Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RNU6-1190P-201ENST00000410811 104 ntBASIC1.8□□□□□ -2.12
CCDC85CA6NKD9 AC108081.1-201ENST00000604358 221 ntBASIC1.8□□□□□ -2.12
CCDC85CA6NKD9 Y_RNA.294-201ENST00000364916 102 ntBASIC1.79□□□□□ -2.12
CCDC85CA6NKD9 RNA5SP363-201ENST00000365072 115 ntBASIC1.79□□□□□ -2.12
CCDC85CA6NKD9 MIR193B-201ENST00000384907 83 ntBASIC1.79□□□□□ -2.12
CCDC85CA6NKD9 RNU6-717P-201ENST00000459076 104 ntBASIC1.79□□□□□ -2.12
CCDC85CA6NKD9 RNU6-240P-201ENST00000516098 97 ntBASIC1.79□□□□□ -2.12
CCDC85CA6NKD9 AC133485.4-201ENST00000561835 220 ntBASIC1.79□□□□□ -2.12
CCDC85CA6NKD9 AC138907.4-201ENST00000570107 226 ntBASIC1.79□□□□□ -2.12
CCDC85CA6NKD9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC85CA6NKD9 SNORA1.1-201ENST00000364671 133 ntBASIC1.78□□□□□ -2.12
CCDC85CA6NKD9 RNA5SP144-201ENST00000410846 116 ntBASIC1.78□□□□□ -2.12
CCDC85CA6NKD9 RNU7-45P-201ENST00000459460 63 ntBASIC1.78□□□□□ -2.12
CCDC85CA6NKD9 SNORA31.24-201ENST00000517232 57 ntBASIC1.78□□□□□ -2.12
CCDC85CA6NKD9 MIR1273G-201ENST00000577677 100 ntBASIC1.78□□□□□ -2.12
CCDC85CA6NKD9 RNA5SP62-201ENST00000363457 110 ntBASIC1.77□□□□□ -2.13
CCDC85CA6NKD9 Y_RNA.218-201ENST00000364218 104 ntBASIC1.77□□□□□ -2.13
CCDC85CA6NKD9 RNA5SP138-201ENST00000365098 114 ntBASIC1.77□□□□□ -2.13
CCDC85CA6NKD9 Y_RNA.366-201ENST00000365540 102 ntBASIC1.77□□□□□ -2.13
CCDC85CA6NKD9 MIR517C-201ENST00000385103 95 ntBASIC1.77□□□□□ -2.13
CCDC85CA6NKD9 MT-TN-201ENST00000387400 73 ntBASIC1.77□□□□□ -2.13
CCDC85CA6NKD9 RPS3AP1-201ENST00000413190 320 ntBASIC1.77□□□□□ -2.13
CCDC85CA6NKD9 AC025033.1-201ENST00000463883 194 ntBASIC1.77□□□□□ -2.13
CCDC85CA6NKD9 AC048334.1-201ENST00000477975 159 ntBASIC1.77□□□□□ -2.13
CCDC85CA6NKD9 SNORA31.2-201ENST00000516019 134 ntBASIC1.77□□□□□ -2.13
CCDC85CA6NKD9 HSPE1P19-201ENST00000603327 295 ntBASIC1.77□□□□□ -2.13
CCDC85CA6NKD9 AL137067.1-201ENST00000615933 120 ntBASIC1.77□□□□□ -2.13
CCDC85CA6NKD9 MIR8065-201ENST00000620577 100 ntBASIC1.77□□□□□ -2.13
CCDC85CA6NKD9 SNORA25.3-201ENST00000363205 127 ntBASIC1.76□□□□□ -2.13
CCDC85CA6NKD9 RNU6-396P-201ENST00000365369 105 ntBASIC1.76□□□□□ -2.13
CCDC85CA6NKD9 MIRLET7F2-201ENST00000385277 83 ntBASIC1.76□□□□□ -2.13
CCDC85CA6NKD9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CCDC85CA6NKD9 RNU6-602P-201ENST00000411155 105 ntBASIC1.76□□□□□ -2.13
CCDC85CA6NKD9 RNU6-1211P-201ENST00000459179 105 ntBASIC1.76□□□□□ -2.13
CCDC85CA6NKD9 MIR2115-201ENST00000516657 100 ntBASIC1.76□□□□□ -2.13
CCDC85CA6NKD9 MIR4305-201ENST00000583252 102 ntBASIC1.76□□□□□ -2.13
CCDC85CA6NKD9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.76□□□□□ -2.13
CCDC85CA6NKD9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CCDC85CA6NKD9 MIR377-201ENST00000362145 69 ntBASIC1.75□□□□□ -2.13
CCDC85CA6NKD9 MIR103A2-201ENST00000362154 78 ntBASIC1.75□□□□□ -2.13
CCDC85CA6NKD9 SNORA22.1-201ENST00000362701 134 ntBASIC1.75□□□□□ -2.13
CCDC85CA6NKD9 SNORD116-14-201ENST00000383894 92 ntBASIC1.75□□□□□ -2.13
CCDC85CA6NKD9 SNORD116-17-201ENST00000383929 92 ntBASIC1.75□□□□□ -2.13
CCDC85CA6NKD9 SNORD116-15-201ENST00000384445 92 ntBASIC1.75□□□□□ -2.13
CCDC85CA6NKD9 SNORD116-19-201ENST00000384729 92 ntBASIC1.75□□□□□ -2.13
CCDC85CA6NKD9 MIR1323-201ENST00000408090 73 ntBASIC1.75□□□□□ -2.13
CCDC85CA6NKD9 RNU6-613P-201ENST00000410412 108 ntBASIC1.75□□□□□ -2.13
CCDC85CA6NKD9 RNA5SP338-201ENST00000410495 85 ntBASIC1.75□□□□□ -2.13
CCDC85CA6NKD9 AC090844.1-201ENST00000422019 156 ntBASIC1.75□□□□□ -2.13
CCDC85CA6NKD9 RN7SKP19-201ENST00000516016 252 ntBASIC1.75□□□□□ -2.13
CCDC85CA6NKD9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC85CA6NKD9 IGKV1-22-201ENST00000524313 326 ntBASIC1.75□□□□□ -2.13
CCDC85CA6NKD9 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
CCDC85CA6NKD9 AC021443.1-201ENST00000604478 211 ntBASIC1.75□□□□□ -2.13
CCDC85CA6NKD9 AP000648.3-201ENST00000623539 4507 ntBASIC1.74□□□□□ -2.13
CCDC85CA6NKD9 Y_RNA.71-201ENST00000362892 104 ntBASIC1.74□□□□□ -2.13
CCDC85CA6NKD9 RNU4-16P-201ENST00000364737 141 ntBASIC1.74□□□□□ -2.13
CCDC85CA6NKD9 RNU5E-3P-201ENST00000515913 68 ntBASIC1.74□□□□□ -2.13
CCDC85CA6NKD9 RN7SKP179-201ENST00000516126 217 ntBASIC1.74□□□□□ -2.13
CCDC85CA6NKD9 SNORD115-2-201ENST00000362842 82 ntBASIC1.73□□□□□ -2.13
CCDC85CA6NKD9 SNORD115-20-201ENST00000365099 82 ntBASIC1.73□□□□□ -2.13
CCDC85CA6NKD9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.73□□□□□ -2.13
CCDC85CA6NKD9 SNORD38B-201ENST00000384690 67 ntBASIC1.73□□□□□ -2.13
CCDC85CA6NKD9 RNA5SP136-201ENST00000410906 107 ntBASIC1.73□□□□□ -2.13
CCDC85CA6NKD9 Y_RNA.712-201ENST00000517011 92 ntBASIC1.73□□□□□ -2.13
CCDC85CA6NKD9 AC036111.3-201ENST00000526389 112 ntBASIC1.73□□□□□ -2.13
CCDC85CA6NKD9 SEPT14P17-201ENST00000617978 177 ntBASIC1.73□□□□□ -2.13
CCDC85CA6NKD9 SNORD38B-202ENST00000625943 69 ntBASIC1.73□□□□□ -2.13
CCDC85CA6NKD9 MIR6516-201ENST00000630554 81 ntBASIC1.73□□□□□ -2.13
CCDC85CA6NKD9 Y_RNA.127-201ENST00000363386 109 ntBASIC1.72□□□□□ -2.13
CCDC85CA6NKD9 Y_RNA.298-201ENST00000364960 107 ntBASIC1.72□□□□□ -2.13
CCDC85CA6NKD9 SNORD26-201ENST00000384147 75 ntBASIC1.72□□□□□ -2.13
CCDC85CA6NKD9 RNU6-1117P-201ENST00000384525 104 ntBASIC1.72□□□□□ -2.13
CCDC85CA6NKD9 AL022718.1-201ENST00000412004 84 ntBASIC1.72□□□□□ -2.13
CCDC85CA6NKD9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.72□□□□□ -2.13
CCDC85CA6NKD9 RNU2-35P-201ENST00000516446 142 ntBASIC1.72□□□□□ -2.13
CCDC85CA6NKD9 RNU6-659P-201ENST00000516454 104 ntBASIC1.72□□□□□ -2.13
CCDC85CA6NKD9 MIR4264-201ENST00000583520 66 ntBASIC1.72□□□□□ -2.13
CCDC85CA6NKD9 AL157777.2-201ENST00000258070 137 ntBASIC1.71□□□□□ -2.14
CCDC85CA6NKD9 RNU6-235P-201ENST00000362644 107 ntBASIC1.71□□□□□ -2.14
CCDC85CA6NKD9 SNORD58C-201ENST00000365223 64 ntBASIC1.71□□□□□ -2.14
CCDC85CA6NKD9 SNORD12-201ENST00000391002 90 ntBASIC1.71□□□□□ -2.14
CCDC85CA6NKD9 AC008267.6-201ENST00000441664 139 ntBASIC1.71□□□□□ -2.14
CCDC85CA6NKD9 AC012493.3-201ENST00000604494 112 ntBASIC1.71□□□□□ -2.14
CCDC85CA6NKD9 AC244023.1-201ENST00000426884 112 ntBASIC1.7□□□□□ -2.14
CCDC85CA6NKD9 RNU7-164P-201ENST00000459221 62 ntBASIC1.7□□□□□ -2.14
CCDC85CA6NKD9 RNU7-123P-201ENST00000515911 60 ntBASIC1.7□□□□□ -2.14
CCDC85CA6NKD9 RNU6-772P-201ENST00000516042 105 ntBASIC1.7□□□□□ -2.14
CCDC85CA6NKD9 SNORD79.1-201ENST00000516069 84 ntBASIC1.7□□□□□ -2.14
CCDC85CA6NKD9 AC242498.1-201ENST00000604134 111 ntBASIC1.7□□□□□ -2.14
CCDC85CA6NKD9 RNU6-580P-201ENST00000365159 107 ntBASIC1.69□□□□□ -2.14
CCDC85CA6NKD9 RNU6-22P-201ENST00000384355 107 ntBASIC1.69□□□□□ -2.14
CCDC85CA6NKD9 SNORA80D-201ENST00000384488 135 ntBASIC1.69□□□□□ -2.14
CCDC85CA6NKD9 RNU6-35P-201ENST00000384530 107 ntBASIC1.69□□□□□ -2.14
CCDC85CA6NKD9 AC113410.1-201ENST00000505029 247 ntBASIC1.69□□□□□ -2.14
CCDC85CA6NKD9 RNU6-479P-201ENST00000516348 105 ntBASIC1.69□□□□□ -2.14
CCDC85CA6NKD9 RNY4P20-201ENST00000516678 93 ntBASIC1.69□□□□□ -2.14
CCDC85CA6NKD9 RNU6-1234P-201ENST00000516877 103 ntBASIC1.69□□□□□ -2.14
CCDC85CA6NKD9 RNU6-1258P-201ENST00000516911 111 ntBASIC1.69□□□□□ -2.14
CCDC85CA6NKD9 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms