RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CHIC1Q5VXU3 224 aa8.24□□□□□ -1.09
HIF1A-212ENST00000557538 AEBP2Q6ZN18 517 aaPredicted RBP8.22□□□□□ -1.09
HIF1A-212ENST00000557538 PHF23Q9BUL5 403 aaPredicted RBP7.22□□□□□ -1.25
HIF1A-212ENST00000557538 SENP3Q9H4L4 574 aaPredicted RBP7.01□□□□□ -1.29
HIF1A-212ENST00000557538 PLPPR3Q6T4P5 718 aa6.73□□□□□ -1.33
HIF1A-212ENST00000557538 FOXD1Q16676 465 aa6.43□□□□□ -1.38
HIF1A-212ENST00000557538 PPP6R1Q9UPN7 881 aa6.25□□□□□ -1.41
HIF1A-212ENST00000557538 ADRA2BP18089 450 aa6.22□□□□□ -1.41
HIF1A-212ENST00000557538 PIAS4Q8N2W9 510 aaPredicted RBP6.03□□□□□ -1.44
HIF1A-212ENST00000557538 MSH5O43196 834 aa5.95□□□□□ -1.46
HIF1A-212ENST00000557538 POTEDQ86YR6 584 aa5.94□□□□□ -1.46
HIF1A-212ENST00000557538 PPP4R3CPQ6ZMV5 832 aa5.91□□□□□ -1.46
HIF1A-212ENST00000557538 KCNA4P22459 653 aa5.87□□□□□ -1.47
HIF1A-212ENST00000557538 DNAJC5BQ9UF47 199 aa5.85□□□□□ -1.47
HIF1A-212ENST00000557538 NCBP3Q53F19 620 aaKnown RBP5.84□□□□□ -1.47
HIF1A-212ENST00000557538 SCAF1Q9H7N4 1312 aaKnown RBP5.81□□□□□ -1.48
HIF1A-212ENST00000557538 CNKSR2Q8WXI2 1034 aa5.77□□□□□ -1.49
HIF1A-212ENST00000557538 NPM3O75607 178 aaKnown RBP5.71□□□□□ -1.49
HIF1A-212ENST00000557538 RNF216Q9NWF9 866 aaPredicted RBP5.66□□□□□ -1.5
HIF1A-212ENST00000557538 DMRT2Q9Y5R5 561 aa5.65□□□□□ -1.51
HIF1A-212ENST00000557538 SLC4A1APQ9BWU0 796 aaKnown RBP5.63□□□□□ -1.51
HIF1A-212ENST00000557538 HOXD11P31277 338 aaPredicted RBP5.62□□□□□ -1.51
HIF1A-212ENST00000557538 MAPK8IP2Q13387 824 aaPredicted RBP5.58□□□□□ -1.52
HIF1A-212ENST00000557538 CSRNP3Q8WYN3 585 aa5.53□□□□□ -1.52
HIF1A-212ENST00000557538 EHMT2Q96KQ7 1210 aa5.46□□□□□ -1.53
HIF1A-212ENST00000557538 ZBTB22O15209 634 aa5.44□□□□□ -1.54
HIF1A-212ENST00000557538 FOXD4L1Q9NU39 408 aa5.44□□□□□ -1.54
HIF1A-212ENST00000557538 SLC4A2P04920 1241 aa5.38□□□□□ -1.55
HIF1A-212ENST00000557538 ATXN8OSP0DMR3 200 aa5.37□□□□□ -1.55
HIF1A-212ENST00000557538 MYCNP04198 464 aaPredicted RBP5.31□□□□□ -1.56
HIF1A-212ENST00000557538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.23□□□□□ -1.57
HIF1A-212ENST00000557538 HNRNPUL2Q1KMD3 747 aaKnown RBP5.23□□□□□ -1.57
HIF1A-212ENST00000557538 SAMD1Q6SPF0 538 aaPredicted RBP5.2□□□□□ -1.58
HIF1A-212ENST00000557538 U3KPZ7 1027 aaPredicted RBP5.18□□□□□ -1.58
HIF1A-212ENST00000557538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.17□□□□□ -1.581e-6■■□□□ 14.1
HIF1A-212ENST00000557538 APLP2Q06481 763 aa5.17□□□□□ -1.58
HIF1A-212ENST00000557538 RNF39Q9H2S5 420 aa5.1□□□□□ -1.59
HIF1A-212ENST00000557538 DCAF8L1A6NGE4 600 aa5.1□□□□□ -1.59
HIF1A-212ENST00000557538 ATF5Q9Y2D1 282 aaPredicted RBP5.08□□□□□ -1.6
HIF1A-212ENST00000557538 C1QBPQ07021 282 aaKnown RBP5.07□□□□□ -1.6
HIF1A-212ENST00000557538 ZNF219Q9P2Y4 722 aaPredicted RBP5.04□□□□□ -1.6
HIF1A-212ENST00000557538 PROM2Q8N271 834 aa4.97□□□□□ -1.61
HIF1A-212ENST00000557538 ZBTB12Q9Y330 459 aaPredicted RBP4.94□□□□□ -1.62
HIF1A-212ENST00000557538 MKRN4PQ13434 485 aaPredicted RBP4.91□□□□□ -1.62
HIF1A-212ENST00000557538 SPINK5Q9NQ38 1064 aaPredicted RBP4.91□□□□□ -1.62
HIF1A-212ENST00000557538 FKBP8Q14318 412 aa4.89□□□□□ -1.63
HIF1A-212ENST00000557538 FBLN2P98095 1184 aa4.89□□□□□ -1.63
HIF1A-212ENST00000557538 DSG3P32926 999 aa4.87□□□□□ -1.63
HIF1A-212ENST00000557538 POLA2Q14181 598 aa4.85□□□□□ -1.63
HIF1A-212ENST00000557538 CAPN15O75808 1086 aa4.85□□□□□ -1.63
HIF1A-212ENST00000557538 SPDYE4A6NLX3 237 aa4.83□□□□□ -1.64
HIF1A-212ENST00000557538 AMER1Q5JTC6 1135 aaPredicted RBP4.83□□□□□ -1.64
HIF1A-212ENST00000557538 TRHP20396 242 aaPredicted RBP4.82□□□□□ -1.64
HIF1A-212ENST00000557538 FBXO3Q9UK99 471 aa4.82□□□□□ -1.64
HIF1A-212ENST00000557538 SSUH2Q9Y2M2 353 aa4.8□□□□□ -1.64
HIF1A-212ENST00000557538 SPDYE2BA6NHP3 402 aa4.78□□□□□ -1.64
HIF1A-212ENST00000557538 SPDYE6P0CI01 402 aa4.78□□□□□ -1.64
HIF1A-212ENST00000557538 SPDYE2Q495Y8 402 aa4.78□□□□□ -1.64
HIF1A-212ENST00000557538 STAG3Q9UJ98 1225 aa4.73□□□□□ -1.65
HIF1A-212ENST00000557538 ABCB7O75027 752 aa4.73□□□□□ -1.65
HIF1A-212ENST00000557538 CACNB1Q02641 598 aaPredicted RBP4.72□□□□□ -1.65
HIF1A-212ENST00000557538 VASPP50552 380 aaPredicted RBP4.7□□□□□ -1.66
HIF1A-212ENST00000557538 RTN4Q9NQC3 1192 aaKnown RBP4.7□□□□□ -1.66
HIF1A-212ENST00000557538 ZNF692Q9BU19 519 aaPredicted RBP4.68□□□□□ -1.66
HIF1A-212ENST00000557538 OSCARQ8IYS5 282 aa4.67□□□□□ -1.66
HIF1A-212ENST00000557538 AKT1S1Q96B36 256 aa4.65□□□□□ -1.66
HIF1A-212ENST00000557538 RBM42Q9BTD8 480 aaKnown RBP4.65□□□□□ -1.67
HIF1A-212ENST00000557538 IFNLR1Q8IU57 520 aaPredicted RBP4.64□□□□□ -1.67
HIF1A-212ENST00000557538 PABPN1Q86U42 306 aaKnown RBP eCLIP4.61□□□□□ -1.67
HIF1A-212ENST00000557538 SPOCK2Q92563 424 aa4.59□□□□□ -1.67
HIF1A-212ENST00000557538 ZBTB47Q9UFB7 747 aaPredicted RBP4.59□□□□□ -1.68
HIF1A-212ENST00000557538 SPDYE1Q8NFV5 336 aaPredicted RBP4.57□□□□□ -1.68
HIF1A-212ENST00000557538 TRIM41Q8WV44 630 aa4.56□□□□□ -1.68
HIF1A-212ENST00000557538 PKD2Q13563 968 aa4.56□□□□□ -1.68
HIF1A-212ENST00000557538 REM2Q8IYK8 340 aaPredicted RBP4.55□□□□□ -1.68
HIF1A-212ENST00000557538 DNAJC5Q9H3Z4 198 aa4.54□□□□□ -1.68
HIF1A-212ENST00000557538 MNX1P50219 401 aaPredicted RBP4.52□□□□□ -1.69
HIF1A-212ENST00000557538 CHRM1P11229 460 aaPredicted RBP4.52□□□□□ -1.69
HIF1A-212ENST00000557538 CREBZFQ9NS37 354 aa4.52□□□□□ -1.69
HIF1A-212ENST00000557538 PLEKHG5O94827 1062 aa4.51□□□□□ -1.69
HIF1A-212ENST00000557538 NUBP1P53384 320 aa4.51□□□□□ -1.69
HIF1A-212ENST00000557538 SLC24A1O60721 1099 aa4.5□□□□□ -1.69
HIF1A-212ENST00000557538 MIER1Q8N108 512 aa4.49□□□□□ -1.69
HIF1A-212ENST00000557538 GSE1Q14687 1217 aa4.49□□□□□ -1.69
HIF1A-212ENST00000557538 POTEHQ6S545 545 aa4.49□□□□□ -1.69
HIF1A-212ENST00000557538 PLCD3Q8N3E9 789 aa4.49□□□□□ -1.69
HIF1A-212ENST00000557538 SGIP1Q9BQI5 828 aa4.49□□□□□ -1.69
HIF1A-212ENST00000557538 PITPNM1O00562 1244 aa4.47□□□□□ -1.69
HIF1A-212ENST00000557538 KLHL34Q8N239 644 aa4.46□□□□□ -1.7
HIF1A-212ENST00000557538 PRR29P0C7W0 189 aa4.45□□□□□ -1.7
HIF1A-212ENST00000557538 FXR2P51116 673 aaKnown RBP eCLIP4.45□□□□□ -1.74e-8■■□□□ 11.4
HIF1A-212ENST00000557538 BBXQ8WY36 941 aaPredicted RBP4.45□□□□□ -1.7
HIF1A-212ENST00000557538 NPM1P06748 294 aaKnown RBP eCLIP4.44□□□□□ -1.7
HIF1A-212ENST00000557538 ECM2O94769 699 aaPredicted RBP4.43□□□□□ -1.7
HIF1A-212ENST00000557538 PLCB2Q00722 1185 aa4.43□□□□□ -1.7
HIF1A-212ENST00000557538 TAOK2Q9UL54 1235 aa4.42□□□□□ -1.7
HIF1A-212ENST00000557538 HS6ST3Q8IZP7 471 aa4.41□□□□□ -1.7
HIF1A-212ENST00000557538 RGL2O15211 777 aa4.4□□□□□ -1.71
HIF1A-212ENST00000557538 FAM212AQ96EL1 285 aa4.39□□□□□ -1.71
HIF1A-212ENST00000557538 RIOK3O14730 519 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms