RNA–Protein interactions for RNA: ENSMUST00000087253.10

Tro-201, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 3,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-201ENSMUST00000087253 4931400O07RikQ9D4M5 137 aa12.81□□□□□ -0.36
Tro-201ENSMUST00000087253 Cyp46a1Q9WVK8 500 aa12.81□□□□□ -0.36
Tro-201ENSMUST00000087253 Gm9992B2RWK3 458 aa12.81□□□□□ -0.36
Tro-201ENSMUST00000087253 Gadd45bP22339 160 aa12.81□□□□□ -0.36
Tro-201ENSMUST00000087253 Unc93aQ710D3 458 aa12.81□□□□□ -0.36
Tro-201ENSMUST00000087253 NgefQ8CHT1 710 aa12.81□□□□□ -0.36
Tro-201ENSMUST00000087253 Stk31Q99MW1 1018 aa12.81□□□□□ -0.36
Tro-201ENSMUST00000087253 Cyp27a1Q9DBG1 533 aa12.81□□□□□ -0.36
Tro-201ENSMUST00000087253 Bcar3Q9QZK2 820 aa12.81□□□□□ -0.36
Tro-201ENSMUST00000087253 FocadA2AKG8 1798 aa12.8□□□□□ -0.36
Tro-201ENSMUST00000087253 Pank2Q3U4S0 443 aa12.8□□□□□ -0.36
Tro-201ENSMUST00000087253 IbspQ61711 324 aa12.8□□□□□ -0.36
Tro-201ENSMUST00000087253 Ano8Q6PB70 1060 aa12.8□□□□□ -0.36
Tro-201ENSMUST00000087253 Hsp90b1P08113 802 aaKnown RBP12.8□□□□□ -0.36
Tro-201ENSMUST00000087253 Cpa2Q504N0 417 aa12.8□□□□□ -0.36
Tro-201ENSMUST00000087253 Nol12Q8BG17 217 aa12.8□□□□□ -0.36
Tro-201ENSMUST00000087253 Kif24Q6NWW5 1356 aa12.79□□□□□ -0.36
Tro-201ENSMUST00000087253 Erbb4Q61527 1308 aa12.79□□□□□ -0.36
Tro-201ENSMUST00000087253 Irx6Q9ER75 438 aa12.79□□□□□ -0.36
Tro-201ENSMUST00000087253 Ush1cQ9ES64 910 aa12.79□□□□□ -0.36
Tro-201ENSMUST00000087253 ImpactO55091 318 aa12.79□□□□□ -0.36
Tro-201ENSMUST00000087253 Zdhhc9P59268 364 aa12.79□□□□□ -0.36
Tro-201ENSMUST00000087253 Mcm2P97310 904 aa12.79□□□□□ -0.36
Tro-201ENSMUST00000087253 Clcn1Q64347 994 aa12.79□□□□□ -0.36
Tro-201ENSMUST00000087253 MarsQ68FL6 902 aaKnown RBP12.79□□□□□ -0.36
Tro-201ENSMUST00000087253 Prune1Q8BIW1 454 aa12.79□□□□□ -0.36
Tro-201ENSMUST00000087253 Atg4a-psA0A0G2JFS9 396 aa12.78□□□□□ -0.36
Tro-201ENSMUST00000087253 Tpm2P58774 284 aa12.78□□□□□ -0.36
Tro-201ENSMUST00000087253 Atg4aQ8C9S8 396 aa12.78□□□□□ -0.36
Tro-201ENSMUST00000087253 Erc2Q6PH08 957 aa12.78□□□□□ -0.36
Tro-201ENSMUST00000087253 FancaQ9JL70 1439 aa12.78□□□□□ -0.36
Tro-201ENSMUST00000087253 Hmox1P14901 289 aa12.77□□□□□ -0.36
Tro-201ENSMUST00000087253 Tshz3Q8CGV9 1081 aa12.77□□□□□ -0.36
Tro-201ENSMUST00000087253 Zkscan16A2ALW2 728 aa12.77□□□□□ -0.37
Tro-201ENSMUST00000087253 Bcl9lQ67FY2 1494 aa12.77□□□□□ -0.37
Tro-201ENSMUST00000087253 Gm10563F6WIE4 79 aa12.77□□□□□ -0.37
Tro-201ENSMUST00000087253 Eif4a2P10630 407 aa12.76□□□□□ -0.37
Tro-201ENSMUST00000087253 NexnQ7TPW1 607 aa12.76□□□□□ -0.37
Tro-201ENSMUST00000087253 Becn1O88597 448 aa12.76□□□□□ -0.37
Tro-201ENSMUST00000087253 Ripk4Q9ERK0 786 aa12.76□□□□□ -0.37
Tro-201ENSMUST00000087253 Tm6sf1P58749 370 aa12.75□□□□□ -0.37
Tro-201ENSMUST00000087253 Gripap1Q8VD04 806 aa12.75□□□□□ -0.37
Tro-201ENSMUST00000087253 BcorQ8CGN4 1759 aa12.75□□□□□ -0.37
Tro-201ENSMUST00000087253 Tmem94Q7TSH8 1360 aa12.75□□□□□ -0.37
Tro-201ENSMUST00000087253 Prim1P20664 417 aa12.75□□□□□ -0.37
Tro-201ENSMUST00000087253 Cavin2Q63918 418 aaKnown RBP12.75□□□□□ -0.37
Tro-201ENSMUST00000087253 Fez1Q8K0X8 392 aa12.75□□□□□ -0.37
Tro-201ENSMUST00000087253 Nlgn1Q99K10 843 aa12.75□□□□□ -0.37
Tro-201ENSMUST00000087253 Nup153E9Q3G8 1462 aaKnown RBP12.75□□□□□ -0.37
Tro-201ENSMUST00000087253 Tnks1bp1P58871 1720 aa12.75□□□□□ -0.37
Tro-201ENSMUST00000087253 Snap23O09044 210 aa12.75□□□□□ -0.37
Tro-201ENSMUST00000087253 Sv2bQ8BG39 683 aa12.75□□□□□ -0.37
Tro-201ENSMUST00000087253 Sos1Q62245 1319 aa12.74□□□□□ -0.37
Tro-201ENSMUST00000087253 Tnnt1O88346 262 aa12.74□□□□□ -0.37
Tro-201ENSMUST00000087253 Rcan3Q9JKK0 239 aa12.74□□□□□ -0.37
Tro-201ENSMUST00000087253 Frmpd2A0A140LI67 1392 aa12.74□□□□□ -0.37
Tro-201ENSMUST00000087253 Filip1lQ6P6L0 1131 aa12.74□□□□□ -0.37
Tro-201ENSMUST00000087253 Srgap3Q812A2 1099 aa12.74□□□□□ -0.37
Tro-201ENSMUST00000087253 Elp1Q7TT37 1333 aaKnown RBP12.74□□□□□ -0.37
Tro-201ENSMUST00000087253 Zfp777B9EKF4 885 aa12.73□□□□□ -0.37
Tro-201ENSMUST00000087253 Ythdc1E9Q5K9 736 aaKnown RBP12.73□□□□□ -0.37
Tro-201ENSMUST00000087253 Ncoa4Q5U4H9 625 aa12.73□□□□□ -0.37
Tro-201ENSMUST00000087253 Aldh1l2Q8K009 923 aa12.73□□□□□ -0.37
Tro-201ENSMUST00000087253 Kif4P33174 1231 aa12.73□□□□□ -0.37
Tro-201ENSMUST00000087253 Irf5P56477 497 aa12.73□□□□□ -0.37
Tro-201ENSMUST00000087253 Gzf1Q4VBD9 706 aa12.73□□□□□ -0.37
Tro-201ENSMUST00000087253 TmpoQ61033 693 aaKnown RBP12.73□□□□□ -0.37
Tro-201ENSMUST00000087253 Dlg5E9Q9R9 1921 aa12.73□□□□□ -0.37
Tro-201ENSMUST00000087253 Sytl4Q9R0Q1 673 aa12.73□□□□□ -0.37
Tro-201ENSMUST00000087253 Zscan25B2RX31 543 aa12.72□□□□□ -0.37
Tro-201ENSMUST00000087253 Chl1P70232 1209 aa12.72□□□□□ -0.37
Tro-201ENSMUST00000087253 Rtf1A2AQ19 715 aaKnown RBP12.72□□□□□ -0.37
Tro-201ENSMUST00000087253 Fam83gQ5SWY7 812 aa12.72□□□□□ -0.37
Tro-201ENSMUST00000087253 RestQ8VIG1 1082 aa12.72□□□□□ -0.37
Tro-201ENSMUST00000087253 PtmsQ9D0J8 101 aaKnown RBP12.72□□□□□ -0.37
Tro-201ENSMUST00000087253 Pcmtd1P59913 357 aa12.71□□□□□ -0.37
Tro-201ENSMUST00000087253 Q3TQI7 289 aaKnown RBP12.71□□□□□ -0.37
Tro-201ENSMUST00000087253 Ptpdc1Q6NZK8 747 aa12.71□□□□□ -0.37
Tro-201ENSMUST00000087253 Tex2Q6ZPJ0 1128 aaKnown RBP12.71□□□□□ -0.37
Tro-201ENSMUST00000087253 Mknk2Q8CDB0 459 aa12.71□□□□□ -0.37
Tro-201ENSMUST00000087253 Marf1Q8BJ34 1730 aaKnown RBP12.71□□□□□ -0.37
Tro-201ENSMUST00000087253 MccE9PWI3 1003 aa12.71□□□□□ -0.37
Tro-201ENSMUST00000087253 Zkscan2G3X952 960 aa12.71□□□□□ -0.37
Tro-201ENSMUST00000087253 EvcP57680 1005 aa12.71□□□□□ -0.37
Tro-201ENSMUST00000087253 Jakmip1Q8BVL9 626 aa12.71□□□□□ -0.37
Tro-201ENSMUST00000087253 Ppp1r42Q8R1Z4 357 aa12.71□□□□□ -0.37
Tro-201ENSMUST00000087253 Nphp1Q9QY53 687 aa12.71□□□□□ -0.37
Tro-201ENSMUST00000087253 DccP70211 1447 aa12.71□□□□□ -0.37
Tro-201ENSMUST00000087253 St18Q80TY4 1045 aa12.71□□□□□ -0.38
Tro-201ENSMUST00000087253 Chd1lQ9CXF7 900 aa12.71□□□□□ -0.38
Tro-201ENSMUST00000087253 Mrps27Q8BK72 415 aaKnown RBP12.7□□□□□ -0.38
Tro-201ENSMUST00000087253 Msh6P54276 1358 aaKnown RBP12.7□□□□□ -0.38
Tro-201ENSMUST00000087253 Gnai2P08752 355 aaKnown RBP12.69□□□□□ -0.38
Tro-201ENSMUST00000087253 Cwc27Q3TKY6 469 aa12.69□□□□□ -0.38
Tro-201ENSMUST00000087253 Olfml1Q8BSH2 233 aa12.69□□□□□ -0.38
Tro-201ENSMUST00000087253 Gse1Q3U3C9 1213 aa12.69□□□□□ -0.38
Tro-201ENSMUST00000087253 Ubr2Q6WKZ8 1755 aa12.69□□□□□ -0.38
Tro-201ENSMUST00000087253 Gm45015A0A140LII9 184 aa12.69□□□□□ -0.38
Tro-201ENSMUST00000087253 Gm18336A0A140LIU8 765 aa12.69□□□□□ -0.38
Tro-201ENSMUST00000087253 Vwa3bJ9JI28 736 aa12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 121.5 ms