Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 RNU1-48P-201ENST00000516400 162 ntBASIC2.19□□□□□ -2.06
ZNF394Q53GI3 IGKV3-31-201ENST00000523109 329 ntBASIC2.19□□□□□ -2.06
ZNF394Q53GI3 AC008133.2-201ENST00000624540 351 ntBASIC2.19□□□□□ -2.06
ZNF394Q53GI3 MIR219B-201ENST00000637023 88 ntBASIC2.19□□□□□ -2.06
ZNF394Q53GI3 Y_RNA.291-201ENST00000364886 113 ntBASIC2.18□□□□□ -2.06
ZNF394Q53GI3 Y_RNA.294-201ENST00000364916 102 ntBASIC2.18□□□□□ -2.06
ZNF394Q53GI3 RNU6-690P-201ENST00000365242 106 ntBASIC2.18□□□□□ -2.06
ZNF394Q53GI3 RNU6-1154P-201ENST00000391001 104 ntBASIC2.18□□□□□ -2.06
ZNF394Q53GI3 Y_RNA.617-201ENST00000410920 90 ntBASIC2.18□□□□□ -2.06
ZNF394Q53GI3 RNU2-11P-201ENST00000459191 187 ntBASIC2.18□□□□□ -2.06
ZNF394Q53GI3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.18□□□□□ -2.06
ZNF394Q53GI3 RNU6-1333P-201ENST00000516162 93 ntBASIC2.18□□□□□ -2.06
ZNF394Q53GI3 SNORD111.1-201ENST00000516421 86 ntBASIC2.18□□□□□ -2.06
ZNF394Q53GI3 RNU6-659P-201ENST00000516454 104 ntBASIC2.18□□□□□ -2.06
ZNF394Q53GI3 SNRPGP19-201ENST00000603826 189 ntBASIC2.18□□□□□ -2.06
ZNF394Q53GI3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ZNF394Q53GI3 MIR342-201ENST00000362212 99 ntBASIC2.17□□□□□ -2.06
ZNF394Q53GI3 RNU6-349P-201ENST00000362402 107 ntBASIC2.17□□□□□ -2.06
ZNF394Q53GI3 RNA5SP48-201ENST00000363969 126 ntBASIC2.17□□□□□ -2.06
ZNF394Q53GI3 SNORD41-201ENST00000386967 70 ntBASIC2.17□□□□□ -2.06
ZNF394Q53GI3 RNA5SP489-201ENST00000410986 109 ntBASIC2.17□□□□□ -2.06
ZNF394Q53GI3 RNU6-893P-201ENST00000458841 100 ntBASIC2.17□□□□□ -2.06
ZNF394Q53GI3 snoU13.16-201ENST00000459350 104 ntBASIC2.17□□□□□ -2.06
ZNF394Q53GI3 RNU6-922P-201ENST00000516753 99 ntBASIC2.17□□□□□ -2.06
ZNF394Q53GI3 RNU6-1234P-201ENST00000516877 103 ntBASIC2.17□□□□□ -2.06
ZNF394Q53GI3 Y_RNA.712-201ENST00000517011 92 ntBASIC2.17□□□□□ -2.06
ZNF394Q53GI3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ZNF394Q53GI3 RNU6-508P-201ENST00000363231 103 ntBASIC2.16□□□□□ -2.06
ZNF394Q53GI3 SNORD1A-201ENST00000364968 72 ntBASIC2.16□□□□□ -2.06
ZNF394Q53GI3 AC005908.1-201ENST00000468701 347 ntBASIC2.16□□□□□ -2.06
ZNF394Q53GI3 RPL30P7-201ENST00000479312 323 ntBASIC2.16□□□□□ -2.06
ZNF394Q53GI3 RNU6-958P-201ENST00000516995 106 ntBASIC2.16□□□□□ -2.06
ZNF394Q53GI3 DNAJC19P9-201ENST00000555084 351 ntBASIC2.16□□□□□ -2.06
ZNF394Q53GI3 AL365222.1-201ENST00000614661 98 ntBASIC2.16□□□□□ -2.06
ZNF394Q53GI3 AC025033.1-201ENST00000463883 194 ntBASIC2.15□□□□□ -2.07
ZNF394Q53GI3 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
ZNF394Q53GI3 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
ZNF394Q53GI3 AC133485.4-201ENST00000561835 220 ntBASIC2.15□□□□□ -2.07
ZNF394Q53GI3 AC138907.4-201ENST00000570107 226 ntBASIC2.15□□□□□ -2.07
ZNF394Q53GI3 MIR3152-201ENST00000579801 74 ntBASIC2.15□□□□□ -2.07
ZNF394Q53GI3 MIR3683-201ENST00000580847 82 ntBASIC2.15□□□□□ -2.07
ZNF394Q53GI3 MIR4422-201ENST00000581938 83 ntBASIC2.15□□□□□ -2.07
ZNF394Q53GI3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.15□□□□□ -2.07
ZNF394Q53GI3 AC012493.3-201ENST00000604494 112 ntBASIC2.15□□□□□ -2.07
ZNF394Q53GI3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
ZNF394Q53GI3 RNU6-235P-201ENST00000362644 107 ntBASIC2.14□□□□□ -2.07
ZNF394Q53GI3 RNA5SP205-201ENST00000364653 136 ntBASIC2.14□□□□□ -2.07
ZNF394Q53GI3 MIR934-201ENST00000401241 83 ntBASIC2.14□□□□□ -2.07
ZNF394Q53GI3 RNA5SP136-201ENST00000410906 107 ntBASIC2.14□□□□□ -2.07
ZNF394Q53GI3 AC027119.1-201ENST00000440877 241 ntBASIC2.14□□□□□ -2.07
ZNF394Q53GI3 RPL39P39-201ENST00000455840 151 ntBASIC2.14□□□□□ -2.07
ZNF394Q53GI3 RNU6-717P-201ENST00000459076 104 ntBASIC2.14□□□□□ -2.07
ZNF394Q53GI3 RN7SKP19-201ENST00000516016 252 ntBASIC2.14□□□□□ -2.07
ZNF394Q53GI3 RNU6-772P-201ENST00000516042 105 ntBASIC2.14□□□□□ -2.07
ZNF394Q53GI3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.14□□□□□ -2.07
ZNF394Q53GI3 MIR5089-201ENST00000580047 84 ntBASIC2.14□□□□□ -2.07
ZNF394Q53GI3 AL137067.1-201ENST00000615933 120 ntBASIC2.14□□□□□ -2.07
ZNF394Q53GI3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ZNF394Q53GI3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ZNF394Q53GI3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.13□□□□□ -2.07
ZNF394Q53GI3 Y_RNA.563-201ENST00000384707 108 ntBASIC2.13□□□□□ -2.07
ZNF394Q53GI3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ZNF394Q53GI3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ZNF394Q53GI3 AC245517.4-201ENST00000448601 281 ntBASIC2.13□□□□□ -2.07
ZNF394Q53GI3 RNU6-240P-201ENST00000516098 97 ntBASIC2.13□□□□□ -2.07
ZNF394Q53GI3 AC021613.1-201ENST00000623880 111 ntBASIC2.13□□□□□ -2.07
ZNF394Q53GI3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
ZNF394Q53GI3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ZNF394Q53GI3 SNORD58C-201ENST00000365223 64 ntBASIC2.12□□□□□ -2.07
ZNF394Q53GI3 RNU6-1319P-201ENST00000390855 104 ntBASIC2.12□□□□□ -2.07
ZNF394Q53GI3 RNU6-747P-201ENST00000390928 104 ntBASIC2.12□□□□□ -2.07
ZNF394Q53GI3 RNU6-241P-201ENST00000391148 104 ntBASIC2.12□□□□□ -2.07
ZNF394Q53GI3 RNU1-78P-201ENST00000391248 165 ntBASIC2.12□□□□□ -2.07
ZNF394Q53GI3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.12□□□□□ -2.07
ZNF394Q53GI3 RNU6-177P-201ENST00000411257 104 ntBASIC2.12□□□□□ -2.07
ZNF394Q53GI3 RPL31P63-201ENST00000422565 375 ntBASIC2.12□□□□□ -2.07
ZNF394Q53GI3 RNA5SP364-201ENST00000516938 78 ntBASIC2.12□□□□□ -2.07
ZNF394Q53GI3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
ZNF394Q53GI3 MIR3937-201ENST00000580135 106 ntBASIC2.12□□□□□ -2.07
ZNF394Q53GI3 AC108081.1-201ENST00000604358 221 ntBASIC2.12□□□□□ -2.07
ZNF394Q53GI3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.12□□□□□ -2.07
ZNF394Q53GI3 MIR4251-201ENST00000635819 61 ntBASIC2.12□□□□□ -2.07
ZNF394Q53GI3 U6.95-201ENST00000636931 70 ntBASIC2.12□□□□□ -2.07
ZNF394Q53GI3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
ZNF394Q53GI3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
ZNF394Q53GI3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
ZNF394Q53GI3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
ZNF394Q53GI3 SNORA22C-201ENST00000384614 134 ntBASIC2.11□□□□□ -2.07
ZNF394Q53GI3 snoU13.26-201ENST00000459452 105 ntBASIC2.11□□□□□ -2.07
ZNF394Q53GI3 RNU6-1061P-201ENST00000516530 99 ntBASIC2.11□□□□□ -2.07
ZNF394Q53GI3 AL359881.1-201ENST00000602916 267 ntBASIC2.11□□□□□ -2.07
ZNF394Q53GI3 MIR3914-2-201ENST00000637339 95 ntBASIC2.11□□□□□ -2.07
ZNF394Q53GI3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.1□□□□□ -2.07
ZNF394Q53GI3 RNU6-834P-201ENST00000362367 110 ntBASIC2.1□□□□□ -2.07
ZNF394Q53GI3 Y_RNA.346-201ENST00000365385 112 ntBASIC2.1□□□□□ -2.07
ZNF394Q53GI3 Y_RNA.366-201ENST00000365540 102 ntBASIC2.1□□□□□ -2.07
ZNF394Q53GI3 MIR570-201ENST00000384917 97 ntBASIC2.1□□□□□ -2.07
ZNF394Q53GI3 RNU7-107P-201ENST00000459121 61 ntBASIC2.1□□□□□ -2.07
ZNF394Q53GI3 RNA5SP445-201ENST00000515889 115 ntBASIC2.1□□□□□ -2.07
ZNF394Q53GI3 AC021443.1-201ENST00000604478 211 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms