Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 FAM207BP-201ENST00000447172 505 ntBASIC18.31■□□□□ 0.52
KRT78Q8N1N4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 AC130371.2-201ENST00000619443 611 ntBASIC18.31■□□□□ 0.52
KRT78Q8N1N4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 AC087289.5-201ENST00000586076 3175 ntBASIC18.31■□□□□ 0.52
KRT78Q8N1N4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 KRT8P11-201ENST00000409686 1436 ntBASIC18.31■□□□□ 0.52
KRT78Q8N1N4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
KRT78Q8N1N4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 AL049812.1-201ENST00000432563 2267 ntBASIC18.3■□□□□ 0.52
KRT78Q8N1N4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 B3GAT3P1-201ENST00000471720 806 ntBASIC18.3■□□□□ 0.52
KRT78Q8N1N4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 AC113410.3-201ENST00000623366 203 ntBASIC18.3■□□□□ 0.52
KRT78Q8N1N4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT78Q8N1N4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 AC098818.2-201ENST00000564925 2320 ntBASIC18.29■□□□□ 0.52
KRT78Q8N1N4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 AC008550.1-201ENST00000511500 884 ntBASIC18.29■□□□□ 0.52
KRT78Q8N1N4 NUDT16P1-203ENST00000513809 620 ntBASIC18.29■□□□□ 0.52
KRT78Q8N1N4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT78Q8N1N4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms