Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.19■□□□□ 0.5
KRT78Q8N1N4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 MFAP1P1-201ENST00000442257 1255 ntBASIC18.18■□□□□ 0.5
KRT78Q8N1N4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 KRT17P2-201ENST00000300992 1314 ntBASIC18.18■□□□□ 0.5
KRT78Q8N1N4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
KRT78Q8N1N4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 UNC93B2-201ENST00000285383 730 ntBASIC18.17■□□□□ 0.5
KRT78Q8N1N4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 TSPY7P-201ENST00000431358 1114 ntBASIC18.17■□□□□ 0.5
KRT78Q8N1N4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.17■□□□□ 0.5
KRT78Q8N1N4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 SNORA78-201ENST00000459373 127 ntBASIC18.16■□□□□ 0.5
KRT78Q8N1N4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KRT78Q8N1N4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.15■□□□□ 0.5
KRT78Q8N1N4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KRT78Q8N1N4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
KRT78Q8N1N4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
KRT78Q8N1N4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT78Q8N1N4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT78Q8N1N4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT78Q8N1N4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KRT78Q8N1N4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.15■□□□□ 0.5
KRT78Q8N1N4 CRYGFP-201ENST00000418459 633 ntBASIC18.15■□□□□ 0.5
KRT78Q8N1N4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.15■□□□□ 0.5
KRT78Q8N1N4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms