ENSMUST00000106441 Wdr63B2RY71 923 aa22.66■■□□□ 1.22
Trim47-202ENSMUST00000106441 Cgnl1Q6AW69 1298 aa22.66■■□□□ 1.22
Trim47-202ENSMUST00000106441 Rsph3aQ3UFY4 516 aa22.65■■□□□ 1.22
Trim47-202ENSMUST00000106441 Nup153E9Q3G8 1462 aaKnown RBP22.65■■□□□ 1.22
Trim47-202ENSMUST00000106441 Rtf1A2AQ19 715 aaKnown RBP22.65■■□□□ 1.22
Trim47-202ENSMUST00000106441 Nectin2P32507 530 aa22.65■■□□□ 1.22
Trim47-202ENSMUST00000106441 Rangap1P46061 589 aaKnown RBP22.63■■□□□ 1.21
Trim47-202ENSMUST00000106441 Mast2Q60592 1734 aa22.63■■□□□ 1.21
Trim47-202ENSMUST00000106441 Speer4bQ9D9F7 267 aa22.63■■□□□ 1.21
Trim47-202ENSMUST00000106441 Tns2Q8CGB6 1400 aa22.63■■□□□ 1.21
Trim47-202ENSMUST00000106441 Kdm4cQ8VCD7 1054 aa22.62■■□□□ 1.21
Trim47-202ENSMUST00000106441 HnrnpuQ8VEK3 800 aaKnown RBP22.62■■□□□ 1.21
Trim47-202ENSMUST00000106441 Aox2Q5SGK3 1345 aa22.61■■□□□ 1.21
Trim47-202ENSMUST00000106441 Gm21680A0A0G2JGR8 267 aa22.6■■□□□ 1.21
Trim47-202ENSMUST00000106441 Snap23O09044 210 aa22.6■■□□□ 1.21
Trim47-202ENSMUST00000106441 Sgsm1Q8BPQ7 1093 aa22.6■■□□□ 1.21
Trim47-202ENSMUST00000106441 CarsQ9ER72 831 aaKnown RBP22.6■■□□□ 1.21
Trim47-202ENSMUST00000106441 Ltbp1Q8CG19 1712 aa22.6■■□□□ 1.21
Trim47-202ENSMUST00000106441 Spryd3E9Q9B3 442 aa22.6■■□□□ 1.21
Trim47-202ENSMUST00000106441 Ginm1Q91WR6 327 aa22.6■■□□□ 1.21
Trim47-202ENSMUST00000106441 Mst1rQ62190 1378 aa22.6■■□□□ 1.21
Trim47-202ENSMUST00000106441 Nwd2Q6P5U7 1742 aa22.6■■□□□ 1.21
Trim47-202ENSMUST00000106441 Tbc1d9Q3UYK3 1264 aa22.59■■□□□ 1.21
Trim47-202ENSMUST00000106441 Aldh8a1Q8BH00 487 aa22.59■■□□□ 1.21
Trim47-202ENSMUST00000106441 Trim27Q62158 513 aa22.58■■□□□ 1.21
Trim47-202ENSMUST00000106441 Kcnh4A2A5F7 1018 aa22.57■■□□□ 1.2
Trim47-202ENSMUST00000106441 MarsQ68FL6 902 aaKnown RBP22.57■■□□□ 1.2
Trim47-202ENSMUST00000106441 Elp1Q7TT37 1333 aaKnown RBP22.57■■□□□ 1.2
Trim47-202ENSMUST00000106441 Ankrd23Q812A3 306 aa22.57■■□□□ 1.2
Trim47-202ENSMUST00000106441 Eif3bQ8JZQ9 803 aaKnown RBP22.57■■□□□ 1.2
Trim47-202ENSMUST00000106441 Aldh1l2Q8K009 923 aa22.57■■□□□ 1.2
Trim47-202ENSMUST00000106441 Phkg2Q9DB30 406 aa22.57■■□□□ 1.2
Trim47-202ENSMUST00000106441 Plcb2A3KGF7 1181 aa22.56■■□□□ 1.2
Trim47-202ENSMUST00000106441 Fbln2P37889 1221 aa22.56■■□□□ 1.2
Trim47-202ENSMUST00000106441 Sik1Q60670 779 aa22.56■■□□□ 1.2
Trim47-202ENSMUST00000106441 Pdzd9Q9D9M4 266 aa22.56■■□□□ 1.2
Trim47-202ENSMUST00000106441 Abcc12Q80WJ6 1366 aa22.56■■□□□ 1.2
Trim47-202ENSMUST00000106441 Chmp7Q8R1T1 451 aa22.56■■□□□ 1.2
Trim47-202ENSMUST00000106441 Usp16Q99LG0 825 aa22.56■■□□□ 1.2
Trim47-202ENSMUST00000106441 Anapc15-psA0A140T8L6 141 aa22.55■■□□□ 1.2
Trim47-202ENSMUST00000106441 Ddit3P35639 168 aa22.55■■□□□ 1.2
Trim47-202ENSMUST00000106441 Mcm2P97310 904 aa22.55■■□□□ 1.2
Trim47-202ENSMUST00000106441 Eif4g2Q62448 906 aaKnown RBP22.55■■□□□ 1.2
Trim47-202ENSMUST00000106441 Gcc1Q9D4H2 778 aa22.55■■□□□ 1.2
Trim47-202ENSMUST00000106441 1700010I14RikQ7TPG0 532 aa22.55■■□□□ 1.2
Trim47-202ENSMUST00000106441 Nsfl1cQ9CZ44 370 aaKnown RBP22.55■■□□□ 1.2
Trim47-202ENSMUST00000106441 Vps33bP59016 617 aa22.54■■□□□ 1.2
Trim47-202ENSMUST00000106441 Nek4Q9Z1J2 792 aa22.54■■□□□ 1.2
Trim47-202ENSMUST00000106441 Myo5bP21271 1818 aa22.54■■□□□ 1.2
Trim47-202ENSMUST00000106441 Rfx1P48377 963 aa22.53■■□□□ 1.2
Trim47-202ENSMUST00000106441 Rrp12Q6P5B0 1295 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 22,080 RNA–protein pairs in 1442.5 ms