Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 AF201337.1-201ENST00000520239 748 ntBASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 AC105036.2-201ENST00000569468 176 ntBASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 AL121829.2-201ENST00000620908 328 ntBASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 GNAS-203ENST00000306120 1878 ntBASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM56-RWDD3S4R434 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
TMEM56-RWDD3S4R434 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 MYC-208ENST00000641036 567 ntBASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.39■□□□□ 0.05
TMEM56-RWDD3S4R434 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 RCC2P6-201ENST00000526625 1557 ntBASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 AL160286.2-201ENST00000567150 934 ntBASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 AC135776.1-201ENST00000319817 2481 ntBASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEM56-RWDD3S4R434 MTMR9LP-203ENST00000426597 1545 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms