RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Igsf1Q7TQA1 1317 aa11□□□□□ -0.65
Trim39-201ENSMUST00000042717 Ubap1lG3UW59 384 aa11□□□□□ -0.65
Trim39-201ENSMUST00000042717 Ccnl1Q52KE7 532 aaKnown RBP11□□□□□ -0.65
Trim39-201ENSMUST00000042717 Cavin2Q63918 418 aaKnown RBP11□□□□□ -0.65
Trim39-201ENSMUST00000042717 Elp1Q7TT37 1333 aaKnown RBP11□□□□□ -0.65
Trim39-201ENSMUST00000042717 Col1a2Q01149 1372 aa10.99□□□□□ -0.65
Trim39-201ENSMUST00000042717 Znf521Q6KAS7 1311 aa10.99□□□□□ -0.65
Trim39-201ENSMUST00000042717 Efcab2Q9CQ46 164 aa10.99□□□□□ -0.65
Trim39-201ENSMUST00000042717 Chmp5Q9D7S9 219 aa10.99□□□□□ -0.65
Trim39-201ENSMUST00000042717 Kdm2bQ6P1G2 1309 aa10.99□□□□□ -0.65
Trim39-201ENSMUST00000042717 Triml2E9PW10 424 aa10.99□□□□□ -0.65
Trim39-201ENSMUST00000042717 Ankrd44B2RXR6 993 aa10.98□□□□□ -0.65
Trim39-201ENSMUST00000042717 Prkab2Q6PAM0 271 aa10.98□□□□□ -0.65
Trim39-201ENSMUST00000042717 Sgsm1Q8BPQ7 1093 aa10.98□□□□□ -0.65
Trim39-201ENSMUST00000042717 TefQ9JLC6 301 aa10.98□□□□□ -0.65
Trim39-201ENSMUST00000042717 Tns2Q8CGB6 1400 aa10.98□□□□□ -0.65
Trim39-201ENSMUST00000042717 Msh6P54276 1358 aaKnown RBP10.98□□□□□ -0.65
Trim39-201ENSMUST00000042717 Exoc6bA6H5Z3 810 aa10.98□□□□□ -0.65
Trim39-201ENSMUST00000042717 Sema6bO54951 886 aa10.98□□□□□ -0.65
Trim39-201ENSMUST00000042717 Exoc5Q3TPX4 708 aa10.98□□□□□ -0.65
Trim39-201ENSMUST00000042717 Slc39a6Q8C145 765 aa10.98□□□□□ -0.65
Trim39-201ENSMUST00000042717 Sik1Q60670 779 aa10.97□□□□□ -0.65
Trim39-201ENSMUST00000042717 Clcn1Q64347 994 aa10.97□□□□□ -0.65
Trim39-201ENSMUST00000042717 Ints5Q8CHT3 1018 aa10.97□□□□□ -0.65
Trim39-201ENSMUST00000042717 MypopQ8R4U1 393 aa10.97□□□□□ -0.65
Trim39-201ENSMUST00000042717 FocadA2AKG8 1798 aa10.97□□□□□ -0.65
Trim39-201ENSMUST00000042717 AU019823E9PUQ3 292 aa10.96□□□□□ -0.65
Trim39-201ENSMUST00000042717 PsapQ61207 557 aaKnown RBP10.96□□□□□ -0.65
Trim39-201ENSMUST00000042717 Taf7Q9R1C0 341 aa10.96□□□□□ -0.65
Trim39-201ENSMUST00000042717 Adgrb1Q3UHD1 1582 aa10.96□□□□□ -0.66
Trim39-201ENSMUST00000042717 SympkQ80X82 1284 aa10.96□□□□□ -0.66
Trim39-201ENSMUST00000042717 Ssfa2Q922B9 1252 aa10.96□□□□□ -0.66
Trim39-201ENSMUST00000042717 Cyp2d11P24457 504 aa10.95□□□□□ -0.66
Trim39-201ENSMUST00000042717 Map3k13Q1HKZ5 959 aa10.95□□□□□ -0.66
Trim39-201ENSMUST00000042717 Akap11E9Q777 1895 aa10.95□□□□□ -0.66
Trim39-201ENSMUST00000042717 Ddb1Q3U1J4 1140 aaKnown RBP10.95□□□□□ -0.66
Trim39-201ENSMUST00000042717 Marf1Q8BJ34 1730 aaKnown RBP10.95□□□□□ -0.66
Trim39-201ENSMUST00000042717 Hspa2P17156 633 aa10.95□□□□□ -0.66
Trim39-201ENSMUST00000042717 Smg7Q5RJH6 1138 aaKnown RBP10.95□□□□□ -0.66
Trim39-201ENSMUST00000042717 Mphosph10Q810V0 681 aaKnown RBP10.95□□□□□ -0.66
Trim39-201ENSMUST00000042717 Ankrd23Q812A3 306 aa10.95□□□□□ -0.66
Trim39-201ENSMUST00000042717 Pm20d1Q8C165 503 aa10.95□□□□□ -0.66
Trim39-201ENSMUST00000042717 Disp3A3KFU9 1347 aa10.94□□□□□ -0.66
Trim39-201ENSMUST00000042717 Prkar2bP31324 416 aa10.94□□□□□ -0.66
Trim39-201ENSMUST00000042717 4930567H17RikQ3V0K5 233 aa10.94□□□□□ -0.66
Trim39-201ENSMUST00000042717 CoilQ5SU73 570 aa10.94□□□□□ -0.66
Trim39-201ENSMUST00000042717 Smc5Q8CG46 1101 aaKnown RBP10.94□□□□□ -0.66
Trim39-201ENSMUST00000042717 Cap2Q9CYT6 476 aa10.94□□□□□ -0.66
Trim39-201ENSMUST00000042717 Tnks1bp1P58871 1720 aa10.93□□□□□ -0.66
Trim39-201ENSMUST00000042717 Cnksr1A2A9K7 700 aa10.93□□□□□ -0.66
Trim39-201ENSMUST00000042717 Iqsec3Q3TES0 1195 aa10.93□□□□□ -0.66
Trim39-201ENSMUST00000042717 Emilin2Q8K482 1074 aa10.93□□□□□ -0.66
Trim39-201ENSMUST00000042717 Pdia6Q922R8 440 aaKnown RBP10.93□□□□□ -0.66
Trim39-201ENSMUST00000042717 Cfdp1O88271 295 aaKnown RBP10.93□□□□□ -0.66
Trim39-201ENSMUST00000042717 Zap70P43404 618 aa10.93□□□□□ -0.66
Trim39-201ENSMUST00000042717 Igfbp6P47880 238 aa10.93□□□□□ -0.66
Trim39-201ENSMUST00000042717 Map3k2Q61083 619 aa10.93□□□□□ -0.66
Trim39-201ENSMUST00000042717 Bsdc1Q80Y55 427 aa10.93□□□□□ -0.66
Trim39-201ENSMUST00000042717 Kcnh4A2A5F7 1018 aa10.93□□□□□ -0.66
Trim39-201ENSMUST00000042717 Ttll7A4Q9F0 912 aa10.93□□□□□ -0.66
Trim39-201ENSMUST00000042717 Dmrt2Q8BG36 561 aa10.93□□□□□ -0.66
Trim39-201ENSMUST00000042717 Chmp4bQ9D8B3 224 aaKnown RBP10.93□□□□□ -0.66
Trim39-201ENSMUST00000042717 Ginm1Q91WR6 327 aa10.92□□□□□ -0.66
Trim39-201ENSMUST00000042717 EspnQ9ET47 871 aa10.92□□□□□ -0.66
Trim39-201ENSMUST00000042717 AceP09470 1312 aa10.92□□□□□ -0.66
Trim39-201ENSMUST00000042717 Q8BT18 775 aa10.92□□□□□ -0.66
Trim39-201ENSMUST00000042717 Flad1Q8R123 492 aa10.92□□□□□ -0.66
Trim39-201ENSMUST00000042717 Echdc1Q9D9V3 322 aa10.92□□□□□ -0.66
Trim39-201ENSMUST00000042717 Irf9Q61179 399 aa10.91□□□□□ -0.66
Trim39-201ENSMUST00000042717 Pnpla7A2AJ88 1352 aa10.91□□□□□ -0.66
Trim39-201ENSMUST00000042717 Tmem119Q8R138 280 aa10.9□□□□□ -0.66
Trim39-201ENSMUST00000042717 Dlg5E9Q9R9 1921 aa10.9□□□□□ -0.66
Trim39-201ENSMUST00000042717 Hdac6Q9Z2V5 1149 aa10.9□□□□□ -0.67
Trim39-201ENSMUST00000042717 Syde2E9PUP1 1314 aa10.9□□□□□ -0.67
Trim39-201ENSMUST00000042717 Trim30dE9PWL0 497 aa10.89□□□□□ -0.67
Trim39-201ENSMUST00000042717 Pnmal2G3X9N3 661 aa10.89□□□□□ -0.67
Trim39-201ENSMUST00000042717 InhbeO08717 350 aa10.89□□□□□ -0.67
Trim39-201ENSMUST00000042717 Bicc1Q99MQ1 977 aaKnown RBP10.89□□□□□ -0.67
Trim39-201ENSMUST00000042717 Cntnap1O54991 1385 aa10.89□□□□□ -0.67
Trim39-201ENSMUST00000042717 Gnai2P08752 355 aaKnown RBP10.88□□□□□ -0.67
Trim39-201ENSMUST00000042717 Liat1Q810M6 228 aa10.88□□□□□ -0.67
Trim39-201ENSMUST00000042717 Atg3Q9CPX6 314 aa10.88□□□□□ -0.67
Trim39-201ENSMUST00000042717 AampJ3QN89 436 aa10.88□□□□□ -0.67
Trim39-201ENSMUST00000042717 Crb1Q8VHS2 1405 aa10.88□□□□□ -0.67
Trim39-201ENSMUST00000042717 Adcy9P51830 1353 aa10.88□□□□□ -0.67
Trim39-201ENSMUST00000042717 Cwc27Q3TKY6 469 aa10.88□□□□□ -0.67
Trim39-201ENSMUST00000042717 Smarca5Q91ZW3 1051 aaKnown RBP10.88□□□□□ -0.67
Trim39-201ENSMUST00000042717 Slc4a10Q5DTL9 1118 aa10.87□□□□□ -0.67
Trim39-201ENSMUST00000042717 Trim27Q62158 513 aa10.87□□□□□ -0.67
Trim39-201ENSMUST00000042717 Dcaf5Q80T85 946 aa10.87□□□□□ -0.67
Trim39-201ENSMUST00000042717 Srgap3Q812A2 1099 aa10.87□□□□□ -0.67
Trim39-201ENSMUST00000042717 Aldh1l2Q8K009 923 aa10.87□□□□□ -0.67
Trim39-201ENSMUST00000042717 HnrnpuQ8VEK3 800 aaKnown RBP10.87□□□□□ -0.67
Trim39-201ENSMUST00000042717 Lrp6O88572 1613 aa10.87□□□□□ -0.67
Trim39-201ENSMUST00000042717 Ccdc146E9Q9F7 977 aa10.87□□□□□ -0.67
Trim39-201ENSMUST00000042717 PrkcshO08795 521 aa10.87□□□□□ -0.67
Trim39-201ENSMUST00000042717 Bend3Q6PAL0 825 aa10.87□□□□□ -0.67
Trim39-201ENSMUST00000042717 Fam13aQ8BGI4 693 aa10.87□□□□□ -0.67
Trim39-201ENSMUST00000042717 Klc3Q91W40 508 aa10.87□□□□□ -0.67
Trim39-201ENSMUST00000042717 Myo5bP21271 1818 aa10.87□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms