Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 AC243994.1-201ENST00000618627 109 ntBASIC1.53□□□□□ -2.16
RRP9O43818 RNA5SP48-201ENST00000363969 126 ntBASIC1.52□□□□□ -2.17
RRP9O43818 Y_RNA.488-201ENST00000384403 102 ntBASIC1.52□□□□□ -2.17
RRP9O43818 Y_RNA.506-201ENST00000384494 102 ntBASIC1.52□□□□□ -2.17
RRP9O43818 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.52□□□□□ -2.17
RRP9O43818 RPS29P29-201ENST00000456396 171 ntBASIC1.52□□□□□ -2.17
RRP9O43818 RNU7-80P-201ENST00000459562 61 ntBASIC1.52□□□□□ -2.17
RRP9O43818 RNU7-41P-201ENST00000515917 61 ntBASIC1.52□□□□□ -2.17
RRP9O43818 SNORA25.12-201ENST00000516202 82 ntBASIC1.52□□□□□ -2.17
RRP9O43818 AL096861.1-201ENST00000610899 123 ntBASIC1.52□□□□□ -2.17
RRP9O43818 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
RRP9O43818 Y_RNA.351-201ENST00000365436 96 ntBASIC1.51□□□□□ -2.17
RRP9O43818 SNORA24-201ENST00000384096 131 ntBASIC1.51□□□□□ -2.17
RRP9O43818 Y_RNA.454-201ENST00000384224 113 ntBASIC1.51□□□□□ -2.17
RRP9O43818 RNU7-67P-201ENST00000459003 62 ntBASIC1.51□□□□□ -2.17
RRP9O43818 snoU13.15-201ENST00000459407 104 ntBASIC1.51□□□□□ -2.17
RRP9O43818 RNU6-998P-201ENST00000515894 101 ntBASIC1.51□□□□□ -2.17
RRP9O43818 Y_RNA.703-201ENST00000516846 111 ntBASIC1.51□□□□□ -2.17
RRP9O43818 RN7SKP88-201ENST00000516847 250 ntBASIC1.51□□□□□ -2.17
RRP9O43818 SCARNA15-202ENST00000516881 127 ntBASIC1.51□□□□□ -2.17
RRP9O43818 RNU7-70P-201ENST00000516941 66 ntBASIC1.51□□□□□ -2.17
RRP9O43818 7SK.8-201ENST00000612110 250 ntBASIC1.51□□□□□ -2.17
RRP9O43818 7SK.11-201ENST00000615477 250 ntBASIC1.51□□□□□ -2.17
RRP9O43818 7SK.13-201ENST00000622040 250 ntBASIC1.51□□□□□ -2.17
RRP9O43818 MIR4251-201ENST00000635819 61 ntBASIC1.51□□□□□ -2.17
RRP9O43818 MTND5P32-201ENST00000560711 1802 ntBASIC1.51□□□□□ -2.17
RRP9O43818 Y_RNA.251-201ENST00000364551 99 ntBASIC1.5□□□□□ -2.17
RRP9O43818 RNU6-746P-201ENST00000384112 109 ntBASIC1.5□□□□□ -2.17
RRP9O43818 MIR569-201ENST00000385228 96 ntBASIC1.5□□□□□ -2.17
RRP9O43818 AL035398.1-201ENST00000430869 322 ntBASIC1.5□□□□□ -2.17
RRP9O43818 RNU7-197P-201ENST00000458836 62 ntBASIC1.5□□□□□ -2.17
RRP9O43818 RNU7-53P-201ENST00000516705 60 ntBASIC1.5□□□□□ -2.17
RRP9O43818 RNU6-165P-201ENST00000517170 99 ntBASIC1.5□□□□□ -2.17
RRP9O43818 MIR3192-201ENST00000584920 77 ntBASIC1.5□□□□□ -2.17
RRP9O43818 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.5□□□□□ -2.17
RRP9O43818 MIR342-201ENST00000362212 99 ntBASIC1.49□□□□□ -2.17
RRP9O43818 Y_RNA.343-201ENST00000365354 112 ntBASIC1.49□□□□□ -2.17
RRP9O43818 SNORD18B-201ENST00000365659 72 ntBASIC1.49□□□□□ -2.17
RRP9O43818 RNU6-125P-201ENST00000384505 107 ntBASIC1.49□□□□□ -2.17
RRP9O43818 MIR504-201ENST00000385065 83 ntBASIC1.49□□□□□ -2.17
RRP9O43818 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.49□□□□□ -2.17
RRP9O43818 MTATP6P21-201ENST00000440681 189 ntBASIC1.49□□□□□ -2.17
RRP9O43818 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.49□□□□□ -2.17
RRP9O43818 RNU6-958P-201ENST00000516995 106 ntBASIC1.49□□□□□ -2.17
RRP9O43818 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
RRP9O43818 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.49□□□□□ -2.17
RRP9O43818 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.48□□□□□ -2.17
RRP9O43818 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RRP9O43818 Y_RNA.120-201ENST00000363304 110 ntBASIC1.48□□□□□ -2.17
RRP9O43818 RNY1P11-201ENST00000363759 113 ntBASIC1.48□□□□□ -2.17
RRP9O43818 MIR9-3-201ENST00000385084 90 ntBASIC1.48□□□□□ -2.17
RRP9O43818 MIR548M-201ENST00000408260 86 ntBASIC1.48□□□□□ -2.17
RRP9O43818 MRPL35P3-201ENST00000421557 364 ntBASIC1.48□□□□□ -2.17
RRP9O43818 snoU13.16-201ENST00000459350 104 ntBASIC1.48□□□□□ -2.17
RRP9O43818 RNU6-346P-201ENST00000516288 111 ntBASIC1.48□□□□□ -2.17
RRP9O43818 CYP3A52P-201ENST00000563326 91 ntBASIC1.48□□□□□ -2.17
RRP9O43818 MIR3133-201ENST00000583157 78 ntBASIC1.48□□□□□ -2.17
RRP9O43818 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.48□□□□□ -2.17
RRP9O43818 MIR302B-201ENST00000362188 73 ntBASIC1.47□□□□□ -2.17
RRP9O43818 RNU6-774P-201ENST00000363238 107 ntBASIC1.47□□□□□ -2.17
RRP9O43818 RNU1-133P-201ENST00000364867 167 ntBASIC1.47□□□□□ -2.17
RRP9O43818 RNU6-460P-201ENST00000391158 108 ntBASIC1.47□□□□□ -2.17
RRP9O43818 RNU7-73P-201ENST00000458743 63 ntBASIC1.47□□□□□ -2.17
RRP9O43818 RNU2-11P-201ENST00000459191 187 ntBASIC1.47□□□□□ -2.17
RRP9O43818 RNU6-295P-201ENST00000516901 104 ntBASIC1.47□□□□□ -2.17
RRP9O43818 AC091932.4-201ENST00000623386 200 ntBASIC1.47□□□□□ -2.17
RRP9O43818 U8.1-201ENST00000362843 134 ntBASIC1.46□□□□□ -2.18
RRP9O43818 Y_RNA.420-201ENST00000384043 110 ntBASIC1.46□□□□□ -2.18
RRP9O43818 AL133373.1-201ENST00000497098 94 ntBASIC1.46□□□□□ -2.18
RRP9O43818 RNA5SP236-201ENST00000516169 116 ntBASIC1.46□□□□□ -2.18
RRP9O43818 RNU6-426P-201ENST00000516464 97 ntBASIC1.46□□□□□ -2.18
RRP9O43818 AC104984.5-201ENST00000586878 94 ntBASIC1.46□□□□□ -2.18
RRP9O43818 AL596211.1-201ENST00000569873 2277 ntBASIC1.46□□□□□ -2.18
RRP9O43818 MIR1285-1-201ENST00000408593 84 ntBASIC1.45□□□□□ -2.18
RRP9O43818 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.45□□□□□ -2.18
RRP9O43818 SUMO1P3-201ENST00000439961 304 ntBASIC1.45□□□□□ -2.18
RRP9O43818 AC003989.2-201ENST00000440224 169 ntBASIC1.45□□□□□ -2.18
RRP9O43818 RNU6-548P-201ENST00000517083 115 ntBASIC1.45□□□□□ -2.18
RRP9O43818 RNU2-60P-201ENST00000517290 128 ntBASIC1.45□□□□□ -2.18
RRP9O43818 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.45□□□□□ -2.18
RRP9O43818 AL603914.1-201ENST00000401964 204 ntBASIC1.44□□□□□ -2.18
RRP9O43818 AL603908.1-201ENST00000406098 201 ntBASIC1.44□□□□□ -2.18
RRP9O43818 RNU6-1054P-201ENST00000411293 104 ntBASIC1.44□□□□□ -2.18
RRP9O43818 AC009474.2-201ENST00000451383 136 ntBASIC1.44□□□□□ -2.18
RRP9O43818 snoU13.25-201ENST00000458945 104 ntBASIC1.44□□□□□ -2.18
RRP9O43818 Y_RNA.686-201ENST00000516548 134 ntBASIC1.44□□□□□ -2.18
RRP9O43818 AP001328.1-201ENST00000528550 176 ntBASIC1.44□□□□□ -2.18
RRP9O43818 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.44□□□□□ -2.18
RRP9O43818 MIR8065-201ENST00000620577 100 ntBASIC1.44□□□□□ -2.18
RRP9O43818 SNORA25.3-201ENST00000363205 127 ntBASIC1.43□□□□□ -2.18
RRP9O43818 RNU6-915P-201ENST00000364943 103 ntBASIC1.43□□□□□ -2.18
RRP9O43818 Y_RNA.568-201ENST00000384742 113 ntBASIC1.43□□□□□ -2.18
RRP9O43818 MIR618-201ENST00000385287 98 ntBASIC1.43□□□□□ -2.18
RRP9O43818 U8.13-201ENST00000390842 128 ntBASIC1.43□□□□□ -2.18
RRP9O43818 RNU6-913P-201ENST00000390913 95 ntBASIC1.43□□□□□ -2.18
RRP9O43818 SNORA40.18-201ENST00000391200 128 ntBASIC1.43□□□□□ -2.18
RRP9O43818 SNORA26.9-201ENST00000391322 122 ntBASIC1.43□□□□□ -2.18
RRP9O43818 AC245047.7-201ENST00000440265 293 ntBASIC1.43□□□□□ -2.18
RRP9O43818 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.43□□□□□ -2.18
RRP9O43818 Y_RNA.690-201ENST00000516603 95 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 247 ms