RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 POTEDQ86YR6 584 aa8.66□□□□□ -1.02
MIR548F3-201ENST00000408509 AEBP2Q6ZN18 517 aaPredicted RBP7.41□□□□□ -1.22
MIR548F3-201ENST00000408509 CHIC1Q5VXU3 224 aa6.87□□□□□ -1.31
MIR548F3-201ENST00000408509 POTEHQ6S545 545 aa6.51□□□□□ -1.37
MIR548F3-201ENST00000408509 SENP3Q9H4L4 574 aaPredicted RBP6.5□□□□□ -1.37
MIR548F3-201ENST00000408509 CACNB1Q02641 598 aaPredicted RBP6.42□□□□□ -1.38
MIR548F3-201ENST00000408509 MSH5O43196 834 aa6.36□□□□□ -1.39
MIR548F3-201ENST00000408509 FOXD1Q16676 465 aa6.27□□□□□ -1.41
MIR548F3-201ENST00000408509 PHF23Q9BUL5 403 aaPredicted RBP6.26□□□□□ -1.41
MIR548F3-201ENST00000408509 PLSCR2Q9NRY7 297 aa6.11□□□□□ -1.43
MIR548F3-201ENST00000408509 PIAS4Q8N2W9 510 aaPredicted RBP5.56□□□□□ -1.52
MIR548F3-201ENST00000408509 SP7Q8TDD2 431 aaPredicted RBP5.43□□□□□ -1.54
MIR548F3-201ENST00000408509 RNF39Q9H2S5 420 aa5.3□□□□□ -1.56
MIR548F3-201ENST00000408509 C1QBPQ07021 282 aaKnown RBP5.12□□□□□ -1.59
MIR548F3-201ENST00000408509 LHX8Q68G74 356 aa5.1□□□□□ -1.59
MIR548F3-201ENST00000408509 DCAF8L1A6NGE4 600 aa4.99□□□□□ -1.61
MIR548F3-201ENST00000408509 DMRT2Q9Y5R5 561 aa4.92□□□□□ -1.62
MIR548F3-201ENST00000408509 POTEMA6NI47 508 aa4.91□□□□□ -1.62
MIR548F3-201ENST00000408509 POTEGQ6S5H5 508 aa4.83□□□□□ -1.64
MIR548F3-201ENST00000408509 CHRDL2Q6WN34 429 aa4.83□□□□□ -1.64
MIR548F3-201ENST00000408509 MAPK8IP2Q13387 824 aaPredicted RBP4.8□□□□□ -1.64
MIR548F3-201ENST00000408509 PPP6R1Q9UPN7 881 aa4.8□□□□□ -1.64
MIR548F3-201ENST00000408509 HAX1O00165 279 aa4.79□□□□□ -1.64
MIR548F3-201ENST00000408509 PCDH10Q9P2E7 1040 aa4.78□□□□□ -1.64
MIR548F3-201ENST00000408509 ADRA2BP18089 450 aa4.74□□□□□ -1.65
MIR548F3-201ENST00000408509 EVX2Q03828 476 aa4.58□□□□□ -1.68
MIR548F3-201ENST00000408509 DSG3P32926 999 aa4.51□□□□□ -1.69
MIR548F3-201ENST00000408509 PIP4P2Q8N4L2 257 aa4.42□□□□□ -1.7
MIR548F3-201ENST00000408509 GABBR2O75899 941 aa4.38□□□□□ -1.71
MIR548F3-201ENST00000408509 OTUD5Q96G74 571 aa4.37□□□□□ -1.71
MIR548F3-201ENST00000408509 MMRN1Q13201 1228 aa4.35□□□□□ -1.71
MIR548F3-201ENST00000408509 CDAN1Q8IWY9 1227 aa4.32□□□□□ -1.72
MIR548F3-201ENST00000408509 RBM42Q9BTD8 480 aaKnown RBP4.32□□□□□ -1.72
MIR548F3-201ENST00000408509 CAPN15O75808 1086 aa4.3□□□□□ -1.72
MIR548F3-201ENST00000408509 SCAF1Q9H7N4 1312 aaKnown RBP4.26□□□□□ -1.73
MIR548F3-201ENST00000408509 POTEIP0CG38 1075 aa4.26□□□□□ -1.73
MIR548F3-201ENST00000408509 FAM163AQ96GL9 167 aaPredicted RBP4.25□□□□□ -1.73
MIR548F3-201ENST00000408509 LCE2DQ5TA82 110 aaPredicted RBP4.24□□□□□ -1.73
MIR548F3-201ENST00000408509 SPNS2Q8IVW8 549 aa4.21□□□□□ -1.74
MIR548F3-201ENST00000408509 SPINK5Q9NQ38 1064 aaPredicted RBP4.21□□□□□ -1.74
MIR548F3-201ENST00000408509 DNAJC5BQ9UF47 199 aa4.18□□□□□ -1.74
MIR548F3-201ENST00000408509 HOXD11P31277 338 aaPredicted RBP4.16□□□□□ -1.74
MIR548F3-201ENST00000408509 POTEB2H3BUK9 544 aa4.11□□□□□ -1.75
MIR548F3-201ENST00000408509 ABCB7O75027 752 aa4.11□□□□□ -1.75
MIR548F3-201ENST00000408509 FXR2P51116 673 aaKnown RBP eCLIP4.11□□□□□ -1.75
MIR548F3-201ENST00000408509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.1□□□□□ -1.75
MIR548F3-201ENST00000408509 LOC100996750A0A140TA64 210 aa4.05□□□□□ -1.76
MIR548F3-201ENST00000408509 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
MIR548F3-201ENST00000408509 C19orf67A6NJJ6 358 aa4.04□□□□□ -1.76
MIR548F3-201ENST00000408509 DCBLD2Q96PD2 775 aa4□□□□□ -1.77
MIR548F3-201ENST00000408509 REM2Q8IYK8 340 aaPredicted RBP3.93□□□□□ -1.78
MIR548F3-201ENST00000408509 PITPNM1O00562 1244 aa3.92□□□□□ -1.78
MIR548F3-201ENST00000408509 AKT1S1Q96B36 256 aa3.92□□□□□ -1.78
MIR548F3-201ENST00000408509 TRHP20396 242 aaPredicted RBP3.91□□□□□ -1.78
MIR548F3-201ENST00000408509 PLPPR3Q6T4P5 718 aa3.87□□□□□ -1.79
MIR548F3-201ENST00000408509 PRKAR2AP13861 404 aaKnown RBP3.83□□□□□ -1.8
MIR548F3-201ENST00000408509 POTEJP0CG39 1038 aa3.8□□□□□ -1.8
MIR548F3-201ENST00000408509 MAMSTRQ6ZN01 415 aa3.8□□□□□ -1.8
MIR548F3-201ENST00000408509 U3KPZ7 1027 aaPredicted RBP3.79□□□□□ -1.8
MIR548F3-201ENST00000408509 RNF216Q9NWF9 866 aaPredicted RBP3.77□□□□□ -1.81
MIR548F3-201ENST00000408509 SCUBE2Q9NQ36 999 aa3.74□□□□□ -1.81
MIR548F3-201ENST00000408509 ZNF219Q9P2Y4 722 aaPredicted RBP3.73□□□□□ -1.81
MIR548F3-201ENST00000408509 ST18O60284 1047 aa3.71□□□□□ -1.82
MIR548F3-201ENST00000408509 CLCN6P51797 869 aa3.68□□□□□ -1.82
MIR548F3-201ENST00000408509 RNF166Q96A37 237 aaPredicted RBP3.64□□□□□ -1.83
MIR548F3-201ENST00000408509 CD44P16070 742 aaKnown RBP3.62□□□□□ -1.83
MIR548F3-201ENST00000408509 PELP1Q8IZL8 1130 aaKnown RBP3.61□□□□□ -1.83
MIR548F3-201ENST00000408509 METRNQ9UJH8 293 aa3.61□□□□□ -1.83
MIR548F3-201ENST00000408509 KRTAP3-3Q9BYR6 98 aa3.59□□□□□ -1.83
MIR548F3-201ENST00000408509 KRTAP3-2Q9BYR7 98 aa3.59□□□□□ -1.83
MIR548F3-201ENST00000408509 IRX2Q9BZI1 471 aaPredicted RBP3.58□□□□□ -1.84
MIR548F3-201ENST00000408509 GALR2O43603 387 aaPredicted RBP3.56□□□□□ -1.84
MIR548F3-201ENST00000408509 MARVELD3Q96A59 401 aa3.56□□□□□ -1.84
MIR548F3-201ENST00000408509 CHADLQ6NUI6 762 aa3.53□□□□□ -1.84
MIR548F3-201ENST00000408509 SUZ12Q15022 739 aaKnown RBP3.52□□□□□ -1.85
MIR548F3-201ENST00000408509 KRTAP1-3Q8IUG1 177 aa3.52□□□□□ -1.85
MIR548F3-201ENST00000408509 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.49□□□□□ -1.85
MIR548F3-201ENST00000408509 APLP2Q06481 763 aa3.49□□□□□ -1.85
MIR548F3-201ENST00000408509 PLA2G2EQ9NZK7 142 aa3.49□□□□□ -1.85
MIR548F3-201ENST00000408509 C7P10643 843 aa3.48□□□□□ -1.85
MIR548F3-201ENST00000408509 SLC39A7Q92504 469 aa3.48□□□□□ -1.85
MIR548F3-201ENST00000408509 CNKSR2Q8WXI2 1034 aa3.47□□□□□ -1.85
MIR548F3-201ENST00000408509 TMEM121BQ9BXQ6 578 aaPredicted RBP3.47□□□□□ -1.85
MIR548F3-201ENST00000408509 KRTAP4-8Q9BYQ9 185 aa3.47□□□□□ -1.85
MIR548F3-201ENST00000408509 Q6ZNB5 142 aa3.46□□□□□ -1.86
MIR548F3-201ENST00000408509 MYT1LQ9UL68 1186 aa3.46□□□□□ -1.86
MIR548F3-201ENST00000408509 CLEC11AQ9Y240 323 aa3.46□□□□□ -1.86
MIR548F3-201ENST00000408509 KRTAP9-6A0A140TA67 174 aa3.45□□□□□ -1.86
MIR548F3-201ENST00000408509 KRTAP17-1Q9BYP8 105 aa3.45□□□□□ -1.86
MIR548F3-201ENST00000408509 KRTAP9-2Q9BYQ4 174 aa3.44□□□□□ -1.86
MIR548F3-201ENST00000408509 POLA2Q14181 598 aa3.43□□□□□ -1.86
MIR548F3-201ENST00000408509 ZNF579Q8NAF0 562 aaKnown RBP3.42□□□□□ -1.86
MIR548F3-201ENST00000408509 POTEB3A0JP26 581 aa3.39□□□□□ -1.87
MIR548F3-201ENST00000408509 POTEBQ6S5H4 581 aa3.39□□□□□ -1.87
MIR548F3-201ENST00000408509 OSCARQ8IYS5 282 aa3.39□□□□□ -1.87
MIR548F3-201ENST00000408509 SLAIN1Q8ND83 568 aa3.39□□□□□ -1.87
MIR548F3-201ENST00000408509 EMP3P54852 163 aa3.38□□□□□ -1.87
MIR548F3-201ENST00000408509 HS3ST6Q96QI5 342 aa3.38□□□□□ -1.87
MIR548F3-201ENST00000408509 ZRANB1Q9UGI0 708 aa3.37□□□□□ -1.87
MIR548F3-201ENST00000408509 FAM205CA6NFA0 338 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms