Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH20Q9HBT6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 FP475955.4-201ENST00000623131 1990 ntBASIC16.49■□□□□ 0.23
CDH20Q9HBT6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 AL390955.1-201ENST00000428694 934 ntBASIC16.49■□□□□ 0.23
CDH20Q9HBT6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 FITM1-202ENST00000559294 800 ntBASIC16.49■□□□□ 0.23
CDH20Q9HBT6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 C2orf69P3-201ENST00000565542 1120 ntBASIC16.49■□□□□ 0.23
CDH20Q9HBT6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 IRX1P1-201ENST00000438849 1838 ntBASIC16.49■□□□□ 0.23
CDH20Q9HBT6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH20Q9HBT6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 FEM1AP3-201ENST00000403722 1741 ntBASIC16.48■□□□□ 0.23
CDH20Q9HBT6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.48■□□□□ 0.23
CDH20Q9HBT6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 MMP23A-201ENST00000234610 1017 ntBASIC16.48■□□□□ 0.23
CDH20Q9HBT6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 TSPY15P-201ENST00000457163 923 ntBASIC16.48■□□□□ 0.23
CDH20Q9HBT6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH20Q9HBT6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 BX088651.1-201ENST00000540551 451 ntBASIC16.47■□□□□ 0.23
CDH20Q9HBT6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH20Q9HBT6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms