Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MIR3657-201ENST00000584818 117 ntBASIC1.91□□□□□ -2.1
USB1Q9BQ65 AC104984.5-201ENST00000586878 94 ntBASIC1.91□□□□□ -2.1
USB1Q9BQ65 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
USB1Q9BQ65 RNU6-260P-201ENST00000384092 107 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 RNU6V-201ENST00000384105 107 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 MIR633-201ENST00000384821 98 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 MIR644A-201ENST00000385262 94 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 SNORD12-201ENST00000391002 90 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 RNU7-74P-201ENST00000459104 62 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 snoU13.26-201ENST00000459452 105 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 AC002350.1-201ENST00000490759 375 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 RNU6-542P-201ENST00000516405 103 ntBASIC1.9□□□□□ -2.11
USB1Q9BQ65 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
USB1Q9BQ65 MIR1261-201ENST00000408659 82 ntBASIC1.89□□□□□ -2.11
USB1Q9BQ65 RNU6-135P-201ENST00000516769 101 ntBASIC1.89□□□□□ -2.11
USB1Q9BQ65 SNORD114-1-201ENST00000362705 72 ntBASIC1.88□□□□□ -2.11
USB1Q9BQ65 Y_RNA.375-201ENST00000365625 101 ntBASIC1.88□□□□□ -2.11
USB1Q9BQ65 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USB1Q9BQ65 SNORD42B-201ENST00000458893 67 ntBASIC1.88□□□□□ -2.11
USB1Q9BQ65 RNU6-645P-201ENST00000364649 106 ntBASIC1.87□□□□□ -2.11
USB1Q9BQ65 MIR7-2-201ENST00000384970 110 ntBASIC1.87□□□□□ -2.11
USB1Q9BQ65 MIR222-201ENST00000384992 110 ntBASIC1.87□□□□□ -2.11
USB1Q9BQ65 MIR504-201ENST00000385065 83 ntBASIC1.87□□□□□ -2.11
USB1Q9BQ65 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.87□□□□□ -2.11
USB1Q9BQ65 RNU6-614P-201ENST00000384369 107 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 AC002429.1-201ENST00000437672 148 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 AC079150.2-201ENST00000443733 78 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 RNU6-469P-201ENST00000516253 101 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 MIR4639-201ENST00000584938 69 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 U6.59-201ENST00000615686 107 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 AC092634.7-201ENST00000621022 103 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 AC244669.1-204ENST00000621564 178 ntBASIC1.86□□□□□ -2.11
USB1Q9BQ65 SNORA7.1-201ENST00000363750 139 ntBASIC1.85□□□□□ -2.11
USB1Q9BQ65 SNORD41.1-201ENST00000391000 69 ntBASIC1.85□□□□□ -2.11
USB1Q9BQ65 AC025033.1-201ENST00000463883 194 ntBASIC1.85□□□□□ -2.11
USB1Q9BQ65 RNA5SP182-201ENST00000516064 82 ntBASIC1.85□□□□□ -2.11
USB1Q9BQ65 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.85□□□□□ -2.11
USB1Q9BQ65 SNORD28-201ENST00000384706 75 ntBASIC1.84□□□□□ -2.11
USB1Q9BQ65 MIR548L-201ENST00000408303 86 ntBASIC1.84□□□□□ -2.11
USB1Q9BQ65 MIR5002-201ENST00000584713 97 ntBASIC1.84□□□□□ -2.11
USB1Q9BQ65 SNORA64-201ENST00000384674 134 ntBASIC1.83□□□□□ -2.12
USB1Q9BQ65 RNU6-141P-201ENST00000410499 105 ntBASIC1.83□□□□□ -2.12
USB1Q9BQ65 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USB1Q9BQ65 SNORA2.1-201ENST00000363089 137 ntBASIC1.82□□□□□ -2.12
USB1Q9BQ65 SNORD89-201ENST00000390981 114 ntBASIC1.82□□□□□ -2.12
USB1Q9BQ65 MIR4460-201ENST00000577862 86 ntBASIC1.82□□□□□ -2.12
USB1Q9BQ65 MIR6715A-201ENST00000615929 79 ntBASIC1.82□□□□□ -2.12
USB1Q9BQ65 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
USB1Q9BQ65 MT-TY-201ENST00000387409 66 ntBASIC1.81□□□□□ -2.12
USB1Q9BQ65 RNA5SP147-201ENST00000516493 109 ntBASIC1.81□□□□□ -2.12
USB1Q9BQ65 SNORA25.5-201ENST00000363782 126 ntBASIC1.8□□□□□ -2.12
USB1Q9BQ65 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
USB1Q9BQ65 RNU6-1110P-201ENST00000516462 101 ntBASIC1.8□□□□□ -2.12
USB1Q9BQ65 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
USB1Q9BQ65 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
USB1Q9BQ65 RNU6-990P-201ENST00000364385 104 ntBASIC1.79□□□□□ -2.12
USB1Q9BQ65 SNORD105-201ENST00000386910 85 ntBASIC1.79□□□□□ -2.12
USB1Q9BQ65 RNA5SP192-201ENST00000364404 120 ntBASIC1.78□□□□□ -2.12
USB1Q9BQ65 RNU6-726P-201ENST00000364680 107 ntBASIC1.78□□□□□ -2.12
USB1Q9BQ65 SNORA25-201ENST00000384384 134 ntBASIC1.78□□□□□ -2.12
USB1Q9BQ65 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
USB1Q9BQ65 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.78□□□□□ -2.12
USB1Q9BQ65 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
USB1Q9BQ65 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
USB1Q9BQ65 RNA5SP160-201ENST00000364866 120 ntBASIC1.77□□□□□ -2.13
USB1Q9BQ65 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.77□□□□□ -2.13
USB1Q9BQ65 SCARNA21.1-201ENST00000515996 128 ntBASIC1.77□□□□□ -2.13
USB1Q9BQ65 RNU6-656P-201ENST00000516785 107 ntBASIC1.77□□□□□ -2.13
USB1Q9BQ65 SNORA40.17-201ENST00000517256 115 ntBASIC1.77□□□□□ -2.13
USB1Q9BQ65 MIR7843-201ENST00000622274 79 ntBASIC1.77□□□□□ -2.13
USB1Q9BQ65 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.77□□□□□ -2.13
USB1Q9BQ65 RNU6-940P-201ENST00000363433 104 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 RNA5SP215-201ENST00000363440 122 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 SNORD18A-201ENST00000363753 72 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 RNU1-141P-201ENST00000364623 158 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 RNU6-716P-201ENST00000365621 103 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 RNA5SP299-201ENST00000391203 116 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 SNORA26.9-201ENST00000391322 122 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 FABP5P4-201ENST00000437203 171 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 RNA5SP47-201ENST00000517230 109 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 MIR466-201ENST00000580653 84 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 MIR6739-201ENST00000622461 75 ntBASIC1.76□□□□□ -2.13
USB1Q9BQ65 RNU6-829P-201ENST00000363700 112 ntBASIC1.75□□□□□ -2.13
USB1Q9BQ65 RNU6-1335P-201ENST00000365426 107 ntBASIC1.75□□□□□ -2.13
USB1Q9BQ65 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
USB1Q9BQ65 snoU13.23-201ENST00000458863 104 ntBASIC1.75□□□□□ -2.13
USB1Q9BQ65 U7.7-201ENST00000459276 60 ntBASIC1.75□□□□□ -2.13
USB1Q9BQ65 RNA5SP327-201ENST00000362494 101 ntBASIC1.74□□□□□ -2.13
USB1Q9BQ65 RNU6-1079P-201ENST00000362861 110 ntBASIC1.74□□□□□ -2.13
USB1Q9BQ65 SNORD114-4-201ENST00000363962 75 ntBASIC1.74□□□□□ -2.13
USB1Q9BQ65 MIR583-201ENST00000384846 75 ntBASIC1.74□□□□□ -2.13
USB1Q9BQ65 AC108210.2-201ENST00000503681 201 ntBASIC1.74□□□□□ -2.13
USB1Q9BQ65 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.74□□□□□ -2.13
USB1Q9BQ65 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
USB1Q9BQ65 RNU6-1089P-201ENST00000516473 104 ntBASIC1.73□□□□□ -2.13
USB1Q9BQ65 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.73□□□□□ -2.13
USB1Q9BQ65 AC018659.1-201ENST00000551083 169 ntBASIC1.73□□□□□ -2.13
USB1Q9BQ65 MIR3678-201ENST00000578455 94 ntBASIC1.73□□□□□ -2.13
USB1Q9BQ65 MIR4285-201ENST00000581001 85 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 238.9 ms