RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Shank2Q80Z38 1476 aa25.52■■□□□ 1.68
Trim47-201ENSMUST00000021120 Sptbn5F6UCX4 1208 aa25.52■■□□□ 1.68
Trim47-201ENSMUST00000021120 Cntnap1O54991 1385 aa25.52■■□□□ 1.68
Trim47-201ENSMUST00000021120 Vamp4O70480 141 aa25.52■■□□□ 1.68
Trim47-201ENSMUST00000021120 Ppp2r3aB2RXC8 1150 aa25.51■■□□□ 1.67
Trim47-201ENSMUST00000021120 Ccdc129Q14B48 1034 aa25.5■■□□□ 1.67
Trim47-201ENSMUST00000021120 Fer1l6E0CZ42 1862 aa25.49■■□□□ 1.67
Trim47-201ENSMUST00000021120 G3bp1P97855 465 aaKnown RBP25.49■■□□□ 1.67
Trim47-201ENSMUST00000021120 Lrp6O88572 1613 aa25.49■■□□□ 1.67
Trim47-201ENSMUST00000021120 Nkx2-3P97334 362 aa25.48■■□□□ 1.67
Trim47-201ENSMUST00000021120 Pm20d1Q8C165 503 aa25.48■■□□□ 1.67
Trim47-201ENSMUST00000021120 Foxp4Q9DBY0 795 aaKnown RBP25.48■■□□□ 1.67
Trim47-201ENSMUST00000021120 Igsf1Q7TQA1 1317 aa25.48■■□□□ 1.67
Trim47-201ENSMUST00000021120 Cacna1sQ02789 1880 aa25.48■■□□□ 1.67
Trim47-201ENSMUST00000021120 Sf3b2Q3UJB0 878 aaKnown RBP25.48■■□□□ 1.67
Trim47-201ENSMUST00000021120 Larp1Q6ZQ58 1072 aaKnown RBP25.48■■□□□ 1.67
Trim47-201ENSMUST00000021120 Asic4Q7TNS7 539 aa25.48■■□□□ 1.67
Trim47-201ENSMUST00000021120 MypopQ8R4U1 393 aa25.48■■□□□ 1.67
Trim47-201ENSMUST00000021120 Btbd11Q6GQW0 1109 aa25.47■■□□□ 1.67
Trim47-201ENSMUST00000021120 Ssfa2Q922B9 1252 aa25.47■■□□□ 1.67
Trim47-201ENSMUST00000021120 Tbc1d32Q3URV1 1296 aa25.47■■□□□ 1.67
Trim47-201ENSMUST00000021120 4933402E13RikQ9D4D2 429 aa25.47■■□□□ 1.67
Trim47-201ENSMUST00000021120 DmtnQ9WV69 405 aa25.47■■□□□ 1.67
Trim47-201ENSMUST00000021120 Gm21663A0A0G2JE01 267 aa25.46■■□□□ 1.67
Trim47-201ENSMUST00000021120 AU015836B2RUM3 263 aa25.46■■□□□ 1.67
Trim47-201ENSMUST00000021120 Gm7361D3Z6R1 267 aa25.46■■□□□ 1.67
Trim47-201ENSMUST00000021120 5031410I06RikE9Q4E0 267 aa25.46■■□□□ 1.67
Trim47-201ENSMUST00000021120 Gm1979E9QAN3 267 aa25.46■■□□□ 1.67
Trim47-201ENSMUST00000021120 Gm5862K7N5V5 267 aa25.46■■□□□ 1.67
Trim47-201ENSMUST00000021120 Gm10220K7N660 267 aa25.46■■□□□ 1.67
Trim47-201ENSMUST00000021120 Slc5a1Q8C3K6 665 aa25.46■■□□□ 1.67
Trim47-201ENSMUST00000021120 KarsQ99MN1 595 aaKnown RBP25.46■■□□□ 1.67
Trim47-201ENSMUST00000021120 Eno4Q8C042 619 aa25.45■■□□□ 1.67
Trim47-201ENSMUST00000021120 Elp1Q7TT37 1333 aaKnown RBP25.45■■□□□ 1.67
Trim47-201ENSMUST00000021120 Ubr2Q6WKZ8 1755 aa25.45■■□□□ 1.66
Trim47-201ENSMUST00000021120 Rangap1P46061 589 aaKnown RBP25.45■■□□□ 1.66
Trim47-201ENSMUST00000021120 Ginm1Q91WR6 327 aa25.45■■□□□ 1.66
Trim47-201ENSMUST00000021120 Tnrc6cQ3UHC0 1690 aaKnown RBP25.44■■□□□ 1.66
Trim47-201ENSMUST00000021120 Kcnh4A2A5F7 1018 aa25.44■■□□□ 1.66
Trim47-201ENSMUST00000021120 Q3TQI7 289 aaKnown RBP25.44■■□□□ 1.66
Trim47-201ENSMUST00000021120 Rabep1O35551 862 aa25.44■■□□□ 1.66
Trim47-201ENSMUST00000021120 Plekhm2Q80TQ5 1018 aa25.44■■□□□ 1.66
Trim47-201ENSMUST00000021120 Ccdc155Q80VJ8 648 aa25.44■■□□□ 1.66
Trim47-201ENSMUST00000021120 Nsd3Q6P2L6 1439 aa25.44■■□□□ 1.66
Trim47-201ENSMUST00000021120 Antxr1Q9CZ52 562 aa25.43■■□□□ 1.66
Trim47-201ENSMUST00000021120 Mst1rQ62190 1378 aa25.43■■□□□ 1.66
Trim47-201ENSMUST00000021120 Atl3Q91YH5 541 aa25.43■■□□□ 1.66
Trim47-201ENSMUST00000021120 Mast2Q60592 1734 aa25.42■■□□□ 1.66
Trim47-201ENSMUST00000021120 Dlg5E9Q9R9 1921 aa25.41■■□□□ 1.66
Trim47-201ENSMUST00000021120 InhbeO08717 350 aa25.41■■□□□ 1.66
Trim47-201ENSMUST00000021120 Tmco5bQ80X59 307 aa25.41■■□□□ 1.66
Trim47-201ENSMUST00000021120 Dnttip2Q8R2M2 758 aaKnown RBP25.41■■□□□ 1.66
Trim47-201ENSMUST00000021120 Irx6Q9ER75 438 aa25.41■■□□□ 1.66
Trim47-201ENSMUST00000021120 Nwd2Q6P5U7 1742 aa25.4■■□□□ 1.66
Trim47-201ENSMUST00000021120 Sik1Q60670 779 aa25.4■■□□□ 1.66
Trim47-201ENSMUST00000021120 Cavin2Q63918 418 aaKnown RBP25.4■■□□□ 1.66
Trim47-201ENSMUST00000021120 Tnpo1Q8BFY9 898 aaKnown RBP25.4■■□□□ 1.66
Trim47-201ENSMUST00000021120 Rtn4Q99P72 1162 aaKnown RBP25.4■■□□□ 1.66
Trim47-201ENSMUST00000021120 Chpf2Q3UU43 768 aa25.39■■□□□ 1.66
Trim47-201ENSMUST00000021120 PappaQ8R4K8 1624 aa25.39■■□□□ 1.65
Trim47-201ENSMUST00000021120 Msh6P54276 1358 aaKnown RBP25.39■■□□□ 1.65
Trim47-201ENSMUST00000021120 Tnnt1O88346 262 aa25.39■■□□□ 1.65
Trim47-201ENSMUST00000021120 Col1a2Q01149 1372 aa25.38■■□□□ 1.65
Trim47-201ENSMUST00000021120 Nectin2P32507 530 aa25.38■■□□□ 1.65
Trim47-201ENSMUST00000021120 Eif4a1P60843 406 aaKnown RBP25.38■■□□□ 1.65
Trim47-201ENSMUST00000021120 Ankrd23Q812A3 306 aa25.38■■□□□ 1.65
Trim47-201ENSMUST00000021120 Atf5O70191 283 aa25.37■■□□□ 1.65
Trim47-201ENSMUST00000021120 Exoc5Q3TPX4 708 aa25.37■■□□□ 1.65
Trim47-201ENSMUST00000021120 Cyp2d12Q8BVD2 504 aa25.36■■□□□ 1.65
Trim47-201ENSMUST00000021120 Phlpp2Q8BXA7 1320 aa25.35■■□□□ 1.65
Trim47-201ENSMUST00000021120 Chl1P70232 1209 aa25.35■■□□□ 1.65
Trim47-201ENSMUST00000021120 Phf14Q9D4H9 881 aa25.34■■□□□ 1.65
Trim47-201ENSMUST00000021120 Vps33bP59016 617 aa25.33■■□□□ 1.65
Trim47-201ENSMUST00000021120 Hs1bp3Q3TC93 395 aa25.33■■□□□ 1.65
Trim47-201ENSMUST00000021120 Ddb1Q3U1J4 1140 aaKnown RBP25.33■■□□□ 1.65
Trim47-201ENSMUST00000021120 Kif20aP97329 887 aa25.32■■□□□ 1.64
Trim47-201ENSMUST00000021120 Fbxo41Q6NS60 873 aa25.32■■□□□ 1.64
Trim47-201ENSMUST00000021120 Fnbp4Q6ZQ03 1031 aa25.32■■□□□ 1.64
Trim47-201ENSMUST00000021120 Q3UPC7 1272 aa25.31■■□□□ 1.64
Trim47-201ENSMUST00000021120 ApobrQ8VBT6 942 aa25.31■■□□□ 1.64
Trim47-201ENSMUST00000021120 Znf330Q922H9 316 aa25.31■■□□□ 1.64
Trim47-201ENSMUST00000021120 Ltbp1Q8CG19 1712 aa25.3■■□□□ 1.64
Trim47-201ENSMUST00000021120 Ccnl1Q52KE7 532 aaKnown RBP25.3■■□□□ 1.64
Trim47-201ENSMUST00000021120 MarsQ68FL6 902 aaKnown RBP25.3■■□□□ 1.64
Trim47-201ENSMUST00000021120 Sgsm1Q8BPQ7 1093 aa25.3■■□□□ 1.64
Trim47-201ENSMUST00000021120 Aldh1l1Q8R0Y6 902 aa25.3■■□□□ 1.64
Trim47-201ENSMUST00000021120 Armcx1Q9CX83 456 aa25.29■■□□□ 1.64
Trim47-201ENSMUST00000021120 Sv2bQ8BG39 683 aa25.29■■□□□ 1.64
Trim47-201ENSMUST00000021120 Ints5Q8CHT3 1018 aa25.29■■□□□ 1.64
Trim47-201ENSMUST00000021120 Tjp1P39447 1745 aaKnown RBP25.29■■□□□ 1.64
Trim47-201ENSMUST00000021120 Crb1Q8VHS2 1405 aa25.28■■□□□ 1.64
Trim47-201ENSMUST00000021120 Fkbp4P30416 458 aa25.27■■□□□ 1.64
Trim47-201ENSMUST00000021120 GckrQ91X44 587 aa25.27■■□□□ 1.64
Trim47-201ENSMUST00000021120 Efcab2Q9CQ46 164 aa25.27■■□□□ 1.64
Trim47-201ENSMUST00000021120 Cypt2Q6P924 180 aa25.27■■□□□ 1.64
Trim47-201ENSMUST00000021120 Tiam2Q6ZPF3 1715 aa25.26■■□□□ 1.63
Trim47-201ENSMUST00000021120 ArxO35085 564 aa25.26■■□□□ 1.63
Trim47-201ENSMUST00000021120 Ppp1r3fQ9JIG4 799 aa25.26■■□□□ 1.63
Trim47-201ENSMUST00000021120 Pnmal2G3X9N3 661 aa25.25■■□□□ 1.63
Trim47-201ENSMUST00000021120 PsapQ61207 557 aaKnown RBP25.25■■□□□ 1.63
Retrieved 100 of 22,080 RNA–protein pairs in 397.2 ms