Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 TSPY23P-201ENST00000440136 739 ntBASIC16.56■□□□□ 0.24
CDH20Q9HBT6 RBM17P1-201ENST00000453646 1190 ntBASIC16.56■□□□□ 0.24
CDH20Q9HBT6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH20Q9HBT6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.56■□□□□ 0.24
CDH20Q9HBT6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.56■□□□□ 0.24
CDH20Q9HBT6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.56■□□□□ 0.24
CDH20Q9HBT6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CDH20Q9HBT6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH20Q9HBT6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH20Q9HBT6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH20Q9HBT6 AC141586.3-201ENST00000562166 1838 ntBASIC16.56■□□□□ 0.24
CDH20Q9HBT6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH20Q9HBT6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDH20Q9HBT6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH20Q9HBT6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH20Q9HBT6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CDH20Q9HBT6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 CRYGFP-201ENST00000418459 633 ntBASIC16.55■□□□□ 0.24
CDH20Q9HBT6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 AC008040.2-201ENST00000461049 708 ntBASIC16.55■□□□□ 0.24
CDH20Q9HBT6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDH20Q9HBT6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 KRT8P11-201ENST00000409686 1436 ntBASIC16.54■□□□□ 0.24
CDH20Q9HBT6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 AP000525.1-201ENST00000608286 694 ntBASIC16.54■□□□□ 0.24
CDH20Q9HBT6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH20Q9HBT6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH20Q9HBT6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms