Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.42□□□□□ -2.18
BHLHA9Q7RTU4 SNORA44.1-201ENST00000517031 108 ntBASIC1.42□□□□□ -2.18
BHLHA9Q7RTU4 MIR5094-201ENST00000578766 85 ntBASIC1.42□□□□□ -2.18
BHLHA9Q7RTU4 MIR4781-201ENST00000585250 76 ntBASIC1.42□□□□□ -2.18
BHLHA9Q7RTU4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.42□□□□□ -2.18
BHLHA9Q7RTU4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.42□□□□□ -2.18
BHLHA9Q7RTU4 SNORD38B-202ENST00000625943 69 ntBASIC1.42□□□□□ -2.18
BHLHA9Q7RTU4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.42□□□□□ -2.18
BHLHA9Q7RTU4 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 RNU6-940P-201ENST00000363433 104 ntBASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 RNU6-753P-201ENST00000363926 107 ntBASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 MIR588-201ENST00000384900 83 ntBASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 RNU1-123P-201ENST00000458950 160 ntBASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 RNU6-122P-201ENST00000516818 107 ntBASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 RNU6-980P-201ENST00000516925 103 ntBASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 SNORA40.17-201ENST00000517256 115 ntBASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 AC068338.1-201ENST00000565567 176 ntBASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 MIR3198-2-201ENST00000577868 80 ntBASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 MIR3938-201ENST00000582157 103 ntBASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 MIR548AD-201ENST00000584780 82 ntBASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 MIR3660-201ENST00000584845 100 ntBASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 AC106800.4-201ENST00000614905 153 ntBASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
BHLHA9Q7RTU4 AC023934.1-201ENST00000574529 2389 ntBASIC1.4□□□□□ -2.19
BHLHA9Q7RTU4 Y_RNA.239-201ENST00000364444 113 ntBASIC1.4□□□□□ -2.19
BHLHA9Q7RTU4 MIR30A-201ENST00000385092 71 ntBASIC1.4□□□□□ -2.19
BHLHA9Q7RTU4 RPS27P16-201ENST00000425758 201 ntBASIC1.4□□□□□ -2.19
BHLHA9Q7RTU4 RNU7-43P-201ENST00000516554 64 ntBASIC1.4□□□□□ -2.19
BHLHA9Q7RTU4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.4□□□□□ -2.19
BHLHA9Q7RTU4 MIR4491-201ENST00000581087 68 ntBASIC1.4□□□□□ -2.19
BHLHA9Q7RTU4 AC005786.1-201ENST00000588553 154 ntBASIC1.4□□□□□ -2.19
BHLHA9Q7RTU4 AL513423.1-201ENST00000621695 132 ntBASIC1.4□□□□□ -2.19
BHLHA9Q7RTU4 MIR4251-201ENST00000635819 61 ntBASIC1.4□□□□□ -2.19
BHLHA9Q7RTU4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.4□□□□□ -2.19
BHLHA9Q7RTU4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
BHLHA9Q7RTU4 SNORA7.1-201ENST00000363750 139 ntBASIC1.39□□□□□ -2.19
BHLHA9Q7RTU4 SNORD101-201ENST00000384027 73 ntBASIC1.39□□□□□ -2.19
BHLHA9Q7RTU4 MIR519A1-201ENST00000385257 85 ntBASIC1.39□□□□□ -2.19
BHLHA9Q7RTU4 MIR934-201ENST00000401241 83 ntBASIC1.39□□□□□ -2.19
BHLHA9Q7RTU4 SNORD100-201ENST00000408573 76 ntBASIC1.39□□□□□ -2.19
BHLHA9Q7RTU4 snoU13.25-201ENST00000458945 104 ntBASIC1.39□□□□□ -2.19
BHLHA9Q7RTU4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.39□□□□□ -2.19
BHLHA9Q7RTU4 MIR4285-201ENST00000581001 85 ntBASIC1.39□□□□□ -2.19
BHLHA9Q7RTU4 SNORA4-201ENST00000584302 138 ntBASIC1.39□□□□□ -2.19
BHLHA9Q7RTU4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.39□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-1260P-201ENST00000362944 107 ntBASIC1.38□□□□□ -2.19
BHLHA9Q7RTU4 Y_RNA.379-201ENST00000365653 102 ntBASIC1.38□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-997P-201ENST00000384725 107 ntBASIC1.38□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-1177P-201ENST00000391058 104 ntBASIC1.38□□□□□ -2.19
BHLHA9Q7RTU4 AC004965.1-201ENST00000413033 213 ntBASIC1.38□□□□□ -2.19
BHLHA9Q7RTU4 AC244098.3-201ENST00000424803 96 ntBASIC1.38□□□□□ -2.19
BHLHA9Q7RTU4 RNA5SP147-201ENST00000516493 109 ntBASIC1.38□□□□□ -2.19
BHLHA9Q7RTU4 RNU1-92P-201ENST00000517017 135 ntBASIC1.38□□□□□ -2.19
BHLHA9Q7RTU4 SUB1P4-201ENST00000566062 339 ntBASIC1.38□□□□□ -2.19
BHLHA9Q7RTU4 MIR4773-1-201ENST00000637203 78 ntBASIC1.38□□□□□ -2.19
BHLHA9Q7RTU4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.37□□□□□ -2.19
BHLHA9Q7RTU4 MIR424-201ENST00000362227 98 ntBASIC1.37□□□□□ -2.19
BHLHA9Q7RTU4 SNORD60.1-201ENST00000362451 73 ntBASIC1.37□□□□□ -2.19
BHLHA9Q7RTU4 RNY4P3-201ENST00000365254 95 ntBASIC1.37□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-203P-201ENST00000384038 104 ntBASIC1.37□□□□□ -2.19
BHLHA9Q7RTU4 Y_RNA.536-201ENST00000384621 113 ntBASIC1.37□□□□□ -2.19
BHLHA9Q7RTU4 MIR520C-201ENST00000385005 87 ntBASIC1.37□□□□□ -2.19
BHLHA9Q7RTU4 MIR451A-201ENST00000385059 72 ntBASIC1.37□□□□□ -2.19
BHLHA9Q7RTU4 RNA5SP299-201ENST00000391203 116 ntBASIC1.37□□□□□ -2.19
BHLHA9Q7RTU4 MIR548F3-201ENST00000408509 87 ntBASIC1.37□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.37□□□□□ -2.19
BHLHA9Q7RTU4 SNORA31.17-201ENST00000516953 127 ntBASIC1.37□□□□□ -2.19
BHLHA9Q7RTU4 MIR3192-201ENST00000584920 77 ntBASIC1.37□□□□□ -2.19
BHLHA9Q7RTU4 AL078603.1-201ENST00000603824 313 ntBASIC1.37□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-668P-201ENST00000364180 107 ntBASIC1.36□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-439P-201ENST00000384188 106 ntBASIC1.36□□□□□ -2.19
BHLHA9Q7RTU4 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-1165P-201ENST00000410119 107 ntBASIC1.36□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-1265P-201ENST00000516342 103 ntBASIC1.36□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-654P-201ENST00000364373 107 ntBASIC1.35□□□□□ -2.19
BHLHA9Q7RTU4 Y_RNA.355-201ENST00000365462 98 ntBASIC1.35□□□□□ -2.19
BHLHA9Q7RTU4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-935P-201ENST00000410371 100 ntBASIC1.35□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-321P-201ENST00000410912 106 ntBASIC1.35□□□□□ -2.19
BHLHA9Q7RTU4 Y_RNA.809-201ENST00000516058 95 ntBASIC1.35□□□□□ -2.19
BHLHA9Q7RTU4 AC013244.2-201ENST00000603396 103 ntBASIC1.35□□□□□ -2.19
BHLHA9Q7RTU4 AL359821.1-201ENST00000605519 182 ntBASIC1.35□□□□□ -2.19
BHLHA9Q7RTU4 MIR8074-201ENST00000615081 81 ntBASIC1.35□□□□□ -2.19
BHLHA9Q7RTU4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-112P-201ENST00000363599 104 ntBASIC1.34□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-645P-201ENST00000364649 106 ntBASIC1.34□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-1039P-201ENST00000383931 107 ntBASIC1.34□□□□□ -2.19
BHLHA9Q7RTU4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-752P-201ENST00000516376 102 ntBASIC1.34□□□□□ -2.19
BHLHA9Q7RTU4 RNU6-656P-201ENST00000516785 107 ntBASIC1.34□□□□□ -2.19
BHLHA9Q7RTU4 AC019176.1-201ENST00000518519 225 ntBASIC1.34□□□□□ -2.19
BHLHA9Q7RTU4 NAMPTP3-201ENST00000569273 224 ntBASIC1.34□□□□□ -2.19
BHLHA9Q7RTU4 AL353770.2-201ENST00000620024 78 ntBASIC1.34□□□□□ -2.19
BHLHA9Q7RTU4 AC073869.9-201ENST00000641610 120 ntBASIC1.34□□□□□ -2.19
BHLHA9Q7RTU4 MIR203A-201ENST00000384836 110 ntBASIC1.33□□□□□ -2.2
BHLHA9Q7RTU4 MIR653-201ENST00000385279 96 ntBASIC1.33□□□□□ -2.2
BHLHA9Q7RTU4 RNU6-274P-201ENST00000459566 107 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 214.6 ms