Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 AC092647.4-201ENST00000457211 535 ntBASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 COX11P1-201ENST00000489116 835 ntBASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 YBX1P2-201ENST00000489612 999 ntBASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 HCG11-201ENST00000411553 5696 ntBASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SNAP47Q5SQN1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 ZNF815P-204ENST00000434898 1737 ntBASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 AC104417.2-201ENST00000562989 1793 ntBASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 AFG3L1P-217ENST00000557444 2447 ntBASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 RNF152P1-201ENST00000397754 604 ntBASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 LINC01238-205ENST00000567549 1107 ntBASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.38■□□□□ 0.53
SNAP47Q5SQN1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 CA15P1-201ENST00000481698 905 ntBASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 AC140113.3-201ENST00000605663 199 ntBASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SNAP47Q5SQN1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 AC063952.2-201ENST00000498792 1227 ntBASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 PRSS44-201ENST00000515154 1146 ntBASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNAP47Q5SQN1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms